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The map label for this gene is yiaN [C]

Identifier: 83309907

GI number: 83309907

Start: 865520

End: 866848

Strand: Reverse

Name: yiaN [C]

Synonym: amb0808

Alternate gene names: 83309907

Gene position: 866848-865520 (Counterclockwise)

Preceding gene: 83309908

Following gene: 83309906

Centisome position: 17.45

GC content: 65.01

Gene sequence:

>1329_bases
ATGAGCGGCACCACCCTCGGCCTGACCGCCTTCGGCATCCTGCTGCTGATGCTGGTGGTGCGCATCCACATCGGAATCGC
CATGTTCCTGGCCGCCACCGGCATCTATCTGGTGCTGAACCACGGTGAACTGAACTCGCTGCTGTTCACCCTGAACAATC
TGGTCTACGCCCGGCTGTCCAATTACGACCTGGCGGTGATTCCGCTGTTCATCCTGATGGGCCAGTTCGCCACCCATGGC
GGGCTGTCCAAGGCCCTGTTCCATGCCGCCGGCACCTTGATCGGCCACTTCAAGGGCGGGCTGGCCTATGCCGCCACCGC
CGCCTGCGCCGCCTTTGGGGCCATCTGCGGCTCGTCGCTGGCCACCGCCGCCACCATGGGGCAGGTGGCGCTGCCCGAGC
TGACCCGGCGCAACTATTCCGGCCGTCTGGCCACCGGCACCCTTGCGGCCGGCGGCACGCTGGGCATCCTGATCCCGCCC
TCGGTGCCGCTGGTGGTCTATGCGGTGCTGACCCAGGAGAGCATCGGCAAGCTGTTCGTGGCCGCCGTCATCCCCGGCAT
CATCGCCGCCCTGGGCTATATGGCGGTGATCCGCATCATCGTCAGCCTGGACCCCAAGGCCGGTCCGGCCAGCGAGCGGG
TCTCGCTCAAGGAGATGATCAAGGCCCAGCTGGGCATCATTCCGGTGCTGCTGGTCTTCCTGGTGGTGATCGTCGGCATC
TATGGCGGCTGGGCCAATCCCACCGAGGCCGCCTCCATCGGCGCGGCGGCCTGCGGCATCATCGCCGTGGTGTCGGGCGG
CATGCGCTTCAAGGACCTGAAGCAGAGCGTATTCGGCACCGCCATCGCCACCGCCATGATCTTCATGGTGCTGATCGGCG
CCGATCTCCTGAACTCGGCCCTGGCGCTGACCCAGATGCCCGCCGAACTGGCCAATTGGGTGAAGAACAGCGGCATGCCG
CCGGTGGCCGTGTTGTTCACCATCATCGCCATCTATGTGCTGTTGGGCTGCGTCATGGACTCGCTGGCCATGATCCTGCT
GACCATCCCCATCTTCTATCCGGTGGTGCTGGGCCTGGATTTCTACGGCATGAGCGTCGACGACAAGTCCATCTGGTTCG
GCATCGTCGCCCTGATGGTGGTCGAGATCGGCCTGGTCCATCCGCCGGTGGGCATGAACCTCTACGTCATCAACAAGATC
GCCAAGGACGTGCCCTTGAAGGAAACCGCCATGGGGGTGCTGCCCTTCCTGGCCTCGGACTTCATCCGCATCGTGGTCCT
GGTGTTCTTCCCGCCCATGGCCCTGTGGCTGGTCCACGTCACCGGCTGA

Upstream 100 bases:

>100_bases
GGATTCCCGTGCTGCTGATGGTGCCGAGTCTGGCGCTCACCGGCATCTGCGCCATCTACCGCACCGCCCTTGAATTCACC
GTCGGACTGGAGATTCCGTC

Downstream 100 bases:

>100_bases
TCCCTGAGGAAAGCAATCATGCGTCACGCCCGCATCAACTTCCCCGGCACCGCCGCGCCCATCAGCGGAGCCGTCACCCC
CGACGGCACCGGCCTGGACC

Product: TRAP-type C4-dicarboxylate transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSGTTLGLTAFGILLLMLVVRIHIGIAMFLAATGIYLVLNHGELNSLLFTLNNLVYARLSNYDLAVIPLFILMGQFATHG
GLSKALFHAAGTLIGHFKGGLAYAATAACAAFGAICGSSLATAATMGQVALPELTRRNYSGRLATGTLAAGGTLGILIPP
SVPLVVYAVLTQESIGKLFVAAVIPGIIAALGYMAVIRIIVSLDPKAGPASERVSLKEMIKAQLGIIPVLLVFLVVIVGI
YGGWANPTEAASIGAAACGIIAVVSGGMRFKDLKQSVFGTAIATAMIFMVLIGADLLNSALALTQMPAELANWVKNSGMP
PVAVLFTIIAIYVLLGCVMDSLAMILLTIPIFYPVVLGLDFYGMSVDDKSIWFGIVALMVVEIGLVHPPVGMNLYVINKI
AKDVPLKETAMGVLPFLASDFIRIVVLVFFPPMALWLVHVTG

Sequences:

>Translated_442_residues
MSGTTLGLTAFGILLLMLVVRIHIGIAMFLAATGIYLVLNHGELNSLLFTLNNLVYARLSNYDLAVIPLFILMGQFATHG
GLSKALFHAAGTLIGHFKGGLAYAATAACAAFGAICGSSLATAATMGQVALPELTRRNYSGRLATGTLAAGGTLGILIPP
SVPLVVYAVLTQESIGKLFVAAVIPGIIAALGYMAVIRIIVSLDPKAGPASERVSLKEMIKAQLGIIPVLLVFLVVIVGI
YGGWANPTEAASIGAAACGIIAVVSGGMRFKDLKQSVFGTAIATAMIFMVLIGADLLNSALALTQMPAELANWVKNSGMP
PVAVLFTIIAIYVLLGCVMDSLAMILLTIPIFYPVVLGLDFYGMSVDDKSIWFGIVALMVVEIGLVHPPVGMNLYVINKI
AKDVPLKETAMGVLPFLASDFIRIVVLVFFPPMALWLVHVTG
>Mature_441_residues
SGTTLGLTAFGILLLMLVVRIHIGIAMFLAATGIYLVLNHGELNSLLFTLNNLVYARLSNYDLAVIPLFILMGQFATHGG
LSKALFHAAGTLIGHFKGGLAYAATAACAAFGAICGSSLATAATMGQVALPELTRRNYSGRLATGTLAAGGTLGILIPPS
VPLVVYAVLTQESIGKLFVAAVIPGIIAALGYMAVIRIIVSLDPKAGPASERVSLKEMIKAQLGIIPVLLVFLVVIVGIY
GGWANPTEAASIGAAACGIIAVVSGGMRFKDLKQSVFGTAIATAMIFMVLIGADLLNSALALTQMPAELANWVKNSGMPP
VAVLFTIIAIYVLLGCVMDSLAMILLTIPIFYPVVLGLDFYGMSVDDKSIWFGIVALMVVEIGLVHPPVGMNLYVINKIA
KDVPLKETAMGVLPFLASDFIRIVVLVFFPPMALWLVHVTG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=423, Percent_Identity=26.4775413711584, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46299; Mature: 46167

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTTLGLTAFGILLLMLVVRIHIGIAMFLAATGIYLVLNHGELNSLLFTLNNLVYARLS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHC
NYDLAVIPLFILMGQFATHGGLSKALFHAAGTLIGHFKGGLAYAATAACAAFGAICGSSL
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ATAATMGQVALPELTRRNYSGRLATGTLAAGGTLGILIPPSVPLVVYAVLTQESIGKLFV
HHHHHHCCHHHHHHHHCCCCCCEEECEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AAVIPGIIAALGYMAVIRIIVSLDPKAGPASERVSLKEMIKAQLGIIPVLLVFLVVIVGI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGGWANPTEAASIGAAACGIIAVVSGGMRFKDLKQSVFGTAIATAMIFMVLIGADLLNSA
HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALTQMPAELANWVKNSGMPPVAVLFTIIAIYVLLGCVMDSLAMILLTIPIFYPVVLGLD
HHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYGMSVDDKSIWFGIVALMVVEIGLVHPPVGMNLYVINKIAKDVPLKETAMGVLPFLASD
HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
FIRIVVLVFFPPMALWLVHVTG
HHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
SGTTLGLTAFGILLLMLVVRIHIGIAMFLAATGIYLVLNHGELNSLLFTLNNLVYARLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHC
NYDLAVIPLFILMGQFATHGGLSKALFHAAGTLIGHFKGGLAYAATAACAAFGAICGSSL
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ATAATMGQVALPELTRRNYSGRLATGTLAAGGTLGILIPPSVPLVVYAVLTQESIGKLFV
HHHHHHCCHHHHHHHHCCCCCCEEECEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
AAVIPGIIAALGYMAVIRIIVSLDPKAGPASERVSLKEMIKAQLGIIPVLLVFLVVIVGI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGGWANPTEAASIGAAACGIIAVVSGGMRFKDLKQSVFGTAIATAMIFMVLIGADLLNSA
HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALTQMPAELANWVKNSGMPPVAVLFTIIAIYVLLGCVMDSLAMILLTIPIFYPVVLGLD
HHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYGMSVDDKSIWFGIVALMVVEIGLVHPPVGMNLYVINKIAKDVPLKETAMGVLPFLASD
HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
FIRIVVLVFFPPMALWLVHVTG
HHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]