Click here to switch to the map view.

The map label for this gene is petP [H]

Identifier: 83309649

GI number: 83309649

Start: 596442

End: 596948

Strand: Reverse

Name: petP [H]

Synonym: amb0550

Alternate gene names: 83309649

Gene position: 596948-596442 (Counterclockwise)

Preceding gene: 83309652

Following gene: 83309648

Centisome position: 12.02

GC content: 67.06

Gene sequence:

>507_bases
ATGAGCGACATCAAGACCGGCATAAACCCGCTGTTCCTGCGCGAGGAGGAACTGCGCCAGGGGATCGAGCTGCTGTTCTT
CGCCTATCGCGATTTCACGGCCGAGCCCGACGCCATTCTGGGCGAGTACGGCTTCGGCCGCGCCCATCACCGCGTCATCT
ATTTCGTCGGCCGCCACCCCGGCATCACGGTTAGCGACCTGCTTGAAATCCTGCGCATTACCAAGCAGAGCCTCTCGAGA
GTACTGGGGCAGTTGGTGGAGGAGAAGTTCATCGTCCAGCGCCCCGGCGTACGCGACCGCCGCCAGCGCCTGCTGGAACT
GACCGAGAAAGGGATAGAACTGGAGCGGCTGCTGACAGAGCGCCAGCGGGCTCGTATCGCCCGCGCCTACCGCGAAGCCG
GCGCCGAGGCGGTGGAGGGCTTCCGCAAGGTGATGCTGGGCCTGGTGGACGAGGCCGACCGCGGCCGCTTCCCCGCCCGC
GCCGCCGGACTGCGCCGGGGAGCCTGA

Upstream 100 bases:

>100_bases
AAGGTAAGGGCGGGGCGGGAGGTTGGAAAATTACCAATCTCTCTTGCATGACGTAACATTTATAGGCCATATATGTCAAC
ATGACTGACGTAACCACGCC

Downstream 100 bases:

>100_bases
CCCCATGGACGACGCCCATATCCTGGTAGTGGACGATGACCGGCGGCTGCGCGAATTGCTGCGCAAATACCTGTCCGACA
ACGGCTATCTGGTGGCCACC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSDIKTGINPLFLREEELRQGIELLFFAYRDFTAEPDAILGEYGFGRAHHRVIYFVGRHPGITVSDLLEILRITKQSLSR
VLGQLVEEKFIVQRPGVRDRRQRLLELTEKGIELERLLTERQRARIARAYREAGAEAVEGFRKVMLGLVDEADRGRFPAR
AAGLRRGA

Sequences:

>Translated_168_residues
MSDIKTGINPLFLREEELRQGIELLFFAYRDFTAEPDAILGEYGFGRAHHRVIYFVGRHPGITVSDLLEILRITKQSLSR
VLGQLVEEKFIVQRPGVRDRRQRLLELTEKGIELERLLTERQRARIARAYREAGAEAVEGFRKVMLGLVDEADRGRFPAR
AAGLRRGA
>Mature_167_residues
SDIKTGINPLFLREEELRQGIELLFFAYRDFTAEPDAILGEYGFGRAHHRVIYFVGRHPGITVSDLLEILRITKQSLSRV
LGQLVEEKFIVQRPGVRDRRQRLLELTEKGIELERLLTERQRARIARAYREAGAEAVEGFRKVMLGLVDEADRGRFPARA
AGLRRGA

Specific function: Necessary for photosynthetic and respiratory growth [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19260; Mature: 19128

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIKTGINPLFLREEELRQGIELLFFAYRDFTAEPDAILGEYGFGRAHHRVIYFVGRHP
CCCCHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHEEEEEECCCC
GITVSDLLEILRITKQSLSRVLGQLVEEKFIVQRPGVRDRRQRLLELTEKGIELERLLTE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH
RQRARIARAYREAGAEAVEGFRKVMLGLVDEADRGRFPARAAGLRRGA
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
SDIKTGINPLFLREEELRQGIELLFFAYRDFTAEPDAILGEYGFGRAHHRVIYFVGRHP
CCCHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHEEEEEECCCC
GITVSDLLEILRITKQSLSRVLGQLVEEKFIVQRPGVRDRRQRLLELTEKGIELERLLTE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHH
RQRARIARAYREAGAEAVEGFRKVMLGLVDEADRGRFPARAAGLRRGA
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]