| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yfiQ [H]
Identifier: 83310337
GI number: 83310337
Start: 1315982
End: 1318717
Strand: Reverse
Name: yfiQ [H]
Synonym: amb1238
Alternate gene names: 83310337
Gene position: 1318717-1315982 (Counterclockwise)
Preceding gene: 83310345
Following gene: 83310330
Centisome position: 26.55
GC content: 70.54
Gene sequence:
>2736_bases ATGCGGAGCCCAGCGGGAAGCGAGGAGAAAAACCCCACTTCTCCCTTGCATTTTCCGCAGTGCGGCAGAAACTCGACTCC CATGAGCATTCACAACCTTTCCTTCCTGTTCGAGCCCACTTCGGTGGCGGTGATCGGAGCCTCGGACCGGCCGCGCTCGG CGGGCGCCGTGGTCATGCGCAACCTGCTGACCGCCGGGTTCAAGGGCCCCATCATGCCGGTGCACCCCAAGCACCGCGCC ATCGCCGGCGTCCTGGCCTATCCCGACGTGCGGTCCATGCCGTTGACGCCGGATCTGGCGGTGCTGTGCACGCCGGGCGA GACCATTCCCGGCCTGATCGAGGATCTGGGGCGGCGAGGCACCCGGGCGGCGGTGGTCATCGCCGGCGATGTGGACAAGG AGGCCATGCTGGCGGCGGCGCGGCCCTGGTCCTTGCGCATCCTGGGCGGCGGCGCGCTGGGCCTGCTGGTGCCGCGCATC CGCCTGGACGCCAGCTTCTCCCATGTGCCGGCCCTTCCCGGCAAGGTGGCCTTCGTGTCGCAATCGGGGGCGCTGTCCAC CGCCGTGCTGGACTGGGCCCGGCCACGCGGCATCGGGTTCTCCCACTTCATCAGCCTGGGCGACGCCCACGACATCGATT TCGCCGATGTGATGGACTATCTGGCCAATGACGACCAGACCCGGGCCATCCTGCTGTACATCGAATCCATCGGGGCGCGG CGCAACTTCATCCCCGCCGCCCGGGCCGCCGCCCGCAACAAGCCGGTGCTGTTGGTGCGCGCCGTGCCCGAGGCCGACGA CCATCCGGTGGGCAAGTTCCTGGCCGAATCCCTGGCCCGGCCCGAGGATGCCTTCGACGCCGCCATCCGCCGGGCCGGTG CGCTGCGCGTGCACGACATCGACGAGCTGTTCGGCGCGGTGGAGACCCTGGCGCGGGCCAAGCCCATGAAGGGCCAGCGC CTGGCCGTGCTGTCCAACGGCGGCGGCACCGCCATGATGGCCCTGGCCGAGATGGGCGGCCCCGGCGGCGGCCAGATGGC CACGCTGTCCGAGGAAACCCTGCGCAAGCTGGCCGCCCTGATGCCGCGCGGCTGGAAGGCGGGCAATCCGGTGGACCTGG GCGTCGACGCCGCCGGCAAGCGCTATGCCGACATGGCCCGCGTGCTGATCGAGGCCGAGGAGGTGGACGCCACCCTGGTG GTTCACGCCCCCAACGCCATGGCCGACGGGCTGGAGGCCGCCCAGGCGGTGATCGACGTGCAGAAGCGCCATGGCGGCGC GGTGCTCACCTCCTGGGTGGGCGAGGAGGCCGCCGCCCCCGCCCGCAAGCTGTTCGCCGAAGCCGCCCTGCCCACCTACG ACACCCCCGGCCGCGCCGTGCGGGCCTTTCGCCATCTGGTCAATTACCAGCGCAACCAGGACATGCTGATGGAGACGCCG CCCTCGCAACTGGGCGGCTTCGCGGCGGCCAAGGGCACGGCGCGCCTCATCGTCGGGCGCGGCCTTGCCGAGGCGGGCGG CAACCTCACCGAGCCCGACGCCAAGGCCCTGCTGTCGGCCTATGGCATCAAGACCCAGGACACCCGCCTCGCCCCCGACG TGGACGGCGCCGTGGCCGCCGCCGAGGCGGTGGGCTATCCCGTGGCGTTGACCATCGCCTCGCCCGACGTGGCCCGCAAA TGGGATGTGGGCGGCGTGGCGCTGAACCTGGAAGACGGGGCGGCGGTGCGCTCGGCGGCCGAGGGCATCCTGCGCCGCGT CACCGAGACCCGTCCCGACATCAAGGTGGACGGCTTCACCATCCAGCGCATGGCCTTCCGCCCCAATGCCCGGCAATTGA TCGTCGGCGTGGCCTGCGACGCCCTGTTCGGCCCCGTGCTGGTGTTCGGCGAGGGCGGCCGGGCGGTGGAAGTGATCCGC GACCACACGGTGGGGCTTCCCCCCGTCAACCTGCCCCTGGCCCGCGGCATGATCGGCCGCACCCGGGTGTCGCGCCTGCT GCAGGCCCATGGACGGCGCCCCGCCGTGGACGTGGACGCGGTGGCCGAGGTGCTGGTGCGGGTGTCGCGCATGCTGGCCG ACAATCCCGAGATCGTCGCCTGCGACATCAACCCGCTATTCGCCGACGAGCATGGTGCCCTGGCGGTGGACGCCCGCATC CGGGTGGCGCCGTGGGAAGACACCGACCTGCGCCACTTCTCCATCCTGCCCTATCCTGCCGAGCTGGAAGAAAGCGCCAG GCTGCACGACGGCTCGCCCGTCACCCTGCGCCCCATCCGGCCCGAGGACACCGTCGCCCATTCCGAGATGATGGGCCGCA TGACGCCTCAGGACCTGCGGCTGCGATTCTTCGGACAGGTGCGGCAGATCCATCATCACCAGATGGCGCGCCTCACCCAG ATCGATTACGAGCGCGAGATGGCCTTCATCGCCACCCGCGCCAACAAGGACGGCACCCCCGAGACCCTGGGCGTGGTCCG CACCGTCACCGACCCCGACAACCGGCGGGCGGAACTGGCGGTGCTGGTGCGCTCGGACATGAAGGGCACCGGCCTGGGCA GCATGCTGATGGACAAGATCGTCCGCTATCAGCGAGCGCGCAAGACCCGGGCCATCTACGCCCAGATCATGATAGAGAAC GACGCCATGATCCGCCTCGCCGCCAAGGCCGGCTTCAAGAAGCACCCGTCGGACGAGGACCCCGACGTGGTCGAGATGGT GCTGGAGCTGGTCTAA
Upstream 100 bases:
>100_bases CGCAGCCAAGAGAAACAACCACGGCGGCAACAGCCATTCTCAGCATCTGGATACAACCCCGAAAATACGGCGAACCCCTT TAAGCGGCGCACCATAGACC
Downstream 100 bases:
>100_bases CCCCCAATTCGGGGGCGTTCGCCCCCGATCCCCCAACCGGGAAGCACAGCTTCCCGGCCCCTTCAGCTTTTGGAAACTGG AGGGTCGGAGGCTGTGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 911; Mature: 911
Protein sequence:
>911_residues MRSPAGSEEKNPTSPLHFPQCGRNSTPMSIHNLSFLFEPTSVAVIGASDRPRSAGAVVMRNLLTAGFKGPIMPVHPKHRA IAGVLAYPDVRSMPLTPDLAVLCTPGETIPGLIEDLGRRGTRAAVVIAGDVDKEAMLAAARPWSLRILGGGALGLLVPRI RLDASFSHVPALPGKVAFVSQSGALSTAVLDWARPRGIGFSHFISLGDAHDIDFADVMDYLANDDQTRAILLYIESIGAR RNFIPAARAAARNKPVLLVRAVPEADDHPVGKFLAESLARPEDAFDAAIRRAGALRVHDIDELFGAVETLARAKPMKGQR LAVLSNGGGTAMMALAEMGGPGGGQMATLSEETLRKLAALMPRGWKAGNPVDLGVDAAGKRYADMARVLIEAEEVDATLV VHAPNAMADGLEAAQAVIDVQKRHGGAVLTSWVGEEAAAPARKLFAEAALPTYDTPGRAVRAFRHLVNYQRNQDMLMETP PSQLGGFAAAKGTARLIVGRGLAEAGGNLTEPDAKALLSAYGIKTQDTRLAPDVDGAVAAAEAVGYPVALTIASPDVARK WDVGGVALNLEDGAAVRSAAEGILRRVTETRPDIKVDGFTIQRMAFRPNARQLIVGVACDALFGPVLVFGEGGRAVEVIR DHTVGLPPVNLPLARGMIGRTRVSRLLQAHGRRPAVDVDAVAEVLVRVSRMLADNPEIVACDINPLFADEHGALAVDARI RVAPWEDTDLRHFSILPYPAELEESARLHDGSPVTLRPIRPEDTVAHSEMMGRMTPQDLRLRFFGQVRQIHHHQMARLTQ IDYEREMAFIATRANKDGTPETLGVVRTVTDPDNRRAELAVLVRSDMKGTGLGSMLMDKIVRYQRARKTRAIYAQIMIEN DAMIRLAAKAGFKKHPSDEDPDVVEMVLELV
Sequences:
>Translated_911_residues MRSPAGSEEKNPTSPLHFPQCGRNSTPMSIHNLSFLFEPTSVAVIGASDRPRSAGAVVMRNLLTAGFKGPIMPVHPKHRA IAGVLAYPDVRSMPLTPDLAVLCTPGETIPGLIEDLGRRGTRAAVVIAGDVDKEAMLAAARPWSLRILGGGALGLLVPRI RLDASFSHVPALPGKVAFVSQSGALSTAVLDWARPRGIGFSHFISLGDAHDIDFADVMDYLANDDQTRAILLYIESIGAR RNFIPAARAAARNKPVLLVRAVPEADDHPVGKFLAESLARPEDAFDAAIRRAGALRVHDIDELFGAVETLARAKPMKGQR LAVLSNGGGTAMMALAEMGGPGGGQMATLSEETLRKLAALMPRGWKAGNPVDLGVDAAGKRYADMARVLIEAEEVDATLV VHAPNAMADGLEAAQAVIDVQKRHGGAVLTSWVGEEAAAPARKLFAEAALPTYDTPGRAVRAFRHLVNYQRNQDMLMETP PSQLGGFAAAKGTARLIVGRGLAEAGGNLTEPDAKALLSAYGIKTQDTRLAPDVDGAVAAAEAVGYPVALTIASPDVARK WDVGGVALNLEDGAAVRSAAEGILRRVTETRPDIKVDGFTIQRMAFRPNARQLIVGVACDALFGPVLVFGEGGRAVEVIR DHTVGLPPVNLPLARGMIGRTRVSRLLQAHGRRPAVDVDAVAEVLVRVSRMLADNPEIVACDINPLFADEHGALAVDARI RVAPWEDTDLRHFSILPYPAELEESARLHDGSPVTLRPIRPEDTVAHSEMMGRMTPQDLRLRFFGQVRQIHHHQMARLTQ IDYEREMAFIATRANKDGTPETLGVVRTVTDPDNRRAELAVLVRSDMKGTGLGSMLMDKIVRYQRARKTRAIYAQIMIEN DAMIRLAAKAGFKKHPSDEDPDVVEMVLELV >Mature_911_residues MRSPAGSEEKNPTSPLHFPQCGRNSTPMSIHNLSFLFEPTSVAVIGASDRPRSAGAVVMRNLLTAGFKGPIMPVHPKHRA IAGVLAYPDVRSMPLTPDLAVLCTPGETIPGLIEDLGRRGTRAAVVIAGDVDKEAMLAAARPWSLRILGGGALGLLVPRI RLDASFSHVPALPGKVAFVSQSGALSTAVLDWARPRGIGFSHFISLGDAHDIDFADVMDYLANDDQTRAILLYIESIGAR RNFIPAARAAARNKPVLLVRAVPEADDHPVGKFLAESLARPEDAFDAAIRRAGALRVHDIDELFGAVETLARAKPMKGQR LAVLSNGGGTAMMALAEMGGPGGGQMATLSEETLRKLAALMPRGWKAGNPVDLGVDAAGKRYADMARVLIEAEEVDATLV VHAPNAMADGLEAAQAVIDVQKRHGGAVLTSWVGEEAAAPARKLFAEAALPTYDTPGRAVRAFRHLVNYQRNQDMLMETP PSQLGGFAAAKGTARLIVGRGLAEAGGNLTEPDAKALLSAYGIKTQDTRLAPDVDGAVAAAEAVGYPVALTIASPDVARK WDVGGVALNLEDGAAVRSAAEGILRRVTETRPDIKVDGFTIQRMAFRPNARQLIVGVACDALFGPVLVFGEGGRAVEVIR DHTVGLPPVNLPLARGMIGRTRVSRLLQAHGRRPAVDVDAVAEVLVRVSRMLADNPEIVACDINPLFADEHGALAVDARI RVAPWEDTDLRHFSILPYPAELEESARLHDGSPVTLRPIRPEDTVAHSEMMGRMTPQDLRLRFFGQVRQIHHHQMARLTQ IDYEREMAFIATRANKDGTPETLGVVRTVTDPDNRRAELAVLVRSDMKGTGLGSMLMDKIVRYQRARKTRAIYAQIMIEN DAMIRLAAKAGFKKHPSDEDPDVVEMVLELV
Specific function: Unknown
COG id: COG1042
COG function: function code C; Acyl-CoA synthetase (NDP forming)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788938, Length=873, Percent_Identity=42.6116838487972, Blast_Score=677, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR011761 - InterPro: IPR003781 - InterPro: IPR016040 - InterPro: IPR016102 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 97822; Mature: 97822
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPAGSEEKNPTSPLHFPQCGRNSTPMSIHNLSFLFEPTSVAVIGASDRPRSAGAVVMR CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEECCCEEEEEECCCCCCCHHHHHHH NLLTAGFKGPIMPVHPKHRAIAGVLAYPDVRSMPLTPDLAVLCTPGETIPGLIEDLGRRG HHHHCCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCC TRAAVVIAGDVDKEAMLAAARPWSLRILGGGALGLLVPRIRLDASFSHVPALPGKVAFVS CEEEEEEECCCCHHHHHHCCCCEEEEEECCCHHHHHCCCEEECCCCCCCCCCCCCEEEEE QSGALSTAVLDWARPRGIGFSHFISLGDAHDIDFADVMDYLANDDQTRAILLYIESIGAR CCCCHHHHHHHCCCCCCCCHHHHEECCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCC RNFIPAARAAARNKPVLLVRAVPEADDHPVGKFLAESLARPEDAFDAAIRRAGALRVHDI CCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEECH DELFGAVETLARAKPMKGQRLAVLSNGGGTAMMALAEMGGPGGGQMATLSEETLRKLAAL HHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEHHHHHHCCCCCCCEEECCHHHHHHHHHH MPRGWKAGNPVDLGVDAAGKRYADMARVLIEAEEVDATLVVHAPNAMADGLEAAQAVIDV CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHH QKRHGGAVLTSWVGEEAAAPARKLFAEAALPTYDTPGRAVRAFRHLVNYQRNQDMLMETP HHHCCCEEEEHHHCCHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECC PSQLGGFAAAKGTARLIVGRGLAEAGGNLTEPDAKALLSAYGIKTQDTRLAPDVDGAVAA HHHHCCCCCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH AEAVGYPVALTIASPDVARKWDVGGVALNLEDGAAVRSAAEGILRRVTETRPDIKVDGFT HHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECCEE IQRMAFRPNARQLIVGVACDALFGPVLVFGEGGRAVEVIRDHTVGLPPVNLPLARGMIGR EEEEEECCCHHEEEEEHHHHHHHCCEEEECCCCCEEEEEHHCCCCCCCCCCHHHHCHHHH TRVSRLLQAHGRRPAVDVDAVAEVLVRVSRMLADNPEIVACDINPLFADEHGALAVDARI HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCCEEEEEEE RVAPWEDTDLRHFSILPYPAELEESARLHDGSPVTLRPIRPEDTVAHSEMMGRMTPQDLR EEECCCCCCCCEEEECCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHH LRFFGQVRQIHHHQMARLTQIDYEREMAFIATRANKDGTPETLGVVRTVTDPDNRRAELA HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEE VLVRSDMKGTGLGSMLMDKIVRYQRARKTRAIYAQIMIENDAMIRLAAKAGFKKHPSDED EEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCCCCCC PDVVEMVLELV CHHHHHHHHHC >Mature Secondary Structure MRSPAGSEEKNPTSPLHFPQCGRNSTPMSIHNLSFLFEPTSVAVIGASDRPRSAGAVVMR CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEECCCEEEEEECCCCCCCHHHHHHH NLLTAGFKGPIMPVHPKHRAIAGVLAYPDVRSMPLTPDLAVLCTPGETIPGLIEDLGRRG HHHHCCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCC TRAAVVIAGDVDKEAMLAAARPWSLRILGGGALGLLVPRIRLDASFSHVPALPGKVAFVS CEEEEEEECCCCHHHHHHCCCCEEEEEECCCHHHHHCCCEEECCCCCCCCCCCCCEEEEE QSGALSTAVLDWARPRGIGFSHFISLGDAHDIDFADVMDYLANDDQTRAILLYIESIGAR CCCCHHHHHHHCCCCCCCCHHHHEECCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCC RNFIPAARAAARNKPVLLVRAVPEADDHPVGKFLAESLARPEDAFDAAIRRAGALRVHDI CCCCHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEECH DELFGAVETLARAKPMKGQRLAVLSNGGGTAMMALAEMGGPGGGQMATLSEETLRKLAAL HHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEHHHHHHCCCCCCCEEECCHHHHHHHHHH MPRGWKAGNPVDLGVDAAGKRYADMARVLIEAEEVDATLVVHAPNAMADGLEAAQAVIDV CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHH QKRHGGAVLTSWVGEEAAAPARKLFAEAALPTYDTPGRAVRAFRHLVNYQRNQDMLMETP HHHCCCEEEEHHHCCHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECC PSQLGGFAAAKGTARLIVGRGLAEAGGNLTEPDAKALLSAYGIKTQDTRLAPDVDGAVAA HHHHCCCCCCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH AEAVGYPVALTIASPDVARKWDVGGVALNLEDGAAVRSAAEGILRRVTETRPDIKVDGFT HHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCEEECCEE IQRMAFRPNARQLIVGVACDALFGPVLVFGEGGRAVEVIRDHTVGLPPVNLPLARGMIGR EEEEEECCCHHEEEEEHHHHHHHCCEEEECCCCCEEEEEHHCCCCCCCCCCHHHHCHHHH TRVSRLLQAHGRRPAVDVDAVAEVLVRVSRMLADNPEIVACDINPLFADEHGALAVDARI HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCCEEEEEEE RVAPWEDTDLRHFSILPYPAELEESARLHDGSPVTLRPIRPEDTVAHSEMMGRMTPQDLR EEECCCCCCCCEEEECCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHH LRFFGQVRQIHHHQMARLTQIDYEREMAFIATRANKDGTPETLGVVRTVTDPDNRRAELA HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEE VLVRSDMKGTGLGSMLMDKIVRYQRARKTRAIYAQIMIENDAMIRLAAKAGFKKHPSDED EEEECCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCCCCCCCCCC PDVVEMVLELV CHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]