| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is phoU [H]
Identifier: 83310470
GI number: 83310470
Start: 1487531
End: 1488226
Strand: Reverse
Name: phoU [H]
Synonym: amb1371
Alternate gene names: 83310470
Gene position: 1488226-1487531 (Counterclockwise)
Preceding gene: 83310471
Following gene: 83310469
Centisome position: 29.96
GC content: 64.37
Gene sequence:
>696_bases TTGAGCGAGCACACAGTCAAATCCTACGACGACGAACTGGCCCACCTGTCGGGCATGATCGCCCGCATGGGCGGGCTGGC CGAGGCCCAGTTGGGATCGGCGCTGCAATCCCTGGCCCGGCGCGACGACGATCTGGCCCACAAAGTGGTGGACAGCGATC ACCGCATCGACGAACTGGACGCCGAGGTGGACAGCTTCGCCGTGCGCCTGCTGGCGCTGCGCCAGCCCATGGCCGGCGAC CTGCGCCACATCGTCGCGGCGCTGAACATCTCGGGCGAGATCGAGCGGGTCGGCGACTATGCCGCCAATCTGGCCAAGCG CGCCCTGGTGCTCAACCAGCTTCCCGCCACCGCCAAGACCATCGGTGTGGTCCGCCTGGGCGAGTTGGTGCAGGCCTTGC TGAAGGACATCCTCGACGCCTATGTGGACAGGGACCTGGACAAGGCCATCCGCGTCTGGGAGCGCGACGAGGAGGTAGAT TCCCTTTATAATACCGTCTTCCGTGACCTGATCGCCCAGATGAACGAGGATTCCGGCACCATCACCGCATCGACCCATCT GCTGTTCATCGCCAAGAACATGGAACGCATCGGCGATCACGCCACCAACATCGCCGAGACCCTGCACTTCCAGATTCTCG GCACCCAGCCCAAGGGCAACCGGCCCAAGGGCGTGACCCTCGGAGCCCAGGAATAA
Upstream 100 bases:
>100_bases CTTCAGCCTAAGACGGCGGCACATTTCGCCTGAAAGACCCTTCGCCTTCGGCTCAGGGTGACAGGCGGAAGAGGCCCCGG CGATTAAGGGACGAACAGAC
Downstream 100 bases:
>100_bases TGACCGCCCGCGAGACCGCCAATCCTTCCAAGCCTCTTGTCCTGGTCGTCGAGGATGAAGCGGCGCTGGCCACCATGCTG CGCTACAACCTGGAAAAGGA
Product: phosphate uptake regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSEHTVKSYDDELAHLSGMIARMGGLAEAQLGSALQSLARRDDDLAHKVVDSDHRIDELDAEVDSFAVRLLALRQPMAGD LRHIVAALNISGEIERVGDYAANLAKRALVLNQLPATAKTIGVVRLGELVQALLKDILDAYVDRDLDKAIRVWERDEEVD SLYNTVFRDLIAQMNEDSGTITASTHLLFIAKNMERIGDHATNIAETLHFQILGTQPKGNRPKGVTLGAQE
Sequences:
>Translated_231_residues MSEHTVKSYDDELAHLSGMIARMGGLAEAQLGSALQSLARRDDDLAHKVVDSDHRIDELDAEVDSFAVRLLALRQPMAGD LRHIVAALNISGEIERVGDYAANLAKRALVLNQLPATAKTIGVVRLGELVQALLKDILDAYVDRDLDKAIRVWERDEEVD SLYNTVFRDLIAQMNEDSGTITASTHLLFIAKNMERIGDHATNIAETLHFQILGTQPKGNRPKGVTLGAQE >Mature_230_residues SEHTVKSYDDELAHLSGMIARMGGLAEAQLGSALQSLARRDDDLAHKVVDSDHRIDELDAEVDSFAVRLLALRQPMAGDL RHIVAALNISGEIERVGDYAANLAKRALVLNQLPATAKTIGVVRLGELVQALLKDILDAYVDRDLDKAIRVWERDEEVDS LYNTVFRDLIAQMNEDSGTITASTHLLFIAKNMERIGDHATNIAETLHFQILGTQPKGNRPKGVTLGAQE
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=214, Percent_Identity=32.7102803738318, Blast_Score=138, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25387; Mature: 25256
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHTVKSYDDELAHLSGMIARMGGLAEAQLGSALQSLARRDDDLAHKVVDSDHRIDELD CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH AEVDSFAVRLLALRQPMAGDLRHIVAALNISGEIERVGDYAANLAKRALVLNQLPATAKT HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH IGVVRLGELVQALLKDILDAYVDRDLDKAIRVWERDEEVDSLYNTVFRDLIAQMNEDSGT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCE ITASTHLLFIAKNMERIGDHATNIAETLHFQILGTQPKGNRPKGVTLGAQE EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure SEHTVKSYDDELAHLSGMIARMGGLAEAQLGSALQSLARRDDDLAHKVVDSDHRIDELD CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHH AEVDSFAVRLLALRQPMAGDLRHIVAALNISGEIERVGDYAANLAKRALVLNQLPATAKT HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH IGVVRLGELVQALLKDILDAYVDRDLDKAIRVWERDEEVDSLYNTVFRDLIAQMNEDSGT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCE ITASTHLLFIAKNMERIGDHATNIAETLHFQILGTQPKGNRPKGVTLGAQE EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10629178 [H]