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The map label for this gene is sgaR [H]

Identifier: 83310354

GI number: 83310354

Start: 1338069

End: 1338698

Strand: Reverse

Name: sgaR [H]

Synonym: amb1255

Alternate gene names: 83310354

Gene position: 1338698-1338069 (Counterclockwise)

Preceding gene: 83310355

Following gene: 83310353

Centisome position: 26.95

GC content: 64.92

Gene sequence:

>630_bases
ATGGCCGTGCAGCAGAGCCGACCGATCGTCATTGTCATCGCCGAAAAGAATCCGCTGCTGCAAAGCAGCCTGATTAAGCT
GTTCTCGGGCGACGACCGCTTCACCGTCGCCGCGGTGACCAGCGATGGCGAGCGCTTTATCGAAGCCGTGGAAAAGACCC
CCTTCGACGTGGGTATCATTGGGTGGGAGATGCCCTACCTGGACGGGCGCGGGGTTCTGCAGACCCTGCGGACCCGCGTA
GATGCCCCCCGCCTGATCGTCTATACCGGCAGCCCCAACCCCGATGTACCGCGCCAGGCCATGACGCTGGGCGCCGCCGG
GTTCTGCTCCAAGCGCGAACCGCCCGAGCAATTGCTCGACACCATCATCGCCGTGGCCGCCGGGCGCATGGTGTTTCCGT
TCATCGACGTGTCCTCCCTGGCCAGCGACCCGCTGGCCGGCCTGACCCCGCGCGAGCGCGAGTTGCTGGCCGCCCTGGCC
GGCGGCCTGACCAACCAGCAGATGGCAGGGCAATTGGATATTTCACTCAACACCGTGAAGTTCCACCTGAAGAACCTTTA
CGACAAGCTGGGCGTCGGCAATCGCGCCCAGGCGGTGGCCTTCTACCTCAAGGGACGCGAGTCCCGCTGA

Upstream 100 bases:

>100_bases
TTTTTGCACAAACGGTAAGATCACGGCCTCAGAAGGGTGGGGTCCATGGCTCGACCTAGGGGCTGGACCTAGGGACTTCT
GGGGGGAAGGATCAGGATCA

Downstream 100 bases:

>100_bases
CCCCCCTGCCCCTTTTGGTCATGCCCTCACCTTCGGAAGGGGCATAGCCGAGGGTTCGAACCTCGGGCATACTGCCGGTA
TCGGTTGAGGCGCCGCCGCC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MAVQQSRPIVIVIAEKNPLLQSSLIKLFSGDDRFTVAAVTSDGERFIEAVEKTPFDVGIIGWEMPYLDGRGVLQTLRTRV
DAPRLIVYTGSPNPDVPRQAMTLGAAGFCSKREPPEQLLDTIIAVAAGRMVFPFIDVSSLASDPLAGLTPRERELLAALA
GGLTNQQMAGQLDISLNTVKFHLKNLYDKLGVGNRAQAVAFYLKGRESR

Sequences:

>Translated_209_residues
MAVQQSRPIVIVIAEKNPLLQSSLIKLFSGDDRFTVAAVTSDGERFIEAVEKTPFDVGIIGWEMPYLDGRGVLQTLRTRV
DAPRLIVYTGSPNPDVPRQAMTLGAAGFCSKREPPEQLLDTIIAVAAGRMVFPFIDVSSLASDPLAGLTPRERELLAALA
GGLTNQQMAGQLDISLNTVKFHLKNLYDKLGVGNRAQAVAFYLKGRESR
>Mature_208_residues
AVQQSRPIVIVIAEKNPLLQSSLIKLFSGDDRFTVAAVTSDGERFIEAVEKTPFDVGIIGWEMPYLDGRGVLQTLRTRVD
APRLIVYTGSPNPDVPRQAMTLGAAGFCSKREPPEQLLDTIIAVAAGRMVFPFIDVSSLASDPLAGLTPRERELLAALAG
GLTNQQMAGQLDISLNTVKFHLKNLYDKLGVGNRAQAVAFYLKGRESR

Specific function: Not known. Could act on the sgaA gene expression [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=210, Percent_Identity=30.952380952381, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787473, Length=209, Percent_Identity=31.1004784688995, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786747, Length=202, Percent_Identity=23.2673267326733, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790102, Length=189, Percent_Identity=29.1005291005291, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788712, Length=184, Percent_Identity=28.804347826087, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22726; Mature: 22594

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQQSRPIVIVIAEKNPLLQSSLIKLFSGDDRFTVAAVTSDGERFIEAVEKTPFDVGII
CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEE
GWEMPYLDGRGVLQTLRTRVDAPRLIVYTGSPNPDVPRQAMTLGAAGFCSKREPPEQLLD
EEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH
TIIAVAAGRMVFPFIDVSSLASDPLAGLTPRERELLAALAGGLTNQQMAGQLDISLNTVK
HHHHHHCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCEEEEEEHHHH
FHLKNLYDKLGVGNRAQAVAFYLKGRESR
HHHHHHHHHHCCCCHHHEEEEEEECCCCC
>Mature Secondary Structure 
AVQQSRPIVIVIAEKNPLLQSSLIKLFSGDDRFTVAAVTSDGERFIEAVEKTPFDVGII
CCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCEEEEE
GWEMPYLDGRGVLQTLRTRVDAPRLIVYTGSPNPDVPRQAMTLGAAGFCSKREPPEQLLD
EEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCHHHHHH
TIIAVAAGRMVFPFIDVSSLASDPLAGLTPRERELLAALAGGLTNQQMAGQLDISLNTVK
HHHHHHCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHCCEEEEEEHHHH
FHLKNLYDKLGVGNRAQAVAFYLKGRESR
HHHHHHHHHHCCCCHHHEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898880; 9677290 [H]