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The map label for this gene is 83310296

Identifier: 83310296

GI number: 83310296

Start: 1270845

End: 1272419

Strand: Reverse

Name: 83310296

Synonym: amb1197

Alternate gene names: NA

Gene position: 1272419-1270845 (Counterclockwise)

Preceding gene: 83310302

Following gene: 83310295

Centisome position: 25.62

GC content: 60.63

Gene sequence:

>1575_bases
GTGACGGATGAGAACCGACAGGAGTTAAGCAGCGGTTCTTCCGCCGGACCTCCACGTATTCGGGTCGCACAATACGTGCG
GATGTCCACCGAGCATCAACAGTACTCGACCGAAAATCAGGCCGATGCCATCCGGCAGTACGCGGATGACCACGGCTTTG
AAATCGTGCGGACCTATCGTGACGATGGCAAAAGCGGCCTGCGTCTGGATGGCCGCAAGGCGCTGCAGAATTTACTAGAT
GACGTTCAGAGCGGTCGGGCCGACTTTTCCATTGTGCTGGTTTACGACGTCAGCCGCTGGGGCCGGTTCCAAAATCCCGA
CGAGGGCGCCTATTACGAACTGTGCTGCGATCTGGCCGGTATCGCCGTCCATTATTGCGCCGAGCAATTCGACAACGACG
GCAGCCCGTTTTCCCACATCATCAAGGCCCTGAAGCGGACCATGGCCGGTGAATATTGCCGGGAATTATCGGTCAAGGTC
TTCACCGGCCAGCGCCGATTGATCACGCTGGGCTATCGGCAAGGCGGCCCGGCCGGTTTCGGTCTGCGCCGCCAGTTGAT
CGACCATACCGGAACCCAGAAGAACGTCCTGGATAGGGGCGAGCAGAAGAGCATTCAGACCGACCGCGTCATCCTGATTC
CCGGCCCGCCCGAGGAAATTGAAGTCGTCCGGTCCATCTACCGCGCCTTCGTCGTGGACGGGAAGTCGGAGCGCGAGATC
GCCCTGGCGCTCAATGGACGCGGGATCGCCACGGATCTCGGCCGACCGTGGACACGCGGCACCGTCCACCAGGTGCTGAT
CAATGAGAAATACATCGGCAACAATGTCTGGAACCGCCGCTCCTTCAAGCTGAAGAAAAAGCGTGTCGAAAATGCCCCGG
ACGATTGGGTGCGGGCCGATGCCGTTTTTTCCCCGATCATCGACCATGCCCTATTTGACGCGGCCCAAACCATCATCCGG
GGGCGCTCACAACGGCTGTCGAGCGAAGAGATGCTGGAGTTATTGCGGGAGTTGCTGGAGCGGCGGGGCTTTCTGTCCGG
CATCATGATCGACGAGGCGGACCATTGCCCATCCAGCAGCGCCTATCAAAGCCGCTTCGGCAGCCTGCTCAGAGCCTATG
AACTGGTCGGCTTCACTCCCGACCGGGATTATCGCTATATCGAGATCAACCGGCTCCTGCGGCGGATGCATCCGCAAGTC
CTGGCCGACACCGTTGCCGGGATCGAGCAGACTGGCGGCCGCGTGGAGCAAGACCCGGTCACCGACCTTTTGACCATCAA
CCGGGAATTCACCGCCTCGCTGGTGATCGTCCGCTGCCAGGAAACACCGGCAGGATCGCTCCGCTGGCATATCCGCCTTG
ATACGGGTCTCTGTCCGGACATCACCATCGCCGTGCGGATGGACCCGGCGAACGCTCAAGCGCGCGACTATTATCTCCTT
CCCAACCGGGACATGACCGGGCCGAGGCTCCGCCTGGGTGAACACAACGGAATCGCGCTGGACTCCTTTCGTTTCGACAC
CCTTGAACCGTTGTTCGGCATGGCCGCGCGGATCGGATTGCTGGAGGTTGCATGA

Upstream 100 bases:

>100_bases
CCGGTGTTTGCCGGAAAAACTTTGCCCTTTTTCGGCAACATTTTTCCCTCTCCTTCCTTGTAATATTCAGCAAATCAAGG
AAAGGAAGGATGCAGTTACG

Downstream 100 bases:

>100_bases
TGGTGGAAAGTTCCGGTCAGGCCATCGAACTGATTCCGATGGATCGGATCAGGGTGATCAATCCCCGGCTGCGCAATCAG
AAGGTCTTCCGGGATATCGT

Product: site-specific recombinase

Products: NA

Alternate protein names: Resolvase Domain-Containing Protein; Resolvase Domain Protein; Site-Specific Recombinase; Resolvase Domain; Resolvase; Resolvase Family Site-Specific Recombinase; DNA Recombinase; Site-Specific DNA Recombinase; Recombinase-Like Protein; Recombinase Family; Recombinase Protein; Conjugative Transposon Site-Specific Recombinase; Resolvase-Like Protein; Site-Specific Recombinase Resolvase Family; Resolvase Domain Protein PinR Type; LOW QUALITY PROTEIN Resolvase Domain Protein; Integrase

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MTDENRQELSSGSSAGPPRIRVAQYVRMSTEHQQYSTENQADAIRQYADDHGFEIVRTYRDDGKSGLRLDGRKALQNLLD
DVQSGRADFSIVLVYDVSRWGRFQNPDEGAYYELCCDLAGIAVHYCAEQFDNDGSPFSHIIKALKRTMAGEYCRELSVKV
FTGQRRLITLGYRQGGPAGFGLRRQLIDHTGTQKNVLDRGEQKSIQTDRVILIPGPPEEIEVVRSIYRAFVVDGKSEREI
ALALNGRGIATDLGRPWTRGTVHQVLINEKYIGNNVWNRRSFKLKKKRVENAPDDWVRADAVFSPIIDHALFDAAQTIIR
GRSQRLSSEEMLELLRELLERRGFLSGIMIDEADHCPSSSAYQSRFGSLLRAYELVGFTPDRDYRYIEINRLLRRMHPQV
LADTVAGIEQTGGRVEQDPVTDLLTINREFTASLVIVRCQETPAGSLRWHIRLDTGLCPDITIAVRMDPANAQARDYYLL
PNRDMTGPRLRLGEHNGIALDSFRFDTLEPLFGMAARIGLLEVA

Sequences:

>Translated_524_residues
MTDENRQELSSGSSAGPPRIRVAQYVRMSTEHQQYSTENQADAIRQYADDHGFEIVRTYRDDGKSGLRLDGRKALQNLLD
DVQSGRADFSIVLVYDVSRWGRFQNPDEGAYYELCCDLAGIAVHYCAEQFDNDGSPFSHIIKALKRTMAGEYCRELSVKV
FTGQRRLITLGYRQGGPAGFGLRRQLIDHTGTQKNVLDRGEQKSIQTDRVILIPGPPEEIEVVRSIYRAFVVDGKSEREI
ALALNGRGIATDLGRPWTRGTVHQVLINEKYIGNNVWNRRSFKLKKKRVENAPDDWVRADAVFSPIIDHALFDAAQTIIR
GRSQRLSSEEMLELLRELLERRGFLSGIMIDEADHCPSSSAYQSRFGSLLRAYELVGFTPDRDYRYIEINRLLRRMHPQV
LADTVAGIEQTGGRVEQDPVTDLLTINREFTASLVIVRCQETPAGSLRWHIRLDTGLCPDITIAVRMDPANAQARDYYLL
PNRDMTGPRLRLGEHNGIALDSFRFDTLEPLFGMAARIGLLEVA
>Mature_523_residues
TDENRQELSSGSSAGPPRIRVAQYVRMSTEHQQYSTENQADAIRQYADDHGFEIVRTYRDDGKSGLRLDGRKALQNLLDD
VQSGRADFSIVLVYDVSRWGRFQNPDEGAYYELCCDLAGIAVHYCAEQFDNDGSPFSHIIKALKRTMAGEYCRELSVKVF
TGQRRLITLGYRQGGPAGFGLRRQLIDHTGTQKNVLDRGEQKSIQTDRVILIPGPPEEIEVVRSIYRAFVVDGKSEREIA
LALNGRGIATDLGRPWTRGTVHQVLINEKYIGNNVWNRRSFKLKKKRVENAPDDWVRADAVFSPIIDHALFDAAQTIIRG
RSQRLSSEEMLELLRELLERRGFLSGIMIDEADHCPSSSAYQSRFGSLLRAYELVGFTPDRDYRYIEINRLLRRMHPQVL
ADTVAGIEQTGGRVEQDPVTDLLTINREFTASLVIVRCQETPAGSLRWHIRLDTGLCPDITIAVRMDPANAQARDYYLLP
NRDMTGPRLRLGEHNGIALDSFRFDTLEPLFGMAARIGLLEVA

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59292; Mature: 59161

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDENRQELSSGSSAGPPRIRVAQYVRMSTEHQQYSTENQADAIRQYADDHGFEIVRTYR
CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEC
DDGKSGLRLDGRKALQNLLDDVQSGRADFSIVLVYDVSRWGRFQNPDEGAYYELCCDLAG
CCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEEEEECHHCCCCCCCCCCCHHHHHHHHHH
IAVHYCAEQFDNDGSPFSHIIKALKRTMAGEYCRELSVKVFTGQRRLITLGYRQGGPAGF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCH
GLRRQLIDHTGTQKNVLDRGEQKSIQTDRVILIPGPPEEIEVVRSIYRAFVVDGKSEREI
HHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEE
ALALNGRGIATDLGRPWTRGTVHQVLINEKYIGNNVWNRRSFKLKKKRVENAPDDWVRAD
EEEECCCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
AVFSPIIDHALFDAAQTIIRGRSQRLSSEEMLELLRELLERRGFLSGIMIDEADHCPSSS
HHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCH
AYQSRFGSLLRAYELVGFTPDRDYRYIEINRLLRRMHPQVLADTVAGIEQTGGRVEQDPV
HHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCC
TDLLTINREFTASLVIVRCQETPAGSLRWHIRLDTGLCPDITIAVRMDPANAQARDYYLL
HHHHHCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEE
PNRDMTGPRLRLGEHNGIALDSFRFDTLEPLFGMAARIGLLEVA
CCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDENRQELSSGSSAGPPRIRVAQYVRMSTEHQQYSTENQADAIRQYADDHGFEIVRTYR
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEC
DDGKSGLRLDGRKALQNLLDDVQSGRADFSIVLVYDVSRWGRFQNPDEGAYYELCCDLAG
CCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEEEEECHHCCCCCCCCCCCHHHHHHHHHH
IAVHYCAEQFDNDGSPFSHIIKALKRTMAGEYCRELSVKVFTGQRRLITLGYRQGGPAGF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCH
GLRRQLIDHTGTQKNVLDRGEQKSIQTDRVILIPGPPEEIEVVRSIYRAFVVDGKSEREI
HHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEE
ALALNGRGIATDLGRPWTRGTVHQVLINEKYIGNNVWNRRSFKLKKKRVENAPDDWVRAD
EEEECCCCCCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
AVFSPIIDHALFDAAQTIIRGRSQRLSSEEMLELLRELLERRGFLSGIMIDEADHCPSSS
HHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCH
AYQSRFGSLLRAYELVGFTPDRDYRYIEINRLLRRMHPQVLADTVAGIEQTGGRVEQDPV
HHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCC
TDLLTINREFTASLVIVRCQETPAGSLRWHIRLDTGLCPDITIAVRMDPANAQARDYYLL
HHHHHCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEE
PNRDMTGPRLRLGEHNGIALDSFRFDTLEPLFGMAARIGLLEVA
CCCCCCCCCEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA