| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83309665
Identifier: 83309665
GI number: 83309665
Start: 613377
End: 613934
Strand: Reverse
Name: 83309665
Synonym: amb0566
Alternate gene names: NA
Gene position: 613934-613377 (Counterclockwise)
Preceding gene: 83309666
Following gene: 83309661
Centisome position: 12.36
GC content: 68.64
Gene sequence:
>558_bases GTGTCATCCATTAGCAGGGGCGCCCCAGGACTCATGGTCAGCGAATTGCTACGTCCCGATTCCGAGTTCTCTCGTGCTGT GTACAAGGAAATCCGCCCGGCCATTCCGCGCGCTCAGTGGCCGATGGACGCCCTGCGCGCCACCTTCACGCCCAGCAGCG ACGGCCTGGCGCTGATCGCCAGCTTCGAGGGGCTGCCGCCCGCCTATGCCGCCGTGGCGGCCCACGCGGTGCTGCGCGCC AAGGTGGACATGGTGCTGGTCTCGCCGGTGGCGGCCCTGGCTTCGGCGGTGGTCTACATGCGCCGCTGGCGCGACACCTT CCTCTATGCCCTGCTGCCGTGCCTGTTCGCCATTCCCCTGATGGCGCCCCTGGGGGATGGAGCCATGCGGGCCAGTATCG TGCTGTTCGCCATGAACTCGGCGGCCCTGCTGGTCACCCATGCCAGGCTGCTGCAGCGGCGCGCCAAGCTGCAGCAGGGG CGCTTCATCGCCGAGATCCCCACCCCCGGCCTGCGCATCAAGGTCCCCCAGGGAACCCCGCTTCATCCCCAGAGCTGA
Upstream 100 bases:
>100_bases GTAACGGTGACCTTCCCACCGCGCCGCATCTTTGCCGTGACCGCGACCGGGCGCTGACCCCAAGCCCCTGGCTCCGCCGG CCCGGTCGTGGCACAGTGCC
Downstream 100 bases:
>100_bases CGGGCGATCAGGGATTGGCGGAGGGTTTTCCCGCGCGCGCCTTCACTTCGCCCCAGATTTTCTCGTGCCGGCGCTGGGTG ACATCGCCGCAGGAGGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSSISRGAPGLMVSELLRPDSEFSRAVYKEIRPAIPRAQWPMDALRATFTPSSDGLALIASFEGLPPAYAAVAAHAVLRA KVDMVLVSPVAALASAVVYMRRWRDTFLYALLPCLFAIPLMAPLGDGAMRASIVLFAMNSAALLVTHARLLQRRAKLQQG RFIAEIPTPGLRIKVPQGTPLHPQS
Sequences:
>Translated_185_residues MSSISRGAPGLMVSELLRPDSEFSRAVYKEIRPAIPRAQWPMDALRATFTPSSDGLALIASFEGLPPAYAAVAAHAVLRA KVDMVLVSPVAALASAVVYMRRWRDTFLYALLPCLFAIPLMAPLGDGAMRASIVLFAMNSAALLVTHARLLQRRAKLQQG RFIAEIPTPGLRIKVPQGTPLHPQS >Mature_184_residues SSISRGAPGLMVSELLRPDSEFSRAVYKEIRPAIPRAQWPMDALRATFTPSSDGLALIASFEGLPPAYAAVAAHAVLRAK VDMVLVSPVAALASAVVYMRRWRDTFLYALLPCLFAIPLMAPLGDGAMRASIVLFAMNSAALLVTHARLLQRRAKLQQGR FIAEIPTPGLRIKVPQGTPLHPQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20014; Mature: 19883
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSISRGAPGLMVSELLRPDSEFSRAVYKEIRPAIPRAQWPMDALRATFTPSSDGLALIA CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEE SFEGLPPAYAAVAAHAVLRAKVDMVLVSPVAALASAVVYMRRWRDTFLYALLPCLFAIPL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAPLGDGAMRASIVLFAMNSAALLVTHARLLQRRAKLQQGRFIAEIPTPGLRIKVPQGTP HHCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCC LHPQS CCCCC >Mature Secondary Structure SSISRGAPGLMVSELLRPDSEFSRAVYKEIRPAIPRAQWPMDALRATFTPSSDGLALIA CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEE SFEGLPPAYAAVAAHAVLRAKVDMVLVSPVAALASAVVYMRRWRDTFLYALLPCLFAIPL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAPLGDGAMRASIVLFAMNSAALLVTHARLLQRRAKLQQGRFIAEIPTPGLRIKVPQGTP HHCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEECCCCCC LHPQS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA