BacMap

Definition	Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession	NC_007626
Length	4,967,148

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The map label for this gene is natA [H]

Identifier: 83309873

GI number: 83309873

Start: 831411

End: 831956

Strand: Reverse

Name: natA [H]

Synonym: amb0774

Alternate gene names: 83309873

Gene position: 831956-831411 (Counterclockwise)

Preceding gene: 83309874

Following gene: 83309872

Centisome position: 16.75

GC content: 68.13

Gene sequence:

>546_bases
ATGGTGCGGCACCGCTACCGCGTCCTGCCGCGCATGAATTTCTCCAGCCCCTATGTGGACCTGCCCCACCGCCTGACGGT
GCGCCAGAACCTCAGGGTCTATGGCGGCCTCTACGGCGTGGCCCGCCTCAAGGACCGCATCGCCGAACTCTGCGACGAGC
TGGAATTGGGCGATTTCATCGACCGCCCGGCGGGCAAGCTGTCGGCCGGGCAGAAGACCCGCGTCGCCCTGGCCAAGGCG
CTGCTCAACAAGCCCGACCTGCTGCTGCTGGACGAGCCCACCGCCTCGCTGGACCCCGACACCGCCGATTGGGTCAGAAG
CTACTTCCAGGCCTACCGCCAGCGGGCCGGCGCCACCATCGTGCTGGCGTCCCACAACATGACCGAGGTCGAGCGCATGT
GCGACCATGTGCTGATGATGAAGCAGGGCCGCATCGTCGACCAGGGCTCGCCCGCCGCGCTGATCGAACGCTTCGGCCGC
GCCTCCATGGAGGAGGTCTTCCTCGACATCGCCCGTGATCGCCAGCGGCCGGAGACGGCGTCGTGA

Upstream 100 bases:

>100_bases
TCTCCTGGGCGGCAACGGCGCGGGCAAGACCACCACGCTGTCCGTGCTGCTGGGCCTGCTGCTGCCCACGTCCGGCTCCA
TCACCGTGCTGGGCGAGGAC

Downstream 100 bases:

>100_bases
CCTCCCCCGCCCTTCGCCGCATCCAGGCCGTGTGCCTGCGCCATCTGTACATCATGAAAGGCTCGTGGCCCCGCATCCTG
GAGATGGCCTACTGGCCCGC

Product: ABC-type Na+ transport system

Products: NA

Alternate protein names: Na(+) ABC transporter [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVRHRYRVLPRMNFSSPYVDLPHRLTVRQNLRVYGGLYGVARLKDRIAELCDELELGDFIDRPAGKLSAGQKTRVALAKA
LLNKPDLLLLDEPTASLDPDTADWVRSYFQAYRQRAGATIVLASHNMTEVERMCDHVLMMKQGRIVDQGSPAALIERFGR
ASMEEVFLDIARDRQRPETAS

Sequences:

>Translated_181_residues
MVRHRYRVLPRMNFSSPYVDLPHRLTVRQNLRVYGGLYGVARLKDRIAELCDELELGDFIDRPAGKLSAGQKTRVALAKA
LLNKPDLLLLDEPTASLDPDTADWVRSYFQAYRQRAGATIVLASHNMTEVERMCDHVLMMKQGRIVDQGSPAALIERFGR
ASMEEVFLDIARDRQRPETAS
>Mature_181_residues
MVRHRYRVLPRMNFSSPYVDLPHRLTVRQNLRVYGGLYGVARLKDRIAELCDELELGDFIDRPAGKLSAGQKTRVALAKA
LLNKPDLLLLDEPTASLDPDTADWVRSYFQAYRQRAGATIVLASHNMTEVERMCDHVLMMKQGRIVDQGSPAALIERFGR
ASMEEVFLDIARDRQRPETAS

Specific function: Involved in ATP-dependent electrogenic sodium extrusion [H]

COG id: COG4555

COG function: function code CP; ABC-type Na+ transport system, ATPase component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27477115, Length=146, Percent_Identity=33.5616438356164, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI47078218, Length=145, Percent_Identity=34.4827586206897, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI45446740, Length=145, Percent_Identity=34.4827586206897, Blast_Score=82, Evalue=2e-16,
Organism=Homo sapiens, GI6005701, Length=144, Percent_Identity=32.6388888888889, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI31657092, Length=152, Percent_Identity=34.2105263157895, Blast_Score=81, Evalue=5e-16,
Organism=Homo sapiens, GI150417984, Length=158, Percent_Identity=34.1772151898734, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI27436953, Length=144, Percent_Identity=31.25, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI27881501, Length=146, Percent_Identity=31.5068493150685, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI30795238, Length=146, Percent_Identity=31.5068493150685, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI27262624, Length=147, Percent_Identity=30.6122448979592, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI27262626, Length=147, Percent_Identity=30.6122448979592, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI153792144, Length=160, Percent_Identity=30.625, Blast_Score=77, Evalue=6e-15,
Organism=Homo sapiens, GI105990541, Length=170, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI21536376, Length=161, Percent_Identity=27.9503105590062, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI10947135, Length=85, Percent_Identity=35.2941176470588, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI69354671, Length=85, Percent_Identity=35.2941176470588, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI116734710, Length=158, Percent_Identity=29.746835443038, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI48994943, Length=160, Percent_Identity=34.375, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788450, Length=165, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1786398, Length=141, Percent_Identity=35.4609929078014, Blast_Score=85, Evalue=3e-18,
Organism=Escherichia coli, GI1788506, Length=156, Percent_Identity=31.4102564102564, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787370, Length=143, Percent_Identity=34.965034965035, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI87081791, Length=177, Percent_Identity=32.2033898305085, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87081782, Length=173, Percent_Identity=28.3236994219653, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87081709, Length=145, Percent_Identity=35.1724137931034, Blast_Score=77, Evalue=5e-16,
Organism=Escherichia coli, GI1788761, Length=111, Percent_Identity=35.1351351351351, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790467, Length=145, Percent_Identity=30.3448275862069, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787089, Length=140, Percent_Identity=35.7142857142857, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1789593, Length=145, Percent_Identity=27.5862068965517, Blast_Score=73, Evalue=9e-15,
Organism=Escherichia coli, GI1788225, Length=89, Percent_Identity=40.4494382022472, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788644, Length=116, Percent_Identity=34.4827586206897, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787758, Length=92, Percent_Identity=36.9565217391304, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786319, Length=148, Percent_Identity=31.7567567567568, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787712, Length=143, Percent_Identity=33.5664335664336, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1787029, Length=150, Percent_Identity=34, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1787164, Length=79, Percent_Identity=44.3037974683544, Blast_Score=70, Evalue=7e-14,
Organism=Escherichia coli, GI1790544, Length=137, Percent_Identity=28.4671532846715, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1789672, Length=155, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788165, Length=155, Percent_Identity=30.9677419354839, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1786703, Length=99, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=1e-12,
Organism=Escherichia coli, GI1787500, Length=145, Percent_Identity=26.8965517241379, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1786253, Length=145, Percent_Identity=31.0344827586207, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789962, Length=90, Percent_Identity=34.4444444444444, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1789891, Length=103, Percent_Identity=34.9514563106796, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787105, Length=129, Percent_Identity=34.8837209302326, Blast_Score=63, Evalue=9e-12,
Organism=Escherichia coli, GI1789864, Length=107, Percent_Identity=28.9719626168224, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI87082267, Length=144, Percent_Identity=28.4722222222222, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789032, Length=86, Percent_Identity=36.046511627907, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789751, Length=83, Percent_Identity=34.9397590361446, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789873, Length=103, Percent_Identity=30.0970873786408, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1787182, Length=142, Percent_Identity=28.169014084507, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786654, Length=119, Percent_Identity=33.6134453781513, Blast_Score=61, Evalue=4e-11,
Organism=Escherichia coli, GI1787759, Length=112, Percent_Identity=29.4642857142857, Blast_Score=60, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=151, Percent_Identity=27.8145695364238, Blast_Score=87, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI115533608, Length=176, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71983516, Length=162, Percent_Identity=33.9506172839506, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71983510, Length=162, Percent_Identity=33.9506172839506, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI71983523, Length=162, Percent_Identity=33.9506172839506, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI193202349, Length=126, Percent_Identity=34.1269841269841, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17558664, Length=146, Percent_Identity=34.9315068493151, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565586, Length=159, Percent_Identity=29.559748427673, Blast_Score=69, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI133930907, Length=154, Percent_Identity=29.8701298701299, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193202878, Length=101, Percent_Identity=28.7128712871287, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193208177, Length=141, Percent_Identity=27.6595744680851, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17569145, Length=148, Percent_Identity=27.027027027027, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=148, Percent_Identity=27.027027027027, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=102, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324314, Length=107, Percent_Identity=35.5140186915888, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322956, Length=138, Percent_Identity=27.536231884058, Blast_Score=64, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322980, Length=140, Percent_Identity=30.7142857142857, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=83, Percent_Identity=39.7590361445783, Blast_Score=63, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24650855, Length=168, Percent_Identity=27.3809523809524, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24650853, Length=168, Percent_Identity=27.3809523809524, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281362751, Length=168, Percent_Identity=27.3809523809524, Blast_Score=77, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24582014, Length=174, Percent_Identity=26.4367816091954, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24582012, Length=174, Percent_Identity=26.4367816091954, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI85725262, Length=164, Percent_Identity=27.4390243902439, Blast_Score=73, Evalue=9e-14,
Organism=Drosophila melanogaster, GI221500365, Length=133, Percent_Identity=29.3233082706767, Blast_Score=71, Evalue=5e-13,
Organism=Drosophila melanogaster, GI116007184, Length=133, Percent_Identity=29.3233082706767, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24653245, Length=113, Percent_Identity=35.3982300884956, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281363262, Length=113, Percent_Identity=35.3982300884956, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641342, Length=115, Percent_Identity=32.1739130434783, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221512771, Length=160, Percent_Identity=28.125, Blast_Score=67, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24643674, Length=139, Percent_Identity=30.2158273381295, Blast_Score=67, Evalue=6e-12,
Organism=Drosophila melanogaster, GI17136592, Length=145, Percent_Identity=32.4137931034483, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI23397593, Length=136, Percent_Identity=30.8823529411765, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85726357, Length=93, Percent_Identity=34.4086021505376, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 20570; Mature: 20570

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRHRYRVLPRMNFSSPYVDLPHRLTVRQNLRVYGGLYGVARLKDRIAELCDELELGDFI
CCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DRPAGKLSAGQKTRVALAKALLNKPDLLLLDEPTASLDPDTADWVRSYFQAYRQRAGATI
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEE
VLASHNMTEVERMCDHVLMMKQGRIVDQGSPAALIERFGRASMEEVFLDIARDRQRPETA
EEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
S
C
>Mature Secondary Structure
MVRHRYRVLPRMNFSSPYVDLPHRLTVRQNLRVYGGLYGVARLKDRIAELCDELELGDFI
CCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
DRPAGKLSAGQKTRVALAKALLNKPDLLLLDEPTASLDPDTADWVRSYFQAYRQRAGATI
CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEE
VLASHNMTEVERMCDHVLMMKQGRIVDQGSPAALIERFGRASMEEVFLDIARDRQRPETA
EEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9106203; 9274031; 9384377 [H]