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The map label for this gene is mcp4 [H]

Identifier: 83310316

GI number: 83310316

Start: 1291430

End: 1293127

Strand: Reverse

Name: mcp4 [H]

Synonym: amb1217

Alternate gene names: 83310316

Gene position: 1293127-1291430 (Counterclockwise)

Preceding gene: 83310317

Following gene: 83310315

Centisome position: 26.03

GC content: 67.26

Gene sequence:

>1698_bases
ATGTTGGGAAAATCAGGGATTCTGTTGAAGCTGATGACCACCGCCGTCCTGGCGCTGGTGGGATTCGCCATTCTGTCCGC
GGTGGCGCTGACCCAGTTGCGGCAATCCATGCTGAACGACCGCATCGAGAAGGTCGCCGCCCTGGCCGAAGTGGCGCGGG
GCACCCTCAAATCCTTCCATGACCGCGCCAAGGCGGGTGAGTTCGACGAGGCCACCGCCAAGGCCCAGGCCATCGAGACC
CTTCGCCCCCTGCGCTACCAGGGCGATGAATACTTCTTCATCTACGATTTCGACGGCGTCAATGTGCTGCATCCCGTCCG
GCCCGAGCGGGAGGGCAAGAATTTCATCGACAGCAAGGACGCCGACGGCAAGGCCTATATCCGCGGCATGATCGAGGGGT
CGAAGACCGGCCGGGCGGTGGAATTCTACAAATTCCCCCGCCCCGGATCCGACGCCCCCGTCCCCAAGGTTTCGGTCGCC
TTGTCCCATGCGCCGTGGAAACTGATGGTCGGGACCGGCATCTATATCGACGACATCGACACCGCCTTCAACGCCGCCGC
CCTTCGCTTCGCCGGCATCGCCCTGGTGGTCTGCCTGGTGGCCCTGGGTCTGGTCACCGTCTTGTCCCGTGACATCGCGG
CACCGCTGCGGCGCCTGGCCGAGGTGGCGCAGCGGCTGGCCCGTCAGGACTATTCCGCCCAGGTGGAAAAGACCGAGCGC
AAGGATGAGATCGGCCTCCTGATCGCCGCCGTCGCCGTGCTGCGCGACGAGGCGGCCAGCGCCGCCGAAGCCCGTGCCGC
CCAGCAGGAGAGCTATCGGACGGCCAGCATTCAGCGCAAGCAGGCCCGCCTGCAACTGGCCGACGACATCGAAAGCTCCA
TCAAGCGGGTCACCGACGTGGTGGTCCAGGCGGTGGGGGAAATGGAAAGCGCCGCCGCCATCGTCTCGGGCGCGGTGGGC
GAGGCCGGAGCCAAGGCCGGAGCCGCCGCCTCCTCCGCCGAACAGGCCTCGGGCAACGTCGCCACCGTCGCGGCGGCGGC
CGAGCAACTGTCGGCTTCCATCAGCGAGATTTCCCGTCAGGTGCACGAATCCTCCGACACCTCGGGCCGAGCGGTGGCCG
AGGCCGAGCGGACCAATGCCCTGGTCCAGGGATTGGCCGAGGCGGCGGGTCACATCGGCGAGGTGGTGACCCTGATCAAC
GATATTGCCGGCCAGACCAATCTGCTGGCGCTCAATGCCACCATCGAGGCGGCCCGCGCCGGAGAGGCGGGAAAAGGGTT
CGCGGTGGTGGCGGGAGAGGTCAAGCACCTCGCCACCCAGACCGCCAAGGCCACCGACGAAATCTATAATCAGGTCAACA
CCGTCCAGGCCCGCACCAGGGAGGCGGTGGATGCCATCGCCTCCATTGCCGCCACTATCGGCCGCATCAATGAAATTGCC
GGAGCCATTGCGGCCGCCGTCGAGGAACAGGGCGCCGCCACGGCCGAGATCGCCCGCAACGTCCAGCAGGCCTCGGCGGG
CACCCAGGAGGTCTCCTCCGCCATGGGGTCATTGGCCGCCGCCACCGCCTCGGCGGGAAGCAGCGCCGATTCCGTCCAGG
GCATCGCCAAGCGGCTGACCTCGGAGGCCCAGGCCCTCGACCGCGAGGTTCACCAGTTCATGGTCTCCATGCGCAGCGAC
CAGGGGGCGGAAAGCTAG

Upstream 100 bases:

>100_bases
CCGGCTGAACGACCTGATCGTTCACCGCTGGAAGTTATAGGCCGACAGGATTACTCTTTAGCCAATGGCGATATAAGCCA
ATGTTGGGGAGGAGGAATCC

Downstream 100 bases:

>100_bases
AATGATCGGAAGGCTGCTGATCGCCGTCCTCCTCGGCTGGGGTGCCTCCGCCCTGGCTGTGGAGGTTCCTCCGCCGGAGG
AGTTGCGTGCCGCCGCCATC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MLGKSGILLKLMTTAVLALVGFAILSAVALTQLRQSMLNDRIEKVAALAEVARGTLKSFHDRAKAGEFDEATAKAQAIET
LRPLRYQGDEYFFIYDFDGVNVLHPVRPEREGKNFIDSKDADGKAYIRGMIEGSKTGRAVEFYKFPRPGSDAPVPKVSVA
LSHAPWKLMVGTGIYIDDIDTAFNAAALRFAGIALVVCLVALGLVTVLSRDIAAPLRRLAEVAQRLARQDYSAQVEKTER
KDEIGLLIAAVAVLRDEAASAAEARAAQQESYRTASIQRKQARLQLADDIESSIKRVTDVVVQAVGEMESAAAIVSGAVG
EAGAKAGAAASSAEQASGNVATVAAAAEQLSASISEISRQVHESSDTSGRAVAEAERTNALVQGLAEAAGHIGEVVTLIN
DIAGQTNLLALNATIEAARAGEAGKGFAVVAGEVKHLATQTAKATDEIYNQVNTVQARTREAVDAIASIAATIGRINEIA
GAIAAAVEEQGAATAEIARNVQQASAGTQEVSSAMGSLAAATASAGSSADSVQGIAKRLTSEAQALDREVHQFMVSMRSD
QGAES

Sequences:

>Translated_565_residues
MLGKSGILLKLMTTAVLALVGFAILSAVALTQLRQSMLNDRIEKVAALAEVARGTLKSFHDRAKAGEFDEATAKAQAIET
LRPLRYQGDEYFFIYDFDGVNVLHPVRPEREGKNFIDSKDADGKAYIRGMIEGSKTGRAVEFYKFPRPGSDAPVPKVSVA
LSHAPWKLMVGTGIYIDDIDTAFNAAALRFAGIALVVCLVALGLVTVLSRDIAAPLRRLAEVAQRLARQDYSAQVEKTER
KDEIGLLIAAVAVLRDEAASAAEARAAQQESYRTASIQRKQARLQLADDIESSIKRVTDVVVQAVGEMESAAAIVSGAVG
EAGAKAGAAASSAEQASGNVATVAAAAEQLSASISEISRQVHESSDTSGRAVAEAERTNALVQGLAEAAGHIGEVVTLIN
DIAGQTNLLALNATIEAARAGEAGKGFAVVAGEVKHLATQTAKATDEIYNQVNTVQARTREAVDAIASIAATIGRINEIA
GAIAAAVEEQGAATAEIARNVQQASAGTQEVSSAMGSLAAATASAGSSADSVQGIAKRLTSEAQALDREVHQFMVSMRSD
QGAES
>Mature_565_residues
MLGKSGILLKLMTTAVLALVGFAILSAVALTQLRQSMLNDRIEKVAALAEVARGTLKSFHDRAKAGEFDEATAKAQAIET
LRPLRYQGDEYFFIYDFDGVNVLHPVRPEREGKNFIDSKDADGKAYIRGMIEGSKTGRAVEFYKFPRPGSDAPVPKVSVA
LSHAPWKLMVGTGIYIDDIDTAFNAAALRFAGIALVVCLVALGLVTVLSRDIAAPLRRLAEVAQRLARQDYSAQVEKTER
KDEIGLLIAAVAVLRDEAASAAEARAAQQESYRTASIQRKQARLQLADDIESSIKRVTDVVVQAVGEMESAAAIVSGAVG
EAGAKAGAAASSAEQASGNVATVAAAAEQLSASISEISRQVHESSDTSGRAVAEAERTNALVQGLAEAAGHIGEVVTLIN
DIAGQTNLLALNATIEAARAGEAGKGFAVVAGEVKHLATQTAKATDEIYNQVNTVQARTREAVDAIASIAATIGRINEIA
GAIAAAVEEQGAATAEIARNVQQASAGTQEVSSAMGSLAAATASAGSSADSVQGIAKRLTSEAQALDREVHQFMVSMRSD
QGAES

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=220, Percent_Identity=36.8181818181818, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI2367378, Length=389, Percent_Identity=28.0205655526992, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1789453, Length=337, Percent_Identity=29.9703264094956, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1788195, Length=242, Percent_Identity=31.8181818181818, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1787690, Length=243, Percent_Identity=31.2757201646091, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58952; Mature: 58952

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKSGILLKLMTTAVLALVGFAILSAVALTQLRQSMLNDRIEKVAALAEVARGTLKSFH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRAKAGEFDEATAKAQAIETLRPLRYQGDEYFFIYDFDGVNVLHPVRPEREGKNFIDSKD
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCC
ADGKAYIRGMIEGSKTGRAVEFYKFPRPGSDAPVPKVSVALSHAPWKLMVGTGIYIDDID
CCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECCEEEECHH
TAFNAAALRFAGIALVVCLVALGLVTVLSRDIAAPLRRLAEVAQRLARQDYSAQVEKTER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KDEIGLLIAAVAVLRDEAASAAEARAAQQESYRTASIQRKQARLQLADDIESSIKRVTDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVQAVGEMESAAAIVSGAVGEAGAKAGAAASSAEQASGNVATVAAAAEQLSASISEISRQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VHESSDTSGRAVAEAERTNALVQGLAEAAGHIGEVVTLINDIAGQTNLLALNATIEAARA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHC
GEAGKGFAVVAGEVKHLATQTAKATDEIYNQVNTVQARTREAVDAIASIAATIGRINEIA
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIAAAVEEQGAATAEIARNVQQASAGTQEVSSAMGSLAAATASAGSSADSVQGIAKRLT
HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SEAQALDREVHQFMVSMRSDQGAES
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLGKSGILLKLMTTAVLALVGFAILSAVALTQLRQSMLNDRIEKVAALAEVARGTLKSFH
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRAKAGEFDEATAKAQAIETLRPLRYQGDEYFFIYDFDGVNVLHPVRPEREGKNFIDSKD
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCC
ADGKAYIRGMIEGSKTGRAVEFYKFPRPGSDAPVPKVSVALSHAPWKLMVGTGIYIDDID
CCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEECCEEEECHH
TAFNAAALRFAGIALVVCLVALGLVTVLSRDIAAPLRRLAEVAQRLARQDYSAQVEKTER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KDEIGLLIAAVAVLRDEAASAAEARAAQQESYRTASIQRKQARLQLADDIESSIKRVTDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVQAVGEMESAAAIVSGAVGEAGAKAGAAASSAEQASGNVATVAAAAEQLSASISEISRQ
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VHESSDTSGRAVAEAERTNALVQGLAEAAGHIGEVVTLINDIAGQTNLLALNATIEAARA
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHC
GEAGKGFAVVAGEVKHLATQTAKATDEIYNQVNTVQARTREAVDAIASIAATIGRINEIA
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIAAAVEEQGAATAEIARNVQQASAGTQEVSSAMGSLAAATASAGSSADSVQGIAKRLT
HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
SEAQALDREVHQFMVSMRSDQGAES
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]