| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310353
Identifier: 83310353
GI number: 83310353
Start: 1337426
End: 1337932
Strand: Reverse
Name: 83310353
Synonym: amb1254
Alternate gene names: NA
Gene position: 1337932-1337426 (Counterclockwise)
Preceding gene: 83310354
Following gene: 83310352
Centisome position: 26.94
GC content: 64.89
Gene sequence:
>507_bases ATGACCACCAAGGTAGCCCTGTTCCTGGCCCATGCTTTGGCCATGGAAAACGAGGCGGCGGATCGTTACGACGAATTGGC CGACTCCATGGAAGTCCACCACAACCTCGAAGTCGCCGAACTGTTCCGCCAGATGGCCAAGTTCTCGCGCCTGCATGGGG CGTCGGTGGCGGCGCGGGCCGCCGGCCACGACCTGCCCAAACTGAAATCCTGGCAATACCGCTGGAACACGCCCGAGCCG CCCGAAGTGGGCACTCCCGGCGGCACCCATTACATGATGACCGCCTGGCACGCCCTGGACTTCGCCCTGGACAACGAGAA GCGGGGTCATCGCTTCTATGCCGACGAAGCCGCCGGCAGCGACGATGCCGAGGTTCGGGCCCTGGCCGCCGAAATGGCCG AGGAAGAGCGGGAACACGTAGTGGAACTGGAAAAATGGATCGCCCGCACCCCGAAGCCGGACATCGACTGGGCCGACGAC CCGGACGAGGCCCTGGTCGCGGATTGA
Upstream 100 bases:
>100_bases AAGGGGCATAGCCGAGGGTTCGAACCTCGGGCATACTGCCGGTATCGGTTGAGGCGCCGCCGCCACCCGTCGCCTCGGTT CATGCAGGAGGACACTGCCC
Downstream 100 bases:
>100_bases CGCCGTTTTCCTCTGCGCTCCGGTGTGAACCGTGAGCGCGGAGCACCGCCGGGGCGTGCTGTTCGCCCTGGCGTGCTACG GCACCTGGGGACTGTTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Ferredoxin; Rubrerythrin Subfamily Protein; Ferritin-Like Protein
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTTKVALFLAHALAMENEAADRYDELADSMEVHHNLEVAELFRQMAKFSRLHGASVAARAAGHDLPKLKSWQYRWNTPEP PEVGTPGGTHYMMTAWHALDFALDNEKRGHRFYADEAAGSDDAEVRALAAEMAEEEREHVVELEKWIARTPKPDIDWADD PDEALVAD
Sequences:
>Translated_168_residues MTTKVALFLAHALAMENEAADRYDELADSMEVHHNLEVAELFRQMAKFSRLHGASVAARAAGHDLPKLKSWQYRWNTPEP PEVGTPGGTHYMMTAWHALDFALDNEKRGHRFYADEAAGSDDAEVRALAAEMAEEEREHVVELEKWIARTPKPDIDWADD PDEALVAD >Mature_167_residues TTKVALFLAHALAMENEAADRYDELADSMEVHHNLEVAELFRQMAKFSRLHGASVAARAAGHDLPKLKSWQYRWNTPEPP EVGTPGGTHYMMTAWHALDFALDNEKRGHRFYADEAAGSDDAEVRALAAEMAEEEREHVVELEKWIARTPKPDIDWADDP DEALVAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18925; Mature: 18794
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKVALFLAHALAMENEAADRYDELADSMEVHHNLEVAELFRQMAKFSRLHGASVAARA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH AGHDLPKLKSWQYRWNTPEPPEVGTPGGTHYMMTAWHALDFALDNEKRGHRFYADEAAGS HCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC DDAEVRALAAEMAEEEREHVVELEKWIARTPKPDIDWADDPDEALVAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTKVALFLAHALAMENEAADRYDELADSMEVHHNLEVAELFRQMAKFSRLHGASVAARA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH AGHDLPKLKSWQYRWNTPEPPEVGTPGGTHYMMTAWHALDFALDNEKRGHRFYADEAAGS HCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC DDAEVRALAAEMAEEEREHVVELEKWIARTPKPDIDWADDPDEALVAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA