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The map label for this gene is yiaO [C]

Identifier: 83309909

GI number: 83309909

Start: 867413

End: 868528

Strand: Reverse

Name: yiaO [C]

Synonym: amb0810

Alternate gene names: 83309909

Gene position: 868528-867413 (Counterclockwise)

Preceding gene: 83309912

Following gene: 83309908

Centisome position: 17.49

GC content: 68.28

Gene sequence:

>1116_bases
ATGACGGTCCGGGCCATGTCCCCGGCCGCACTTGCCCGAATGCGGCTCAACACGGAGGAAACCATGCGTATCAGGAGCCT
TGCCCTCAGCCTTGCCGCCCTTCTTGGCGCCCTGCCCTTCGCCCATCAGGCGGCGGCGGCCGACGAGGTGGTGCTGAAAT
TCGCCCATTTCCTGCCGCCCGTGGCCCCGGCCCATGCCCAGGTGATCGGCCCGTGGTGCGACCGTGTCGCCGCCGAATCG
GGCAACCGCATCAAGTGTCAGATCTTTCCCGCCATGCAATTGGGCGGCACGCCGTCGCAACTGGTGGATCAGGTGAGGAA
CGGCGTGGCCGACATCGTGTGGACGGCGCCGGGCTATTCCGCCGGCCGCTTCCCGGCCATCGAGGCGCTGGAGCTGCCCT
TCATGGTGGCCAACGCCCTGGACGGCAGCCGCATGACCTGGGACTACTACAACCAGTTCGCCAAGGACGAATTCGCCGCC
TACAAGGTGCTGGCGGTTCACATTGACGGCGGCGGGCTGTTCCACACCGCCAATACCGAGGTGAAGAGCCTGGCCGAGGT
CAAGGGCCTGAAGCTGCGCACCCCCACCCGCCTGGCGGCCAAGACCCTGCAGTCGCTGGGCGGCGTGCCGGTCTCCATGC
CGCCGTCCCAGGTGGCCGACGCCATCGCCAAGGGCGTGGTCGACGGCGGCCTGCTGCCGTGGGAGCTGATGCGCCCGACC
AAGATCGACGAGGTCACCAAGTACCACATCGCCCCGCCTCCCGGCCGCCCCTTCCCGGTGGCCACCGTGCTGTCGGTGCT
GATGAACAAGGCCAAGTACGACTCGCTGCCCGCCGACCTCAAGGCGGTGATCGACCGCAATTCCGGCCCGGTGCTGGTGG
AAGCCTTCGGCAAGGTCTGGGACGACGTCACCGCCGCCAACCTGAAATACGCCGCCACCATTCCCGGCACCCAGGTGACC
AACCTGGAGCCCGCCCCCTACCAGGCCATGCGCGACGCGGCCAAGCCGGTGGAGGAGGAATGGGTCAAGGACGTCACCGC
CCGCAAGCTGGACGGACAGGCCCTGGCGGCGGGCGCCCGCGCGCTTTCGGCCAAGTATTTCCCGGCCCAGAACTGA

Upstream 100 bases:

>100_bases
GCAAATCCTCCAGGTCAACCCAACTTGGCCGTTGACTCACTAACATGATAGTGAGATCGTGTTTGCTAACATGTTAACTA
CACAGCGCATGTTAACTAAC

Downstream 100 bases:

>100_bases
TCTCCACCCGCACTCGCGCATAAGGACTCGTCCCATGACGGAACTCCTCTATCCGCCGGCGGAGCGCCGCGCTCACGACG
TCATCGACCGCTGGCTCAAC

Product: TRAP-type C4-dicarboxylate transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MTVRAMSPAALARMRLNTEETMRIRSLALSLAALLGALPFAHQAAAADEVVLKFAHFLPPVAPAHAQVIGPWCDRVAAES
GNRIKCQIFPAMQLGGTPSQLVDQVRNGVADIVWTAPGYSAGRFPAIEALELPFMVANALDGSRMTWDYYNQFAKDEFAA
YKVLAVHIDGGGLFHTANTEVKSLAEVKGLKLRTPTRLAAKTLQSLGGVPVSMPPSQVADAIAKGVVDGGLLPWELMRPT
KIDEVTKYHIAPPPGRPFPVATVLSVLMNKAKYDSLPADLKAVIDRNSGPVLVEAFGKVWDDVTAANLKYAATIPGTQVT
NLEPAPYQAMRDAAKPVEEEWVKDVTARKLDGQALAAGARALSAKYFPAQN

Sequences:

>Translated_371_residues
MTVRAMSPAALARMRLNTEETMRIRSLALSLAALLGALPFAHQAAAADEVVLKFAHFLPPVAPAHAQVIGPWCDRVAAES
GNRIKCQIFPAMQLGGTPSQLVDQVRNGVADIVWTAPGYSAGRFPAIEALELPFMVANALDGSRMTWDYYNQFAKDEFAA
YKVLAVHIDGGGLFHTANTEVKSLAEVKGLKLRTPTRLAAKTLQSLGGVPVSMPPSQVADAIAKGVVDGGLLPWELMRPT
KIDEVTKYHIAPPPGRPFPVATVLSVLMNKAKYDSLPADLKAVIDRNSGPVLVEAFGKVWDDVTAANLKYAATIPGTQVT
NLEPAPYQAMRDAAKPVEEEWVKDVTARKLDGQALAAGARALSAKYFPAQN
>Mature_370_residues
TVRAMSPAALARMRLNTEETMRIRSLALSLAALLGALPFAHQAAAADEVVLKFAHFLPPVAPAHAQVIGPWCDRVAAESG
NRIKCQIFPAMQLGGTPSQLVDQVRNGVADIVWTAPGYSAGRFPAIEALELPFMVANALDGSRMTWDYYNQFAKDEFAAY
KVLAVHIDGGGLFHTANTEVKSLAEVKGLKLRTPTRLAAKTLQSLGGVPVSMPPSQVADAIAKGVVDGGLLPWELMRPTK
IDEVTKYHIAPPPGRPFPVATVLSVLMNKAKYDSLPADLKAVIDRNSGPVLVEAFGKVWDDVTAANLKYAATIPGTQVTN
LEPAPYQAMRDAAKPVEEEWVKDVTARKLDGQALAAGARALSAKYFPAQN

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=276, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 39771; Mature: 39640

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRAMSPAALARMRLNTEETMRIRSLALSLAALLGALPFAHQAAAADEVVLKFAHFLPP
CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
VAPAHAQVIGPWCDRVAAESGNRIKCQIFPAMQLGGTPSQLVDQVRNGVADIVWTAPGYS
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCHHHHHHHHHCCCEEEEECCCCCC
AGRFPAIEALELPFMVANALDGSRMTWDYYNQFAKDEFAAYKVLAVHIDGGGLFHTANTE
CCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHEEEEEEEEECCCEEEEECCHH
VKSLAEVKGLKLRTPTRLAAKTLQSLGGVPVSMPPSQVADAIAKGVVDGGLLPWELMRPT
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCC
KIDEVTKYHIAPPPGRPFPVATVLSVLMNKAKYDSLPADLKAVIDRNSGPVLVEAFGKVW
CHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHH
DDVTAANLKYAATIPGTQVTNLEPAPYQAMRDAAKPVEEEWVKDVTARKLDGQALAAGAR
HHHHHCCEEEEEECCCCEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALSAKYFPAQN
HHHCCCCCCCC
>Mature Secondary Structure 
TVRAMSPAALARMRLNTEETMRIRSLALSLAALLGALPFAHQAAAADEVVLKFAHFLPP
CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
VAPAHAQVIGPWCDRVAAESGNRIKCQIFPAMQLGGTPSQLVDQVRNGVADIVWTAPGYS
CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHCCCCHHHHHHHHHCCCEEEEECCCCCC
AGRFPAIEALELPFMVANALDGSRMTWDYYNQFAKDEFAAYKVLAVHIDGGGLFHTANTE
CCCCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHEEEEEEEEECCCEEEEECCHH
VKSLAEVKGLKLRTPTRLAAKTLQSLGGVPVSMPPSQVADAIAKGVVDGGLLPWELMRPT
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCC
KIDEVTKYHIAPPPGRPFPVATVLSVLMNKAKYDSLPADLKAVIDRNSGPVLVEAFGKVW
CHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHH
DDVTAANLKYAATIPGTQVTNLEPAPYQAMRDAAKPVEEEWVKDVTARKLDGQALAAGAR
HHHHHCCEEEEEECCCCEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALSAKYFPAQN
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]