| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is pgm [H]
Identifier: 83309673
GI number: 83309673
Start: 621446
End: 623074
Strand: Reverse
Name: pgm [H]
Synonym: amb0574
Alternate gene names: 83309673
Gene position: 623074-621446 (Counterclockwise)
Preceding gene: 83309675
Following gene: 83309672
Centisome position: 12.54
GC content: 66.73
Gene sequence:
>1629_bases ATGGCCGCAGTGAAGACGATCCCCACCACCCCCTTTTCCGGCCAGAAGCCCGGGACCTCGGGTCTTCGCAAGAAGGTCAA GGTCTTCGCCCAGCCCCACTACCTGGAAAACTTCGTCCAGGCGGTGTTCGACTCCATTGGAGACCTGGGGGGCAAGACCC TGGTGGTGGGCGGCGACGGCCGCTATCACAACCGCACCGCCATCCAGACCATCCTGAAGATGGCTGCCGCCAGCGGCTTC GCCAAGGTGATGGTGGGCCGGGGCGGCATCCTGTCCACCCCGGCGGCGTCCTGCGTCATCCGCAAGTACAAGACCTTCGG CGGCATCATCCTGTCAGCCAGCCACAATCCCGGCGGCCCGGACGAGGATTTCGGCATCAAGTACAACATCCCGGCCGGCG GCCCGGCGCCCGAGGCCATCACCGAGGCCATCTACGCCCGCACCCAGGAAATCTCGTCCTACAAGATCATCGAAGCGGCG GATGTGGATCTGGACACCATCGGCGAGCGCGGCCTGGGCGGCATGACGGTGCAGGTCTTCGACCCCGTCGCCGATTATGC CGAGCTGATGGAAAGCCTGTTCGACTTCGGCGCCATCCGGGCGGCCTTCGCCGCCGGGTTCCGCATGAAGTTCGACGCCA TGCACGCGGTGACCGGCCCCTATGCCACCGAGATCCTGGAGAATCGCCTGGGCGCCCCCAAAGGCACCGTGATGAACGGC GTGCCGCTGGAAGATTTCGGCCACGGCCATCCCGACCCCAATCTGGTCCATGCCCATGATCTGGTGGAGGCCCTGACCGG TGCCGGCGCCCCCGATTTCGGCGCGGCCTCGGATGGCGACGGCGACCGCAACATGATTCTGGGCCGCGACTTCTATGTGA CGCCGTCGGATTCCCTGGCGGTGCTGGCCGCCAATGCCACCCTGTGTCCCGGCTATGCCCGGGGCCTGAAAGGCATCGCC CGGTCCATGCCCACCAGCGCCGCGCCCGACCGGGTGGCGGCCAAGCTGGGCATTCCCGCCTGGGAGACTCCCACCGGCTG GAAATTCTTCGGTACCCTGCTGGACGCGGGCAAGGCCACCTTCTGCGGCGAGGAAAGCTTCGGCACCGGCTCGGACCATG TGCGCGAGAAGGACGGGCTGTGGGCGGTGCTGGCCTGGCTGAACGTGCTGGCCGTGCGCAAGCAAAGCGTCGCCGACATC GTTACCGCCCATTGGCGGGAATACGGCCGCAACGTCTATTCCCGCCATGATTACGAGGGCATCGATTCCGCCGCCGCCGA AGGGCTGATGGAGCATCTGCGCGGCCTGTCCCTGAAGGGCGAGCGGCTCGGGACCTACACCGTCGCCTTCAACGACGACT TCGCCTATACCGACCCCGTTGACGGCTCTGTCTCGAAGAAGCAGGGCATCCGCGTGGTATTCGAGGACGGCTCCCGCGTG GTCTTCCGCCTGTCGGGCACCGGCACCGAGGGCGCCACGCTGCGCGTCTACATCGAGCGCTTTGAACCCGACGCCACCAA GCACCATCTGGACCCCCAGGTGGCCCTGGCCGACCTCATCACAATCGCCCGCGACCTGGCCCAGATCGAGGCCCGGACCG GACGGACCGAACCGACGGTGATTACCTGA
Upstream 100 bases:
>100_bases CTTATCTCGTAAAATTTGCCGCCTTTCCTGCGCCATTGACACCTGCCCCGCCATCGGCCATCAACGCCGAAGCAGTTTTG TCGGAAGGGAGCCCCGCGCC
Downstream 100 bases:
>100_bases CATGACCCACATCTTCCACCCCACCATCCTGCGCGAATACGACATCCGCGGCATTATCGGCGAGACGCTGTTCGCCGCCG ACGCCGAGGCCATCGGCCGG
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MAAVKTIPTTPFSGQKPGTSGLRKKVKVFAQPHYLENFVQAVFDSIGDLGGKTLVVGGDGRYHNRTAIQTILKMAAASGF AKVMVGRGGILSTPAASCVIRKYKTFGGIILSASHNPGGPDEDFGIKYNIPAGGPAPEAITEAIYARTQEISSYKIIEAA DVDLDTIGERGLGGMTVQVFDPVADYAELMESLFDFGAIRAAFAAGFRMKFDAMHAVTGPYATEILENRLGAPKGTVMNG VPLEDFGHGHPDPNLVHAHDLVEALTGAGAPDFGAASDGDGDRNMILGRDFYVTPSDSLAVLAANATLCPGYARGLKGIA RSMPTSAAPDRVAAKLGIPAWETPTGWKFFGTLLDAGKATFCGEESFGTGSDHVREKDGLWAVLAWLNVLAVRKQSVADI VTAHWREYGRNVYSRHDYEGIDSAAAEGLMEHLRGLSLKGERLGTYTVAFNDDFAYTDPVDGSVSKKQGIRVVFEDGSRV VFRLSGTGTEGATLRVYIERFEPDATKHHLDPQVALADLITIARDLAQIEARTGRTEPTVIT
Sequences:
>Translated_542_residues MAAVKTIPTTPFSGQKPGTSGLRKKVKVFAQPHYLENFVQAVFDSIGDLGGKTLVVGGDGRYHNRTAIQTILKMAAASGF AKVMVGRGGILSTPAASCVIRKYKTFGGIILSASHNPGGPDEDFGIKYNIPAGGPAPEAITEAIYARTQEISSYKIIEAA DVDLDTIGERGLGGMTVQVFDPVADYAELMESLFDFGAIRAAFAAGFRMKFDAMHAVTGPYATEILENRLGAPKGTVMNG VPLEDFGHGHPDPNLVHAHDLVEALTGAGAPDFGAASDGDGDRNMILGRDFYVTPSDSLAVLAANATLCPGYARGLKGIA RSMPTSAAPDRVAAKLGIPAWETPTGWKFFGTLLDAGKATFCGEESFGTGSDHVREKDGLWAVLAWLNVLAVRKQSVADI VTAHWREYGRNVYSRHDYEGIDSAAAEGLMEHLRGLSLKGERLGTYTVAFNDDFAYTDPVDGSVSKKQGIRVVFEDGSRV VFRLSGTGTEGATLRVYIERFEPDATKHHLDPQVALADLITIARDLAQIEARTGRTEPTVIT >Mature_541_residues AAVKTIPTTPFSGQKPGTSGLRKKVKVFAQPHYLENFVQAVFDSIGDLGGKTLVVGGDGRYHNRTAIQTILKMAAASGFA KVMVGRGGILSTPAASCVIRKYKTFGGIILSASHNPGGPDEDFGIKYNIPAGGPAPEAITEAIYARTQEISSYKIIEAAD VDLDTIGERGLGGMTVQVFDPVADYAELMESLFDFGAIRAAFAAGFRMKFDAMHAVTGPYATEILENRLGAPKGTVMNGV PLEDFGHGHPDPNLVHAHDLVEALTGAGAPDFGAASDGDGDRNMILGRDFYVTPSDSLAVLAANATLCPGYARGLKGIAR SMPTSAAPDRVAAKLGIPAWETPTGWKFFGTLLDAGKATFCGEESFGTGSDHVREKDGLWAVLAWLNVLAVRKQSVADIV TAHWREYGRNVYSRHDYEGIDSAAAEGLMEHLRGLSLKGERLGTYTVAFNDDFAYTDPVDGSVSKKQGIRVVFEDGSRVV FRLSGTGTEGATLRVYIERFEPDATKHHLDPQVALADLITIARDLAQIEARTGRTEPTVIT
Specific function: This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=558, Percent_Identity=55.5555555555556, Blast_Score=618, Evalue=1e-177, Organism=Homo sapiens, GI21361621, Length=563, Percent_Identity=53.8188277087034, Blast_Score=608, Evalue=1e-174, Organism=Homo sapiens, GI133922562, Length=561, Percent_Identity=49.3761140819964, Blast_Score=550, Evalue=1e-156, Organism=Homo sapiens, GI290463104, Length=366, Percent_Identity=56.2841530054645, Blast_Score=420, Evalue=1e-117, Organism=Homo sapiens, GI239743670, Length=132, Percent_Identity=44.6969696969697, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI239741729, Length=132, Percent_Identity=46.2121212121212, Blast_Score=114, Evalue=2e-25, Organism=Escherichia coli, GI1786904, Length=508, Percent_Identity=26.7716535433071, Blast_Score=89, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17535441, Length=571, Percent_Identity=52.0140105078809, Blast_Score=551, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6322722, Length=568, Percent_Identity=45.2464788732394, Blast_Score=476, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6323752, Length=570, Percent_Identity=44.9122807017544, Blast_Score=474, Evalue=1e-134, Organism=Drosophila melanogaster, GI17864244, Length=560, Percent_Identity=50.3571428571429, Blast_Score=548, Evalue=1e-156,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 57829; Mature: 57698
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVKTIPTTPFSGQKPGTSGLRKKVKVFAQPHYLENFVQAVFDSIGDLGGKTLVVGGDG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCC RYHNRTAIQTILKMAAASGFAKVMVGRGGILSTPAASCVIRKYKTFGGIILSASHNPGGP CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCC DEDFGIKYNIPAGGPAPEAITEAIYARTQEISSYKIIEAADVDLDTIGERGLGGMTVQVF CCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCCCEEEEEE DPVADYAELMESLFDFGAIRAAFAAGFRMKFDAMHAVTGPYATEILENRLGAPKGTVMNG CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCHHHHHHHHHHCCCCCCCEECC VPLEDFGHGHPDPNLVHAHDLVEALTGAGAPDFGAASDGDGDRNMILGRDFYVTPSDSLA CCHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCEE VLAANATLCPGYARGLKGIARSMPTSAAPDRVAAKLGIPAWETPTGWKFFGTLLDAGKAT EEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCE FCGEESFGTGSDHVREKDGLWAVLAWLNVLAVRKQSVADIVTAHWREYGRNVYSRHDYEG ECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC IDSAAAEGLMEHLRGLSLKGERLGTYTVAFNDDFAYTDPVDGSVSKKQGIRVVFEDGSRV HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEE VFRLSGTGTEGATLRVYIERFEPDATKHHLDPQVALADLITIARDLAQIEARTGRTEPTV EEEEECCCCCCCEEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IT EC >Mature Secondary Structure AAVKTIPTTPFSGQKPGTSGLRKKVKVFAQPHYLENFVQAVFDSIGDLGGKTLVVGGDG CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCC RYHNRTAIQTILKMAAASGFAKVMVGRGGILSTPAASCVIRKYKTFGGIILSASHNPGGP CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCC DEDFGIKYNIPAGGPAPEAITEAIYARTQEISSYKIIEAADVDLDTIGERGLGGMTVQVF CCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCCCEEEEEE DPVADYAELMESLFDFGAIRAAFAAGFRMKFDAMHAVTGPYATEILENRLGAPKGTVMNG CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCHHHHHHHHHHCCCCCCCEECC VPLEDFGHGHPDPNLVHAHDLVEALTGAGAPDFGAASDGDGDRNMILGRDFYVTPSDSLA CCHHHCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCEEEECCCCCEE VLAANATLCPGYARGLKGIARSMPTSAAPDRVAAKLGIPAWETPTGWKFFGTLLDAGKAT EEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCE FCGEESFGTGSDHVREKDGLWAVLAWLNVLAVRKQSVADIVTAHWREYGRNVYSRHDYEG ECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC IDSAAAEGLMEHLRGLSLKGERLGTYTVAFNDDFAYTDPVDGSVSKKQGIRVVFEDGSRV HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEE VFRLSGTGTEGATLRVYIERFEPDATKHHLDPQVALADLITIARDLAQIEARTGRTEPTV EEEEECCCCCCCEEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IT EC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7959036; 2307661 [H]