| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309741
Identifier: 83309741
GI number: 83309741
Start: 692731
End: 694056
Strand: Reverse
Name: 83309741
Synonym: amb0642
Alternate gene names: NA
Gene position: 694056-692731 (Counterclockwise)
Preceding gene: 83309742
Following gene: 83309730
Centisome position: 13.97
GC content: 59.43
Gene sequence:
>1326_bases ATGACCAGCAATGTGATTCGCGGGCACTTCGGCGGACGCACGCAAGAGGCCCCACAGCAGGGAACGATCGAACCGATGCA GGCCCCGTCCTACGGTGACCTTCCGGCACTGGAGCGTAAGGTTGCGCCTCTGAAGGGCAGCAGGGCTGGTAACGGGCGCA AGCTCGATCTGCCCGAACGATCCCAGATCGCCCGCAACCTGGGACGCCTTTTCGACCGCCTGCCCAAAGGGGGAACTCGC AGCAACGTGCTGGAAAGGGCGGAACTCTCCGATGCGGGCGACTACACCAAGCGTCTCCCCCGCATTGCCATCCTGCCCGG CAAAAAAGGCGACGATAAAGGGCTGATCCCGCACTATGACGCCTACGTCAAAGTGGCGATCGAGGTGAAGAAGGAGCTTG GCGAGGATCCTGAGCTTGTGGAGTTTGAGCTTGTCGCCGGGACACGGCTCGATCCGCTGCTCGACACCTCGATTCCCCGG CTGACCCCGGATGAGCGGACGGTATACGACTCGCTTTCCGATCTGCATGAGATGCTGGCTCTCGCCGCCGACAGCGTGAT CCAGCAACGGGATATGCGGCGGTATTTCAGCACCCTGGCGAGGTGGCGACTGGTCAGCGGCAACGGCGGAAAGACTTTCA AGGATGAAGAGTACGCCGACGATCCAGGCGACAGCACAAGGTTCTGGGCGGCCAGGATTGATCTCATGCCGACGACTGAA ATGTTCCGCAGCCCCTGGGTTGATACGGGCGTGGTCGCCACAATGTCCGAATCTGACCATATGGTGAAATTCGAGGCCAA GCTCAACAAACAACGCATCATCAGCTTGGGCATCGCCCCCATCGGGGCTTCCGGCTCCCCGATACCGGTTCTGATCGAAA GCGATGTGTTTTCGATCATCAAGGATGATGGTTGGTGGGCCGTAGTAAACCCTGATAATACAACGCTCCGGGGCAAGAAT GACTGCCTCGTCTCATTTTTCCTCGAATCAGCCGCTGACGCGAGTGTACGCCCTCTGAGCCAGCGGCTCCTTTTCGATTT CTTCGGCTGGCAGGTCAGCAAAGTGGATGATCTATCCGACCTTTGGGACCAAAATCCCCTGATTGTCATCAATACCAACG GAGGATGCACCCGCGCGGTACCTGGGACGGTTGCGTCCTACATTGAGCGCGAACTGCGCCACCAACCGGATAATCCTTCC AGGCTTGATCGAATGCTGGATGCCGACGCCGCCGAAAAGGTTGCCTCTCTTGAGCAGTGCCTTCGCGAGGTGGAGCAGGC GCTTGACGAGGGCATGCAGCAGTTCCGCGCCGCCTGGCACCGTTAA
Upstream 100 bases:
>100_bases CCTTGTCGCCGTCACCGACACCGACACCGTGGTGACCGTCTTCTGCAGGCGGGGCCGCAAAGCCCGCCGGCACGTCAGGG GCTGATGAAGGAAAACAGAA
Downstream 100 bases:
>100_bases TGTGGTCGCCGAGAAAGCGGCTCTCCGATCTCGCCCCGCAGATCGAGGCAACCTGCCGCCAGGGGGCTTCACCGAGAGCC GACCGGCTCCTTCCGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTSNVIRGHFGGRTQEAPQQGTIEPMQAPSYGDLPALERKVAPLKGSRAGNGRKLDLPERSQIARNLGRLFDRLPKGGTR SNVLERAELSDAGDYTKRLPRIAILPGKKGDDKGLIPHYDAYVKVAIEVKKELGEDPELVEFELVAGTRLDPLLDTSIPR LTPDERTVYDSLSDLHEMLALAADSVIQQRDMRRYFSTLARWRLVSGNGGKTFKDEEYADDPGDSTRFWAARIDLMPTTE MFRSPWVDTGVVATMSESDHMVKFEAKLNKQRIISLGIAPIGASGSPIPVLIESDVFSIIKDDGWWAVVNPDNTTLRGKN DCLVSFFLESAADASVRPLSQRLLFDFFGWQVSKVDDLSDLWDQNPLIVINTNGGCTRAVPGTVASYIERELRHQPDNPS RLDRMLDADAAEKVASLEQCLREVEQALDEGMQQFRAAWHR
Sequences:
>Translated_441_residues MTSNVIRGHFGGRTQEAPQQGTIEPMQAPSYGDLPALERKVAPLKGSRAGNGRKLDLPERSQIARNLGRLFDRLPKGGTR SNVLERAELSDAGDYTKRLPRIAILPGKKGDDKGLIPHYDAYVKVAIEVKKELGEDPELVEFELVAGTRLDPLLDTSIPR LTPDERTVYDSLSDLHEMLALAADSVIQQRDMRRYFSTLARWRLVSGNGGKTFKDEEYADDPGDSTRFWAARIDLMPTTE MFRSPWVDTGVVATMSESDHMVKFEAKLNKQRIISLGIAPIGASGSPIPVLIESDVFSIIKDDGWWAVVNPDNTTLRGKN DCLVSFFLESAADASVRPLSQRLLFDFFGWQVSKVDDLSDLWDQNPLIVINTNGGCTRAVPGTVASYIERELRHQPDNPS RLDRMLDADAAEKVASLEQCLREVEQALDEGMQQFRAAWHR >Mature_440_residues TSNVIRGHFGGRTQEAPQQGTIEPMQAPSYGDLPALERKVAPLKGSRAGNGRKLDLPERSQIARNLGRLFDRLPKGGTRS NVLERAELSDAGDYTKRLPRIAILPGKKGDDKGLIPHYDAYVKVAIEVKKELGEDPELVEFELVAGTRLDPLLDTSIPRL TPDERTVYDSLSDLHEMLALAADSVIQQRDMRRYFSTLARWRLVSGNGGKTFKDEEYADDPGDSTRFWAARIDLMPTTEM FRSPWVDTGVVATMSESDHMVKFEAKLNKQRIISLGIAPIGASGSPIPVLIESDVFSIIKDDGWWAVVNPDNTTLRGKND CLVSFFLESAADASVRPLSQRLLFDFFGWQVSKVDDLSDLWDQNPLIVINTNGGCTRAVPGTVASYIERELRHQPDNPSR LDRMLDADAAEKVASLEQCLREVEQALDEGMQQFRAAWHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49178; Mature: 49047
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNVIRGHFGGRTQEAPQQGTIEPMQAPSYGDLPALERKVAPLKGSRAGNGRKLDLPER CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCH SQIARNLGRLFDRLPKGGTRSNVLERAELSDAGDYTKRLPRIAILPGKKGDDKGLIPHYD HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCC AYVKVAIEVKKELGEDPELVEFELVAGTRLDPLLDTSIPRLTPDERTVYDSLSDLHEMLA HHEEHHEEHHHHCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LAADSVIQQRDMRRYFSTLARWRLVSGNGGKTFKDEEYADDPGDSTRFWAARIDLMPTTE HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHH MFRSPWVDTGVVATMSESDHMVKFEAKLNKQRIISLGIAPIGASGSPIPVLIESDVFSII HHHCCCCCCCEEEEECCCCCEEEEHHHCCHHHEEEEECEECCCCCCCCEEEECCHHHHHE KDDGWWAVVNPDNTTLRGKNDCLVSFFLESAADASVRPLSQRLLFDFFGWQVSKVDDLSD ECCCCEEEECCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH LWDQNPLIVINTNGGCTRAVPGTVASYIERELRHQPDNPSRLDRMLDADAAEKVASLEQC HHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHH LREVEQALDEGMQQFRAAWHR HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSNVIRGHFGGRTQEAPQQGTIEPMQAPSYGDLPALERKVAPLKGSRAGNGRKLDLPER CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCH SQIARNLGRLFDRLPKGGTRSNVLERAELSDAGDYTKRLPRIAILPGKKGDDKGLIPHYD HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHCCEEEEECCCCCCCCCCCCCCC AYVKVAIEVKKELGEDPELVEFELVAGTRLDPLLDTSIPRLTPDERTVYDSLSDLHEMLA HHEEHHEEHHHHCCCCCCEEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LAADSVIQQRDMRRYFSTLARWRLVSGNGGKTFKDEEYADDPGDSTRFWAARIDLMPTTE HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHH MFRSPWVDTGVVATMSESDHMVKFEAKLNKQRIISLGIAPIGASGSPIPVLIESDVFSII HHHCCCCCCCEEEEECCCCCEEEEHHHCCHHHEEEEECEECCCCCCCCEEEECCHHHHHE KDDGWWAVVNPDNTTLRGKNDCLVSFFLESAADASVRPLSQRLLFDFFGWQVSKVDDLSD ECCCCEEEECCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH LWDQNPLIVINTNGGCTRAVPGTVASYIERELRHQPDNPSRLDRMLDADAAEKVASLEQC HHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHH LREVEQALDEGMQQFRAAWHR HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA