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The map label for this gene is yjiN [H]

Identifier: 83310059

GI number: 83310059

Start: 1020167

End: 1021435

Strand: Reverse

Name: yjiN [H]

Synonym: amb0960

Alternate gene names: 83310059

Gene position: 1021435-1020167 (Counterclockwise)

Preceding gene: 83310078

Following gene: 83310053

Centisome position: 20.56

GC content: 63.83

Gene sequence:

>1269_bases
ATGCTCTCTTCACCAGAAGATAACGATAATCGAACGCAACATGCCGGACTTTCCCGCATGCGGACTTATGCTACGGCTTT
GCTTGCCTTGATCTCCGCTGTGTTCGCATTCTCCGTTTGGGGCGAGAAAGCCTGGCCCTGGCTGGCGCCGGTTCGGGCCT
TCGCCGAAGCCGCCCTGGTCGGCGGCATCGCCGATTGGTTCGCGGTTACCGCCCTGTTTCGCCATCCTTTCGGACTTCCC
ATCCCCCACACCGCCGTCATTCCCCGCAATCACGGCCGGATCGCCGCCGCCATCGGCCGGTTCGTCGCCGACAACCTGCT
GGCGTCGCAGGCGCTGGCCCAACGGCTGGAGGAACTCGATACCGCCGGACGGCTGGGGCGCTGGCTGGCCCGGCCTGAGA
CGGCGGCCATGATCGCCGCCCGGATCGCCGGATCGCTCCCCCCCATCGTCGATACAATCGGCGAGCAACGGTGGCGCAGC
ACCATCGGCGGCGGTCTGCGCAAGGTGGTCGATACCGCCATCACCGCCCCGCGCATGGCCAACATCTTGTCCTACATGGT
GGGGCGCGGCTATCACCACGCCATCTTGGATCATCTGGTGACCGAGGCCCGCTCCTTCGTCGCCCAGAACCGTTCATTCA
TCCGCGCCAAGGTCGCCAAGGAATGTCCGGAATGGCTGCCGCTGTGGGTGGAGACCCAGATCGCACAGGGCGTCACCCAA
GGCATCGACGGCTCACTGGGGGAGCTGACCGCCCCCGACCATCCCTGGCGGCTGAAATTCGAGCTCTTCGTCCACGAAAC
CATCGACGGCATGACCAATTCGCCGCATTTTGCCCAGCGGATCGAGGAGGTCAAGATGCAGGTTCTCGACGATCCCGCCC
TGGATGCCTATCTCCGCCAGTTGGGAAGCAGCGCCTACGACCACCTGATGGAGGAGGCCAAGACCATGGAGATGCTCCTT
GAAAACGGCCTGCGCGAGATCGGTCAACGGCTGGAGCACGACACCGCCATGCGGGCGACCCTGAACCGCTGGCTGCGCGA
CGCCACCGAAGCCTTGCTGGTGCCCCGGCGCGAGCTGATAGGCTCGCTGATCACCGATCTGGTCATGCGCTGGCGCACCC
CGTTCCTGATCGAGAAGCTGGAAAGCCATGTGGGCAAGGATCTTCAGTATATCCGCATTAACGGCACCGTGGTCGGCGGC
CTGGTAGGATTGGCCATCTACACGGTCACGACGCTGGCTCAGCGCAAGTGCATCAGCTCGTTTTTCTAG

Upstream 100 bases:

>100_bases
ATACGAAGGTACCCCGTAATCCGCCGCTGCAGCGGATTGCGTATATATGCTCGAAACAAAAAGTCTCGATTTCCTGCCGC
CACCCTCGGATTCGGATCAG

Downstream 100 bases:

>100_bases
AGTTTCTCGATTTCTGATTCGGCTTGAATGCGAGAAACTCTAGGCTCGGCGGGAGCGGGCGGAGCCTCCGCCGACGGCGG
GACACTCGCGGGGGCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLSSPEDNDNRTQHAGLSRMRTYATALLALISAVFAFSVWGEKAWPWLAPVRAFAEAALVGGIADWFAVTALFRHPFGLP
IPHTAVIPRNHGRIAAAIGRFVADNLLASQALAQRLEELDTAGRLGRWLARPETAAMIAARIAGSLPPIVDTIGEQRWRS
TIGGGLRKVVDTAITAPRMANILSYMVGRGYHHAILDHLVTEARSFVAQNRSFIRAKVAKECPEWLPLWVETQIAQGVTQ
GIDGSLGELTAPDHPWRLKFELFVHETIDGMTNSPHFAQRIEEVKMQVLDDPALDAYLRQLGSSAYDHLMEEAKTMEMLL
ENGLREIGQRLEHDTAMRATLNRWLRDATEALLVPRRELIGSLITDLVMRWRTPFLIEKLESHVGKDLQYIRINGTVVGG
LVGLAIYTVTTLAQRKCISSFF

Sequences:

>Translated_422_residues
MLSSPEDNDNRTQHAGLSRMRTYATALLALISAVFAFSVWGEKAWPWLAPVRAFAEAALVGGIADWFAVTALFRHPFGLP
IPHTAVIPRNHGRIAAAIGRFVADNLLASQALAQRLEELDTAGRLGRWLARPETAAMIAARIAGSLPPIVDTIGEQRWRS
TIGGGLRKVVDTAITAPRMANILSYMVGRGYHHAILDHLVTEARSFVAQNRSFIRAKVAKECPEWLPLWVETQIAQGVTQ
GIDGSLGELTAPDHPWRLKFELFVHETIDGMTNSPHFAQRIEEVKMQVLDDPALDAYLRQLGSSAYDHLMEEAKTMEMLL
ENGLREIGQRLEHDTAMRATLNRWLRDATEALLVPRRELIGSLITDLVMRWRTPFLIEKLESHVGKDLQYIRINGTVVGG
LVGLAIYTVTTLAQRKCISSFF
>Mature_422_residues
MLSSPEDNDNRTQHAGLSRMRTYATALLALISAVFAFSVWGEKAWPWLAPVRAFAEAALVGGIADWFAVTALFRHPFGLP
IPHTAVIPRNHGRIAAAIGRFVADNLLASQALAQRLEELDTAGRLGRWLARPETAAMIAARIAGSLPPIVDTIGEQRWRS
TIGGGLRKVVDTAITAPRMANILSYMVGRGYHHAILDHLVTEARSFVAQNRSFIRAKVAKECPEWLPLWVETQIAQGVTQ
GIDGSLGELTAPDHPWRLKFELFVHETIDGMTNSPHFAQRIEEVKMQVLDDPALDAYLRQLGSSAYDHLMEEAKTMEMLL
ENGLREIGQRLEHDTAMRATLNRWLRDATEALLVPRRELIGSLITDLVMRWRTPFLIEKLESHVGKDLQYIRINGTVVGG
LVGLAIYTVTTLAQRKCISSFF

Specific function: Unknown

COG id: COG2733

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790793, Length=388, Percent_Identity=29.639175257732, Blast_Score=172, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007383 [H]

Pfam domain/function: PF04286 DUF445 [H]

EC number: NA

Molecular weight: Translated: 46951; Mature: 46951

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSPEDNDNRTQHAGLSRMRTYATALLALISAVFAFSVWGEKAWPWLAPVRAFAEAALV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GGIADWFAVTALFRHPFGLPIPHTAVIPRNHGRIAAAIGRFVADNLLASQALAQRLEELD
HHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAGRLGRWLARPETAAMIAARIAGSLPPIVDTIGEQRWRSTIGGGLRKVVDTAITAPRMA
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
NILSYMVGRGYHHAILDHLVTEARSFVAQNRSFIRAKVAKECPEWLPLWVETQIAQGVTQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
GIDGSLGELTAPDHPWRLKFELFVHETIDGMTNSPHFAQRIEEVKMQVLDDPALDAYLRQ
CCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LGSSAYDHLMEEAKTMEMLLENGLREIGQRLEHDTAMRATLNRWLRDATEALLVPRRELI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GSLITDLVMRWRTPFLIEKLESHVGKDLQYIRINGTVVGGLVGLAIYTVTTLAQRKCISS
HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
FF
CC
>Mature Secondary Structure
MLSSPEDNDNRTQHAGLSRMRTYATALLALISAVFAFSVWGEKAWPWLAPVRAFAEAALV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GGIADWFAVTALFRHPFGLPIPHTAVIPRNHGRIAAAIGRFVADNLLASQALAQRLEELD
HHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAGRLGRWLARPETAAMIAARIAGSLPPIVDTIGEQRWRSTIGGGLRKVVDTAITAPRMA
HHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
NILSYMVGRGYHHAILDHLVTEARSFVAQNRSFIRAKVAKECPEWLPLWVETQIAQGVTQ
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
GIDGSLGELTAPDHPWRLKFELFVHETIDGMTNSPHFAQRIEEVKMQVLDDPALDAYLRQ
CCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
LGSSAYDHLMEEAKTMEMLLENGLREIGQRLEHDTAMRATLNRWLRDATEALLVPRRELI
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GSLITDLVMRWRTPFLIEKLESHVGKDLQYIRINGTVVGGLVGLAIYTVTTLAQRKCISS
HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
FF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]