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The map label for this gene is nrtC [H]

Identifier: 83309633

GI number: 83309633

Start: 578556

End: 579779

Strand: Reverse

Name: nrtC [H]

Synonym: amb0534

Alternate gene names: 83309633

Gene position: 579779-578556 (Counterclockwise)

Preceding gene: 83309634

Following gene: 83309632

Centisome position: 11.67

GC content: 69.93

Gene sequence:

>1224_bases
ATGAGCGTGGAAAAGACCCGTCTGAAGCTCGGTATCGTGCCGCTGATCGACGCGGCCCCGCTGGTGGTGGCCAAGGAGCG
CGGCTTCTTCGCCGAGATGGGCCTGGACGTCGAGCTGTCCCGCGAGGCGTCCTGGGCCTCCATCCGCGACAAGGTGGCGG
TGGGCGCGCTGGACGGCGCCCAGATGCTGGCCCCCATGCCGCTGGCCATGAGCCTGGGCCTGTCGCCCATCCGGGTGCCC
ATGGCGGTGGGCATGGCGCTGAACCTGGGCGGCAACACCATCACCATCGGGAATGCCCTGTGGGAGCGCATGGAGGCCGC
CGATCCCCAATCCATGGCGGCCCGGCCGGTCTCGGCCCGTGCCCTGAAACGCGTCATCGAGGCCGACCGGGCCGTGGGCA
AGCCGCCCATGACCTTCGCCACCGTCTACCCCTACTCCCCCCACGCCGCCGAGCTGCGCCTGTGGATGGAAGCCGCCGGC
ATCGACACCCAGGCCGAGGTGCGTTTCACCGTGGTGCCGCCGCCCCAGATGATCTCGTTCCTGTCGGCGGGCAACATTGA
CGGATACTGCGTCGGCGAGCCCTGGGGCAGCCTGGCGGTGCGGATGAATCTCGGCCGCATCGCGGCGACCAGCGGCGACA
TCTTCGCCGGCCGGCTGGAAAAGGTCTTCGCGGTTACCCAGACTTGGGCCGAGACCCATCCCGAGACCCATCTGGCCGTG
CTGCAGGCGCTGATCAGCGCCGCCCGCTGGTGCGACGACAATCGCTGCGAACTGGCCGAGCTGCTGGCCCAGCCGCAATA
CGTCAATGCCCCCGTGGACGCCCTGCTGGCGCCGCTGCTGGGCGAGCACGGCCTGCCCAAGACCCTGCTGACCTTCCACG
CCCAGGCCGCCAACTTCCCGTGGCGCTCCCAGGCCATGTGGTACCTGGAAATGATGAAGCGCTGGGACATGGCGCCCTTC
GCCCTGGACTCCCGCGCCGCCGCCGAAGCCGTGTTCCGCCCCGACCTCTACCGGGTGGCCGCCCTGGCGCTGGGGCTTCG
GGTGCCGCTCACCGATTACAAGACCGAGGGCGGCCACGCCGCCCCCTGGAACCTCTTGAAGGCCACGAGGCCCATCGAGA
TGGGGCCCGACCTGCTGCTGGGCGGCGGGACCTTCGACCCCTTCGCATCCCGCGCCACCGCCATGCCCCCGACGGCAAAG
ACCGAATCAGGAGACCTCACATGA

Upstream 100 bases:

>100_bases
GGAACAAAGGCGTTCCACGGAATTCGGCGCTGCCCCCCAATGGGCCGGCGCCGGGCTTTCCGCGGAACGCCTTTTTTGTT
TTGGCCGAGGGATGAAAGAG

Downstream 100 bases:

>100_bases
ACGCTCTTCCCCGTCAGAAGCTGGTCGTCATCGGCAACGGCATGGCCGGCATGCGCACCGTCGAGGAGCTGCTGGCCATC
GCGCCGGCCCGTTACGACAT

Product: ABC-type nitrate/sulfonate/bicarbonate transport systems

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSVEKTRLKLGIVPLIDAAPLVVAKERGFFAEMGLDVELSREASWASIRDKVAVGALDGAQMLAPMPLAMSLGLSPIRVP
MAVGMALNLGGNTITIGNALWERMEAADPQSMAARPVSARALKRVIEADRAVGKPPMTFATVYPYSPHAAELRLWMEAAG
IDTQAEVRFTVVPPPQMISFLSAGNIDGYCVGEPWGSLAVRMNLGRIAATSGDIFAGRLEKVFAVTQTWAETHPETHLAV
LQALISAARWCDDNRCELAELLAQPQYVNAPVDALLAPLLGEHGLPKTLLTFHAQAANFPWRSQAMWYLEMMKRWDMAPF
ALDSRAAAEAVFRPDLYRVAALALGLRVPLTDYKTEGGHAAPWNLLKATRPIEMGPDLLLGGGTFDPFASRATAMPPTAK
TESGDLT

Sequences:

>Translated_407_residues
MSVEKTRLKLGIVPLIDAAPLVVAKERGFFAEMGLDVELSREASWASIRDKVAVGALDGAQMLAPMPLAMSLGLSPIRVP
MAVGMALNLGGNTITIGNALWERMEAADPQSMAARPVSARALKRVIEADRAVGKPPMTFATVYPYSPHAAELRLWMEAAG
IDTQAEVRFTVVPPPQMISFLSAGNIDGYCVGEPWGSLAVRMNLGRIAATSGDIFAGRLEKVFAVTQTWAETHPETHLAV
LQALISAARWCDDNRCELAELLAQPQYVNAPVDALLAPLLGEHGLPKTLLTFHAQAANFPWRSQAMWYLEMMKRWDMAPF
ALDSRAAAEAVFRPDLYRVAALALGLRVPLTDYKTEGGHAAPWNLLKATRPIEMGPDLLLGGGTFDPFASRATAMPPTAK
TESGDLT
>Mature_406_residues
SVEKTRLKLGIVPLIDAAPLVVAKERGFFAEMGLDVELSREASWASIRDKVAVGALDGAQMLAPMPLAMSLGLSPIRVPM
AVGMALNLGGNTITIGNALWERMEAADPQSMAARPVSARALKRVIEADRAVGKPPMTFATVYPYSPHAAELRLWMEAAGI
DTQAEVRFTVVPPPQMISFLSAGNIDGYCVGEPWGSLAVRMNLGRIAATSGDIFAGRLEKVFAVTQTWAETHPETHLAVL
QALISAARWCDDNRCELAELLAQPQYVNAPVDALLAPLLGEHGLPKTLLTFHAQAANFPWRSQAMWYLEMMKRWDMAPFA
LDSRAAAEAVFRPDLYRVAALALGLRVPLTDYKTEGGHAAPWNLLKATRPIEMGPDLLLGGGTFDPFASRATAMPPTAKT
ESGDLT

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 43954; Mature: 43823

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEKTRLKLGIVPLIDAAPLVVAKERGFFAEMGLDVELSREASWASIRDKVAVGALDGA
CCCCCCEEEEEEEECCCCCCEEEEECCCCHHHCCCCEEECCCCCHHHHHHHHEEECCCCH
QMLAPMPLAMSLGLSPIRVPMAVGMALNLGGNTITIGNALWERMEAADPQSMAARPVSAR
HHHCCCCHHHHCCCCCHHHHHHHCEEEECCCCEEEECHHHHHHHHCCCCHHHHCCCHHHH
ALKRVIEADRAVGKPPMTFATVYPYSPHAAELRLWMEAAGIDTQAEVRFTVVPPPQMISF
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHEEEHHHCCCCCCCEEEEEECCCHHHHHH
LSAGNIDGYCVGEPWGSLAVRMNLGRIAATSGDIFAGRLEKVFAVTQTWAETHPETHLAV
HHCCCCCCEEECCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
LQALISAARWCDDNRCELAELLAQPQYVNAPVDALLAPLLGEHGLPKTLLTFHAQAANFP
HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
WRSQAMWYLEMMKRWDMAPFALDSRAAAEAVFRPDLYRVAALALGLRVPLTDYKTEGGHA
CHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
APWNLLKATRPIEMGPDLLLGGGTFDPFASRATAMPPTAKTESGDLT
CCHHHHHCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVEKTRLKLGIVPLIDAAPLVVAKERGFFAEMGLDVELSREASWASIRDKVAVGALDGA
CCCCCEEEEEEEECCCCCCEEEEECCCCHHHCCCCEEECCCCCHHHHHHHHEEECCCCH
QMLAPMPLAMSLGLSPIRVPMAVGMALNLGGNTITIGNALWERMEAADPQSMAARPVSAR
HHHCCCCHHHHCCCCCHHHHHHHCEEEECCCCEEEECHHHHHHHHCCCCHHHHCCCHHHH
ALKRVIEADRAVGKPPMTFATVYPYSPHAAELRLWMEAAGIDTQAEVRFTVVPPPQMISF
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHEEEHHHCCCCCCCEEEEEECCCHHHHHH
LSAGNIDGYCVGEPWGSLAVRMNLGRIAATSGDIFAGRLEKVFAVTQTWAETHPETHLAV
HHCCCCCCEEECCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
LQALISAARWCDDNRCELAELLAQPQYVNAPVDALLAPLLGEHGLPKTLLTFHAQAANFP
HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCC
WRSQAMWYLEMMKRWDMAPFALDSRAAAEAVFRPDLYRVAALALGLRVPLTDYKTEGGHA
CHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCC
APWNLLKATRPIEMGPDLLLGGGTFDPFASRATAMPPTAKTESGDLT
CCHHHHHCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]