Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83310078

Identifier: 83310078

GI number: 83310078

Start: 1039265

End: 1039930

Strand: Reverse

Name: 83310078

Synonym: amb0979

Alternate gene names: NA

Gene position: 1039930-1039265 (Counterclockwise)

Preceding gene: 83310081

Following gene: 83310059

Centisome position: 20.94

GC content: 60.21

Gene sequence:

>666_bases
ATGGCCGCAACATCCGGCGGCGGCCGAGGCCCCGATATCGAGCATCTGCCACCGTCCAACCGCCGCGTCCAGGTTGTCCA
AGAGGCCCTGCGCATCTCTCAAGAGCTTCAAGCCCTGCTTCACGACCCCGCCGAGGAAAACGCCAAGGCGAAGATCAGCG
ACCATTTCAATCGTCTGATGAACCTCATGGGGCTGGTCCACGGCTATTGCCGGGAGGAAGGCGAGGCAGGGTCCTTCTTC
AAAAAGAAATACGCCGAGATCATGCGGACCGTCAGTAAGTTCTCGTTGGGAATCCTGGCCTCCGGCCTCGAACGGACCGT
CCAGGAATCGTCTCGGATCGTCGATGGAACCACCCCCGCCGCATTGGGAGCGTCGTCGAAGATCTTTTACAAGATGTCCG
AATTCGACACCTTGATCACAATGCTCGGCGGCTACCCCTCGCTCTCCCTCGACCTGTTGGAGATGATCAAGACCGGATGG
CAGAACGTGCTGTCGCTGACGGCCCGAGACGATACCCTCAGCGAGCTGGAAAAGGATGACGCCGCACCGCTGAAGCTTGT
GGCCGCCAAGCGACTGAACGATGCGGATGTAATCTTGCAAGAGCGCCGCGCCGCCGATTCCCAAGAGGCCGCCTTCCAGC
GCCTCAACCAATCGCCAACAGCGTAG

Upstream 100 bases:

>100_bases
GTCCGCCGCCGCCCGGCCCGAAAATGCCGCCGAGGCGCCGAGCGGCGCGACCGCCGAGACGCCAAGCCGGCCGCCGTCCA
AAGCCACCGCCGGAATCGGC

Downstream 100 bases:

>100_bases
CGGCCCCGGTCCCTATAGCGGCGAGCGCCAAATCCGGCGCACGCCGCGATCAGCCGCCATTGCGGCTGTGGCCAAGCGGC
CGGAGGGCCGCGGACGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MAATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLMNLMGLVHGYCREEGEAGSFF
KKKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPAALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGW
QNVLSLTARDDTLSELEKDDAAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA

Sequences:

>Translated_221_residues
MAATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLMNLMGLVHGYCREEGEAGSFF
KKKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPAALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGW
QNVLSLTARDDTLSELEKDDAAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA
>Mature_220_residues
AATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLMNLMGLVHGYCREEGEAGSFFK
KKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPAALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGWQ
NVLSLTARDDTLSELEKDDAAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24237; Mature: 24106

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLM
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH
NLMGLVHGYCREEGEAGSFFKKKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGWQNVLSLTARDDTLSELEKDD
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
AAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA
CCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AATSGGGRGPDIEHLPPSNRRVQVVQEALRISQELQALLHDPAEENAKAKISDHFNRLM
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH
NLMGLVHGYCREEGEAGSFFKKKYAEIMRTVSKFSLGILASGLERTVQESSRIVDGTTPA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
ALGASSKIFYKMSEFDTLITMLGGYPSLSLDLLEMIKTGWQNVLSLTARDDTLSELEKDD
HHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
AAPLKLVAAKRLNDADVILQERRAADSQEAAFQRLNQSPTA
CCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA