| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is trxB [H]
Identifier: 83309762
GI number: 83309762
Start: 714464
End: 715414
Strand: Reverse
Name: trxB [H]
Synonym: amb0663
Alternate gene names: 83309762
Gene position: 715414-714464 (Counterclockwise)
Preceding gene: 83309763
Following gene: 83309761
Centisome position: 14.4
GC content: 66.56
Gene sequence:
>951_bases ATGGCGCATCACCACTCCAAGGTCCTGATTCTGGGTTCCGGTCCGGCCGGCTGCACCGCGGCCATCTACGCGGCGCGCGC CAATCTCGAGCCCATGCTGGTGGCCGGGCTGCAGCCCGGCGGCCAGTTGACCATCACCACTGATGTGGAAAACTTCCCAG GCTTCGCCGAGGCGGTCCAGGGGCCCTGGCTGATGGAACAGATGCAGGCCCAGGCCGAGCATGTGGGCACCCGCTTCATG GACGACACCATCGTCTCGGTGGACCTGTCCAAGCGCCCCTTCACCGCCGTGGGCGATTCCGGCGACACCTATGCCGGCGA TACGCTGATCATCTGCACCGGCGCCACCGCCCGCTGGCTGGGCCTGGAATCGGAAAAGAAGTTCTCCGGCTTCGGCGTGT CGGCTTGCGCCACCTGCGACGGCTTCTTCTTCCGCGGCAAGGAAGTGGCGGTGATGGGCGGCGGCAATTCGGCGGTGGAA GAGGCCATCTATCTGGCCGGCATCGCCTCCAAGGTCACCCTGATCCATCGCCGCGACACGCTGCGGGCCGAAAAGATCGC CCAGGACCGCCTGTTCGCCAATCCCAAGGTCGCCGTGGTCTGGGACAGCGTCATCGACGAGATCGTCGGCGACGACAACC CTCCTGGCGTCACCGGGGTGCGCCTCAAGAACGTCAAGACCGGCGCGCTGTCCGTGCTGCCAGTGGACGGCGTGTTCATC GCCATCGGCCACACGCCCAACACCGAGCTGTTCAAGGGCGCCCTGGAAATGGATTCCGAGGGCTATCTGATCACCAAGGC CGGCGCCACCTCCACCAACATTCCCGGCGTGTTCGCCGCCGGCGACGTGCAGGACAAGATCTATCGCCAGGCGGTCACCG CCGCCGGCACCGGCTGCATGGCCGCGCTGGAGGCCGAGCGCTTCCTCACCGCGCATGGACACACGGGTTAA
Upstream 100 bases:
>100_bases TAAGGCTTTTGTAAGATAGGGAGGGCGCGCCGCTTGCCAGCGGCGCGCCCTCTCCTTATGCTGTGACGCAATAATTTCGA AAAGTCCGGGAAGCATCGCG
Downstream 100 bases:
>100_bases GTTGCGGCACAGTAGCCGGTATGAAATGGGAGGGCGGAAACCATAATCCGCCGCGGGGAGGAGACCGGTCGCCACATGGA CTGGGATAAGCTGAGGGTTT
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MAHHHSKVLILGSGPAGCTAAIYAARANLEPMLVAGLQPGGQLTITTDVENFPGFAEAVQGPWLMEQMQAQAEHVGTRFM DDTIVSVDLSKRPFTAVGDSGDTYAGDTLIICTGATARWLGLESEKKFSGFGVSACATCDGFFFRGKEVAVMGGGNSAVE EAIYLAGIASKVTLIHRRDTLRAEKIAQDRLFANPKVAVVWDSVIDEIVGDDNPPGVTGVRLKNVKTGALSVLPVDGVFI AIGHTPNTELFKGALEMDSEGYLITKAGATSTNIPGVFAAGDVQDKIYRQAVTAAGTGCMAALEAERFLTAHGHTG
Sequences:
>Translated_316_residues MAHHHSKVLILGSGPAGCTAAIYAARANLEPMLVAGLQPGGQLTITTDVENFPGFAEAVQGPWLMEQMQAQAEHVGTRFM DDTIVSVDLSKRPFTAVGDSGDTYAGDTLIICTGATARWLGLESEKKFSGFGVSACATCDGFFFRGKEVAVMGGGNSAVE EAIYLAGIASKVTLIHRRDTLRAEKIAQDRLFANPKVAVVWDSVIDEIVGDDNPPGVTGVRLKNVKTGALSVLPVDGVFI AIGHTPNTELFKGALEMDSEGYLITKAGATSTNIPGVFAAGDVQDKIYRQAVTAAGTGCMAALEAERFLTAHGHTG >Mature_315_residues AHHHSKVLILGSGPAGCTAAIYAARANLEPMLVAGLQPGGQLTITTDVENFPGFAEAVQGPWLMEQMQAQAEHVGTRFMD DTIVSVDLSKRPFTAVGDSGDTYAGDTLIICTGATARWLGLESEKKFSGFGVSACATCDGFFFRGKEVAVMGGGNSAVEE AIYLAGIASKVTLIHRRDTLRAEKIAQDRLFANPKVAVVWDSVIDEIVGDDNPPGVTGVRLKNVKTGALSVLPVDGVFIA IGHTPNTELFKGALEMDSEGYLITKAGATSTNIPGVFAAGDVQDKIYRQAVTAAGTGCMAALEAERFLTAHGHTG
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=313, Percent_Identity=57.1884984025559, Blast_Score=345, Evalue=3e-96, Organism=Escherichia coli, GI87081763, Length=311, Percent_Identity=36.9774919614148, Blast_Score=146, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6321898, Length=322, Percent_Identity=46.583850931677, Blast_Score=283, Evalue=3e-77, Organism=Saccharomyces cerevisiae, GI6320560, Length=317, Percent_Identity=45.7413249211356, Blast_Score=279, Evalue=4e-76,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 33129; Mature: 32998
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHHHSKVLILGSGPAGCTAAIYAARANLEPMLVAGLQPGGQLTITTDVENFPGFAEAVQ CCCCCCEEEEEECCCCCHHHEEEHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHC GPWLMEQMQAQAEHVGTRFMDDTIVSVDLSKRPFTAVGDSGDTYAGDTLIICTGATARWL CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCEEEE GLESEKKFSGFGVSACATCDGFFFRGKEVAVMGGGNSAVEEAIYLAGIASKVTLIHRRDT CCCCCCCCCCCCCHHHHCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHEEEEEECCCH LRAEKIAQDRLFANPKVAVVWDSVIDEIVGDDNPPGVTGVRLKNVKTGALSVLPVDGVFI HHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCEEE AIGHTPNTELFKGALEMDSEGYLITKAGATSTNIPGVFAAGDVQDKIYRQAVTAAGTGCM EECCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHH AALEAERFLTAHGHTG HHHHHHHEEEECCCCC >Mature Secondary Structure AHHHSKVLILGSGPAGCTAAIYAARANLEPMLVAGLQPGGQLTITTDVENFPGFAEAVQ CCCCCEEEEEECCCCCHHHEEEHHHCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHC GPWLMEQMQAQAEHVGTRFMDDTIVSVDLSKRPFTAVGDSGDTYAGDTLIICTGATARWL CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCEEEE GLESEKKFSGFGVSACATCDGFFFRGKEVAVMGGGNSAVEEAIYLAGIASKVTLIHRRDT CCCCCCCCCCCCCHHHHCCCCEEECCCEEEEEECCCHHHHHHHHHHHHHHEEEEEECCCH LRAEKIAQDRLFANPKVAVVWDSVIDEIVGDDNPPGVTGVRLKNVKTGALSVLPVDGVFI HHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCEEE AIGHTPNTELFKGALEMDSEGYLITKAGATSTNIPGVFAAGDVQDKIYRQAVTAAGTGCM EECCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHH AALEAERFLTAHGHTG HHHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA