| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309908
Identifier: 83309908
GI number: 83309908
Start: 866845
End: 867378
Strand: Reverse
Name: 83309908
Synonym: amb0809
Alternate gene names: NA
Gene position: 867378-866845 (Counterclockwise)
Preceding gene: 83309909
Following gene: 83309907
Centisome position: 17.46
GC content: 67.42
Gene sequence:
>534_bases ATGACGGAACTCCTCTATCCGCCGGCGGAGCGCCGCGCTCACGACGTCATCGACCGCTGGCTCAACCGCGCCGCCGAGGC CATGGCCTGGACCGGCGGGGCCACCCTGGTGGCCATGGTGATCATGTCGCTGATCTCCATCATCAGCCGCAAGCTGGGCT TCCAGCCCGTCAACGGCGACGTGGAAATGATGCAGATGGGCAACGCCATCGCGGCGGCCGCCTTCATCCCGCTGTGCACG CTGCGGGGCGATCACCTGCGCGTCGAGTTCTTCACCGAGGGCTTCCGTCCCAAGGTCAAGCGCCGCTTCGACGCGGTGGG CGATTCCCTGCTGGCCCTGGTCCTGGCCGTGCTGGCCTGGCGCACCGGCTTCCAGGCCCTGGACGGCCTCGATACCGGCG AGGTTTCGCCCCTGCTGGCAGTGCCCCAGTGGATTCCCGTGCTGCTGATGGTGCCGAGTCTGGCGCTCACCGGCATCTGC GCCATCTACCGCACCGCCCTTGAATTCACCGTCGGACTGGAGATTCCGTCATGA
Upstream 100 bases:
>100_bases GACGGACAGGCCCTGGCGGCGGGCGCCCGCGCGCTTTCGGCCAAGTATTTCCCGGCCCAGAACTGATCTCCACCCGCACT CGCGCATAAGGACTCGTCCC
Downstream 100 bases:
>100_bases GCGGCACCACCCTCGGCCTGACCGCCTTCGGCATCCTGCTGCTGATGCTGGTGGTGCGCATCCACATCGGAATCGCCATG TTCCTGGCCGCCACCGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTELLYPPAERRAHDVIDRWLNRAAEAMAWTGGATLVAMVIMSLISIISRKLGFQPVNGDVEMMQMGNAIAAAAFIPLCT LRGDHLRVEFFTEGFRPKVKRRFDAVGDSLLALVLAVLAWRTGFQALDGLDTGEVSPLLAVPQWIPVLLMVPSLALTGIC AIYRTALEFTVGLEIPS
Sequences:
>Translated_177_residues MTELLYPPAERRAHDVIDRWLNRAAEAMAWTGGATLVAMVIMSLISIISRKLGFQPVNGDVEMMQMGNAIAAAAFIPLCT LRGDHLRVEFFTEGFRPKVKRRFDAVGDSLLALVLAVLAWRTGFQALDGLDTGEVSPLLAVPQWIPVLLMVPSLALTGIC AIYRTALEFTVGLEIPS >Mature_176_residues TELLYPPAERRAHDVIDRWLNRAAEAMAWTGGATLVAMVIMSLISIISRKLGFQPVNGDVEMMQMGNAIAAAAFIPLCTL RGDHLRVEFFTEGFRPKVKRRFDAVGDSLLALVLAVLAWRTGFQALDGLDTGEVSPLLAVPQWIPVLLMVPSLALTGICA IYRTALEFTVGLEIPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19338; Mature: 19207
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELLYPPAERRAHDVIDRWLNRAAEAMAWTGGATLVAMVIMSLISIISRKLGFQPVNGD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC VEMMQMGNAIAAAAFIPLCTLRGDHLRVEFFTEGFRPKVKRRFDAVGDSLLALVLAVLAW HHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RTGFQALDGLDTGEVSPLLAVPQWIPVLLMVPSLALTGICAIYRTALEFTVGLEIPS HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TELLYPPAERRAHDVIDRWLNRAAEAMAWTGGATLVAMVIMSLISIISRKLGFQPVNGD CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC VEMMQMGNAIAAAAFIPLCTLRGDHLRVEFFTEGFRPKVKRRFDAVGDSLLALVLAVLAW HHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH RTGFQALDGLDTGEVSPLLAVPQWIPVLLMVPSLALTGICAIYRTALEFTVGLEIPS HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA