| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is phhB
Identifier: 83309661
GI number: 83309661
Start: 609076
End: 609474
Strand: Reverse
Name: phhB
Synonym: amb0563
Alternate gene names: NA
Gene position: 609474-609076 (Counterclockwise)
Preceding gene: 83309665
Following gene: 83309658
Centisome position: 12.27
GC content: 62.41
Gene sequence:
>399_bases ATGACTTTACTCATGGTGAGAATCTACCCTGTCCTTGCGGCCGGCACCAGGGGTCCCCACTCTTTCGATAGCACCCGGCA AGGAGATGGCAAGATGATCGCAAGATTGAGCGGAAGCGAGCGGACCAGCGCCTTGGCGGGGCTGGCGGGCTGGACCGAGG TCGAGGGGCGCGACGCCATTTCGCGGTCGCTGCGCTTCGCCGATTTCAGCGAGGCCTTCGCCTTCATGACCCGGATCGCC ATGGCGGCCGAGCGGATGAATCATCATCCCGAGTGGTTCAATGTGTGGAATCGGGTCGACATCACCCTGTCCACCCATGA TGTGGGTGGCGTGACGCAAAAGGACATCTCCCTGGCCCGCGCCATCGACGCTGCGGCCAGTCACGCAAGCCGGACTTAA
Upstream 100 bases:
>100_bases GTCGGCGGCAAAGCGGCGCAGTTCCTCGGGGATATCGGCGAACGCCGCCTGGGCGATGGTCTCCAGGTCGGCCAGGGTGG GGGGCGTGCTGTGGTGGGGC
Downstream 100 bases:
>100_bases GCCCTGCCTAGACCGAGATGTCTAAAACCTGACCGACCGCCCCGCTTTTCACGGCGGAATCGGCCACGGCAGCGGCCTGC TGCGCCGACTGCCCGCCCTG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTLLMVRIYPVLAAGTRGPHSFDSTRQGDGKMIARLSGSERTSALAGLAGWTEVEGRDAISRSLRFADFSEAFAFMTRIA MAAERMNHHPEWFNVWNRVDITLSTHDVGGVTQKDISLARAIDAAASHASRT
Sequences:
>Translated_132_residues MTLLMVRIYPVLAAGTRGPHSFDSTRQGDGKMIARLSGSERTSALAGLAGWTEVEGRDAISRSLRFADFSEAFAFMTRIA MAAERMNHHPEWFNVWNRVDITLSTHDVGGVTQKDISLARAIDAAASHASRT >Mature_131_residues TLLMVRIYPVLAAGTRGPHSFDSTRQGDGKMIARLSGSERTSALAGLAGWTEVEGRDAISRSLRFADFSEAFAFMTRIAM AAERMNHHPEWFNVWNRVDITLSTHDVGGVTQKDISLARAIDAAASHASRT
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI134133240, Length=95, Percent_Identity=52.6315789473684, Blast_Score=117, Evalue=2e-27, Organism=Homo sapiens, GI4557831, Length=94, Percent_Identity=54.2553191489362, Blast_Score=116, Evalue=6e-27, Organism=Caenorhabditis elegans, GI115533705, Length=96, Percent_Identity=58.3333333333333, Blast_Score=127, Evalue=2e-30, Organism=Drosophila melanogaster, GI45549100, Length=99, Percent_Identity=53.5353535353535, Blast_Score=122, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 14450; Mature: 14318
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLMVRIYPVLAAGTRGPHSFDSTRQGDGKMIARLSGSERTSALAGLAGWTEVEGRDAI CEEEEEEHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCHHHH SRSLRFADFSEAFAFMTRIAMAAERMNHHPEWFNVWNRVDITLSTHDVGGVTQKDISLAR HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCCCCCCCHHHHHHHH AIDAAASHASRT HHHHHHHCCCCC >Mature Secondary Structure TLLMVRIYPVLAAGTRGPHSFDSTRQGDGKMIARLSGSERTSALAGLAGWTEVEGRDAI EEEEEEHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCHHHH SRSLRFADFSEAFAFMTRIAMAAERMNHHPEWFNVWNRVDITLSTHDVGGVTQKDISLAR HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEECCCCCCCCHHHHHHHH AIDAAASHASRT HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA