| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310315
Identifier: 83310315
GI number: 83310315
Start: 1290532
End: 1291428
Strand: Reverse
Name: 83310315
Synonym: amb1216
Alternate gene names: NA
Gene position: 1291428-1290532 (Counterclockwise)
Preceding gene: 83310316
Following gene: 83310313
Centisome position: 26.0
GC content: 68.67
Gene sequence:
>897_bases ATGATCGGAAGGCTGCTGATCGCCGTCCTCCTCGGCTGGGGTGCCTCCGCCCTGGCTGTGGAGGTTCCTCCGCCGGAGGA GTTGCGTGCCGCCGCCATCCAGGCTCCCGACCTAAGCTTTCCCGCCGCCCCCTCACCCCTGACCGAGACGGCGGTTCCGG GCATGGCGCTGTTCAAGCCCGATGGCCCCGGCCCGTTTCCCGCTCTCGTCCTGTTTCACCAGTGCGGCGGGCTGGGGCAG CGCGGCCGCACCAATCTCTCCATGCTGGACTGGGCGCGGCGCGCAGTTGAAAAAGGCTATGTGGTCCTGCTGATAGATGC CCTGAACCAGCGCGGAGTCGATTCCGTCTGCTTTGGCCCCAGGAACGGACTGGTTTTCGCCCGGGGCGTCCGCGATGCCT TCCAGGCCGCCCGCCATCTGCGCGCTCTGCCTTATGTGGATGCCAGGCGGGTCGGGCTGGCTGGCTGGTCATGGGGCGCC ATGGTCGGCCTGCTGGCCTCGCGCGCCTCGTGGGCGGAAGCGCTGGCCGAGGGCGAGGGCTTCCGCGCCGTGGTTTCCAT GTATCCCGGCTGCTTCACCATCCGGCCGCGCTTCACCTCGGCCTTCGACATCGCCGGCCCGGACGTGACGGTTCCGCTGC TGGTGCTGATGGGCGGTCAAGACACCGAGACCCCGGCCGACGACTGCCTGCCGCCTCTCGAAGCCGCAAGGGCTGCGGGG GCGCCGGTGGACTGGCACCTGTTTCCCGACGCCACCCATTGCTGGGATTGCCGCCAGTTGGACGGCCATTCCAGGACCAC GGTCCGGGGCAGCCAGGTCACCTATCACCACGACAGATCCGTCACCGAGGAATCCGCCCAACGGATGTTCGGCTTCCTCG GCGAGGCGATGCGGTAA
Upstream 100 bases:
>100_bases GGCATCGCCAAGCGGCTGACCTCGGAGGCCCAGGCCCTCGACCGCGAGGTTCACCAGTTCATGGTCTCCATGCGCAGCGA CCAGGGGGCGGAAAGCTAGA
Downstream 100 bases:
>100_bases CCTAGATCAGGAACAGGTTGTCCAGCGCCTTGAACAGGTCGTCGGCGAAGGTGGCGCCCTTGAACAGCACGGGAATCCTC TTGGGCAACAGCTTGAGGAT
Product: putative carboxymethylenebutenolidase
Products: NA
Alternate protein names: Hydrolase Protein; Dienelactone Hydrolase Family; Dienelactone Hydrolase Family Protein; Carboxymethylenebutenolidase; Lipase; Prolyl Oligopeptidase Family Protein
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MIGRLLIAVLLGWGASALAVEVPPPEELRAAAIQAPDLSFPAAPSPLTETAVPGMALFKPDGPGPFPALVLFHQCGGLGQ RGRTNLSMLDWARRAVEKGYVVLLIDALNQRGVDSVCFGPRNGLVFARGVRDAFQAARHLRALPYVDARRVGLAGWSWGA MVGLLASRASWAEALAEGEGFRAVVSMYPGCFTIRPRFTSAFDIAGPDVTVPLLVLMGGQDTETPADDCLPPLEAARAAG APVDWHLFPDATHCWDCRQLDGHSRTTVRGSQVTYHHDRSVTEESAQRMFGFLGEAMR
Sequences:
>Translated_298_residues MIGRLLIAVLLGWGASALAVEVPPPEELRAAAIQAPDLSFPAAPSPLTETAVPGMALFKPDGPGPFPALVLFHQCGGLGQ RGRTNLSMLDWARRAVEKGYVVLLIDALNQRGVDSVCFGPRNGLVFARGVRDAFQAARHLRALPYVDARRVGLAGWSWGA MVGLLASRASWAEALAEGEGFRAVVSMYPGCFTIRPRFTSAFDIAGPDVTVPLLVLMGGQDTETPADDCLPPLEAARAAG APVDWHLFPDATHCWDCRQLDGHSRTTVRGSQVTYHHDRSVTEESAQRMFGFLGEAMR >Mature_298_residues MIGRLLIAVLLGWGASALAVEVPPPEELRAAAIQAPDLSFPAAPSPLTETAVPGMALFKPDGPGPFPALVLFHQCGGLGQ RGRTNLSMLDWARRAVEKGYVVLLIDALNQRGVDSVCFGPRNGLVFARGVRDAFQAARHLRALPYVDARRVGLAGWSWGA MVGLLASRASWAEALAEGEGFRAVVSMYPGCFTIRPRFTSAFDIAGPDVTVPLLVLMGGQDTETPADDCLPPLEAARAAG APVDWHLFPDATHCWDCRQLDGHSRTTVRGSQVTYHHDRSVTEESAQRMFGFLGEAMR
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32027; Mature: 32027
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGRLLIAVLLGWGASALAVEVPPPEELRAAAIQAPDLSFPAAPSPLTETAVPGMALFKP CHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEECC DGPGPFPALVLFHQCGGLGQRGRTNLSMLDWARRAVEKGYVVLLIDALNQRGVDSVCFGP CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEECC RNGLVFARGVRDAFQAARHLRALPYVDARRVGLAGWSWGAMVGLLASRASWAEALAEGEG CCCEEEECCHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC FRAVVSMYPGCFTIRPRFTSAFDIAGPDVTVPLLVLMGGQDTETPADDCLPPLEAARAAG CEEHHHHCCCEEEECCCCCCEEECCCCCCCEEEEEEECCCCCCCCHHHCCCCHHHHHHCC APVDWHLFPDATHCWDCRQLDGHSRTTVRGSQVTYHHDRSVTEESAQRMFGFLGEAMR CCEEEEECCCCCCCCCHHHCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIGRLLIAVLLGWGASALAVEVPPPEELRAAAIQAPDLSFPAAPSPLTETAVPGMALFKP CHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCEEEECC DGPGPFPALVLFHQCGGLGQRGRTNLSMLDWARRAVEKGYVVLLIDALNQRGVDSVCFGP CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEECC RNGLVFARGVRDAFQAARHLRALPYVDARRVGLAGWSWGAMVGLLASRASWAEALAEGEG CCCEEEECCHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC FRAVVSMYPGCFTIRPRFTSAFDIAGPDVTVPLLVLMGGQDTETPADDCLPPLEAARAAG CEEHHHHCCCEEEECCCCCCEEECCCCCCCEEEEEEECCCCCCCCHHHCCCCHHHHHHCC APVDWHLFPDATHCWDCRQLDGHSRTTVRGSQVTYHHDRSVTEESAQRMFGFLGEAMR CCEEEEECCCCCCCCCHHHCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA