| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310330
Identifier: 83310330
GI number: 83310330
Start: 1306914
End: 1307792
Strand: Reverse
Name: 83310330
Synonym: amb1231
Alternate gene names: NA
Gene position: 1307792-1306914 (Counterclockwise)
Preceding gene: 83310337
Following gene: 83310329
Centisome position: 26.33
GC content: 68.49
Gene sequence:
>879_bases TTGACCACCTTGCTCCGGCAAGAGCGAGAGTCGGTTCACTGTCGGGTTGGGGCGCGCTATGCTCTTGTCATGTCAGCCCG ACGTCCGCCGCCACAGGATCAGCCCGAGGCCGAGCCCCAATGCTGCCAGGGGGTGGGAGCCACCATGGTCGGGCATTTCG CGACGAGACTGGAGGTGGAGGCGGCCAAGGCCGGCGGCAGCCTGACCGCCAGCCAGATCCGCGCCCTGGCCCGGCGCTTC GTCGAGTCCGAGCAGACCCGCTTCAAGGCCTATTACCAGCGGGCCTGGAACGACTGCACCCAAAGCCGCGCCGCGCAGCA ATGGGAGGGAGCCCGCGAACAGCCGTTCGAGCGCATCCTGATGCGCCGCTTCGCCCACCTCTTTCCGCCCCGCAGCGGCG ACGAGGGTGGCGAAGGCATCCTGTCGCGCCGGATGATCCCCGGCTTCCACATGGCCATGGACAAGATGATCGGCCCCACC CAGTTCGAGCAGTGCCGCCGTCGCTCCACCGCCATCCTGGACCGCCACCCGGGCGGCGGCGGCGGGCACGACTGGCGCGC CATCCATGCCGATCCCGAGGCGGCCCGGCTGATCGACGATGTTCTGATGGTGGTGGTTCACGCCTTCGCGGATTTCAAGA AGCGCCGGGTGTGGTTCATGACCCTGGTCAATTCCCACCTCACGCCCGCCCAGGTCGGCGCCCGGGACGAGCACTGGCAG CTGAACGAGAGCGCCTTCGCCGCCCTGATGCGCGCCCTTTTCGCCGATCTGGGAGCGCTGGCCCACGCCGACCCCGCCCA GGTCAGGGCACGGTGGAGCGATGCGGACCATGAGGCGCTTTGCCGCTTCATCCTGCATCTTGAACGCCCCATGACCTGA
Upstream 100 bases:
>100_bases GCGGGACGGTAATACTCGTCCTCGAACACGTTGACCACGCGGGTCATGGATTTCAGCCGGTCGAACATGGCGGGGACATC TCCATTGCGAGGCCTCCCAT
Downstream 100 bases:
>100_bases CATCGGACCCGCCGATTAAGACTCCTTAAATAACATCTTTTCTTCTGATGATTGTTTATGCATTCTCCTGCGCGCATCGT GGGAGGGCGTGCAACCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTTLLRQERESVHCRVGARYALVMSARRPPPQDQPEAEPQCCQGVGATMVGHFATRLEVEAAKAGGSLTASQIRALARRF VESEQTRFKAYYQRAWNDCTQSRAAQQWEGAREQPFERILMRRFAHLFPPRSGDEGGEGILSRRMIPGFHMAMDKMIGPT QFEQCRRRSTAILDRHPGGGGGHDWRAIHADPEAARLIDDVLMVVVHAFADFKKRRVWFMTLVNSHLTPAQVGARDEHWQ LNESAFAALMRALFADLGALAHADPAQVRARWSDADHEALCRFILHLERPMT
Sequences:
>Translated_292_residues MTTLLRQERESVHCRVGARYALVMSARRPPPQDQPEAEPQCCQGVGATMVGHFATRLEVEAAKAGGSLTASQIRALARRF VESEQTRFKAYYQRAWNDCTQSRAAQQWEGAREQPFERILMRRFAHLFPPRSGDEGGEGILSRRMIPGFHMAMDKMIGPT QFEQCRRRSTAILDRHPGGGGGHDWRAIHADPEAARLIDDVLMVVVHAFADFKKRRVWFMTLVNSHLTPAQVGARDEHWQ LNESAFAALMRALFADLGALAHADPAQVRARWSDADHEALCRFILHLERPMT >Mature_291_residues TTLLRQERESVHCRVGARYALVMSARRPPPQDQPEAEPQCCQGVGATMVGHFATRLEVEAAKAGGSLTASQIRALARRFV ESEQTRFKAYYQRAWNDCTQSRAAQQWEGAREQPFERILMRRFAHLFPPRSGDEGGEGILSRRMIPGFHMAMDKMIGPTQ FEQCRRRSTAILDRHPGGGGGHDWRAIHADPEAARLIDDVLMVVVHAFADFKKRRVWFMTLVNSHLTPAQVGARDEHWQL NESAFAALMRALFADLGALAHADPAQVRARWSDADHEALCRFILHLERPMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33007; Mature: 32876
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLLRQERESVHCRVGARYALVMSARRPPPQDQPEAEPQCCQGVGATMVGHFATRLEVE CCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH AAKAGGSLTASQIRALARRFVESEQTRFKAYYQRAWNDCTQSRAAQQWEGAREQPFERIL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH MRRFAHLFPPRSGDEGGEGILSRRMIPGFHMAMDKMIGPTQFEQCRRRSTAILDRHPGGG HHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC GGHDWRAIHADPEAARLIDDVLMVVVHAFADFKKRRVWFMTLVNSHLTPAQVGARDEHWQ CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC LNESAFAALMRALFADLGALAHADPAQVRARWSDADHEALCRFILHLERPMT CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TTLLRQERESVHCRVGARYALVMSARRPPPQDQPEAEPQCCQGVGATMVGHFATRLEVE CHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHH AAKAGGSLTASQIRALARRFVESEQTRFKAYYQRAWNDCTQSRAAQQWEGAREQPFERIL HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH MRRFAHLFPPRSGDEGGEGILSRRMIPGFHMAMDKMIGPTQFEQCRRRSTAILDRHPGGG HHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC GGHDWRAIHADPEAARLIDDVLMVVVHAFADFKKRRVWFMTLVNSHLTPAQVGARDEHWQ CCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC LNESAFAALMRALFADLGALAHADPAQVRARWSDADHEALCRFILHLERPMT CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA