| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309872
Identifier: 83309872
GI number: 83309872
Start: 830614
End: 831414
Strand: Reverse
Name: 83309872
Synonym: amb0773
Alternate gene names: NA
Gene position: 831414-830614 (Counterclockwise)
Preceding gene: 83309873
Following gene: 83309863
Centisome position: 16.74
GC content: 67.54
Gene sequence:
>801_bases GTGACCTCCCCCGCCCTTCGCCGCATCCAGGCCGTGTGCCTGCGCCATCTGTACATCATGAAAGGCTCGTGGCCCCGCAT CCTGGAGATGGCCTACTGGCCCGCCGTCAACATGGTGATGTGGGGCTTCACCAACCGCTTCTTCGCCGAGCACTCCACCT GGGTGGCCCAGGCGGGCGGCATCCTGATCGGCGCGGTGCTGCTGTGGGACGTGATGTTCCGCGGCAATCTGGGGGTGGCC CTGTCCTTCCTGGAGGAGATGTGGTCGCGCAATCTGGGGCATCTGTCGGTCAGCCCACTGCGCCCGCACGAACTGGTCAT CTCCATGCTGACCATGAGCCTGATCCGCACGGTGGTCGGCGTGCTGCCGGCCGCCTTGCTGGCCATTCCGCTCTACCATT ATTCCATCTTCACCCTGGGCCTGCCCCTGCTCGCCTTCTGGTTCAGCCTGATGGTCAGCGGCTGGGCCATGGGGCTGGCG GTGTCGGCCCTGGTGCTGCGCTTCGGCCTGGGGGCCGAGAGTCTGGCCTGGGTGCTGATCTTCGCCATGGCGCCCCTGGC CGGCATCTATTACCCCATCAGCACCCTGCCGGAATGGCTGCAGCCAGTGGCCTGGGCGCTGCCCCCCGCCCATGTGTTCG AGGGCATGCGCGCCGTGGTGTTCGAGGGCGCCATGCGCTTCGACCTGCTGGCCTCGGCCCTGGCACTCAACGCCGTCTAC CTCGTGCTCGGCGCCGGGCTGTTCCTGTGGGCCTGGCATGGAGCAAGGGTGCGGGGCGCGCTGCTCAACGTGGGGGAATG A
Upstream 100 bases:
>100_bases AGGGCTCGCCCGCCGCGCTGATCGAACGCTTCGGCCGCGCCTCCATGGAGGAGGTCTTCCTCGACATCGCCCGTGATCGC CAGCGGCCGGAGACGGCGTC
Downstream 100 bases:
>100_bases GGCATGCGGGGCTCCCGCCCCGGCCCCGGTTGGAGGAAACCTCCAAACCTCCCTTACGTTTATGAATCAAAGGGGGTTTG GGGCATCGCCCCAAATGGGC
Product: ABC-type multidrug transport system, permease component
Products: NA
Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC Transporter Permease Protein; ABC-2 Transporter Component; ABC-2 Type Transport System Permease Protein; ABC Transporter Inner Membrane Subunit
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTSPALRRIQAVCLRHLYIMKGSWPRILEMAYWPAVNMVMWGFTNRFFAEHSTWVAQAGGILIGAVLLWDVMFRGNLGVA LSFLEEMWSRNLGHLSVSPLRPHELVISMLTMSLIRTVVGVLPAALLAIPLYHYSIFTLGLPLLAFWFSLMVSGWAMGLA VSALVLRFGLGAESLAWVLIFAMAPLAGIYYPISTLPEWLQPVAWALPPAHVFEGMRAVVFEGAMRFDLLASALALNAVY LVLGAGLFLWAWHGARVRGALLNVGE
Sequences:
>Translated_266_residues MTSPALRRIQAVCLRHLYIMKGSWPRILEMAYWPAVNMVMWGFTNRFFAEHSTWVAQAGGILIGAVLLWDVMFRGNLGVA LSFLEEMWSRNLGHLSVSPLRPHELVISMLTMSLIRTVVGVLPAALLAIPLYHYSIFTLGLPLLAFWFSLMVSGWAMGLA VSALVLRFGLGAESLAWVLIFAMAPLAGIYYPISTLPEWLQPVAWALPPAHVFEGMRAVVFEGAMRFDLLASALALNAVY LVLGAGLFLWAWHGARVRGALLNVGE >Mature_265_residues TSPALRRIQAVCLRHLYIMKGSWPRILEMAYWPAVNMVMWGFTNRFFAEHSTWVAQAGGILIGAVLLWDVMFRGNLGVAL SFLEEMWSRNLGHLSVSPLRPHELVISMLTMSLIRTVVGVLPAALLAIPLYHYSIFTLGLPLLAFWFSLMVSGWAMGLAV SALVLRFGLGAESLAWVLIFAMAPLAGIYYPISTLPEWLQPVAWALPPAHVFEGMRAVVFEGAMRFDLLASALALNAVYL VLGAGLFLWAWHGARVRGALLNVGE
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29409; Mature: 29277
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPALRRIQAVCLRHLYIMKGSWPRILEMAYWPAVNMVMWGFTNRFFAEHSTWVAQAGG CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH ILIGAVLLWDVMFRGNLGVALSFLEEMWSRNLGHLSVSPLRPHELVISMLTMSLIRTVVG HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH VLPAALLAIPLYHYSIFTLGLPLLAFWFSLMVSGWAMGLAVSALVLRFGLGAESLAWVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FAMAPLAGIYYPISTLPEWLQPVAWALPPAHVFEGMRAVVFEGAMRFDLLASALALNAVY HHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLGAGLFLWAWHGARVRGALLNVGE HHHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure TSPALRRIQAVCLRHLYIMKGSWPRILEMAYWPAVNMVMWGFTNRFFAEHSTWVAQAGG CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH ILIGAVLLWDVMFRGNLGVALSFLEEMWSRNLGHLSVSPLRPHELVISMLTMSLIRTVVG HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH VLPAALLAIPLYHYSIFTLGLPLLAFWFSLMVSGWAMGLAVSALVLRFGLGAESLAWVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FAMAPLAGIYYPISTLPEWLQPVAWALPPAHVFEGMRAVVFEGAMRFDLLASALALNAVY HHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLGAGLFLWAWHGARVRGALLNVGE HHHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA