Click here to switch to the map view.

The map label for this gene is flhF [H]

Identifier: 83309596

GI number: 83309596

Start: 530435

End: 531436

Strand: Reverse

Name: flhF [H]

Synonym: amb0497

Alternate gene names: 83309596

Gene position: 531436-530435 (Counterclockwise)

Preceding gene: 83309597

Following gene: 83309595

Centisome position: 10.7

GC content: 69.76

Gene sequence:

>1002_bases
ATGAGGCTTAAATCCTTCACCGCCCCCACCATGGCCGAGGCCATGGAACTGGTCCGCCAGGAACTGGGCGACGACGCCAT
CATCGTCTCGACCCAGCGCGCCGCCGGGTCCAAGGGGGTGCGCATCACCGCCGCCCTGGAATCCGTCGATGCCGATCTGG
CCGTGGCCTCCATGCTGGAGGAAGCCACCGGCGGGTCCGAGGTGTCCGAGGCGGTGCGCAAGGCCCTGGTCGACCACGGC
GTGCCGTCCAAGCTGGTGGAGCGGCTGGTCAATGCCGCCCATACCTCCGGTCTTTCCCAGCCGCCGCTGGCCTGCGCCGC
CGCCCTGGAAGCCGGCTTCACCTTCGCCCACCTGCCCGAGCACGGGGCGCCGCGCCCCTTCATGCTGGTGGGACCCAACG
GCTCGGGCAAGTCCATCGCCGCCGCCAAGCTGGCGGCGCGCTCGGTGCTGAAGCAGCGGCAGGTGGGCGTCATCACCTGC
GACAACATCCGCGCCGGCGCCGTCGAGCAACTGGCCGCCTTCACCTCCATCCTGGAGATCGACCTGGTTCGCGCCAGGGG
ACCGGAATCCCTGGCCCGGGTGGTGGAAAGCGTGAACGGCGCCTTCGATCTGGTGGTGATCGATTCGCCCGGCCTCAACC
CGTTCAAGCAGAGCGACATGGACTATCTCCAGGCCCTGATCGAGGCCGCCGACGTGGAGCCCGTCCTGGTGATGGCCGCC
GGCGGCGACCCGGAAGAGGCCGCCGAGATCGGCGAGGCCTTCGCCGCCATCGGCGCCACGCGGCTGTTCGCGTCGCGGCT
CGACACCACGCGGCGCCTGGGCTCCATCCTGGCCGCCGCCGAGGGCGGGCAGATGGCGTTCTGCGACGTTTCCGCCAGTC
CCCATGTGGCCTCGGGCATCTCGCCCATTTCGGCCGTGGCGCTGGCGCGGCTGATCATGCCGCAATCGGCCGAGGCCGAA
CCCAAAGATGAAACCTTCTGGACCGAGGCATCCGCATCATGA

Upstream 100 bases:

>100_bases
CGGGAGGAGGGATCTCGTCCTGCTCCGATTTGTCCGTTCTCCCGCCATCGTTCCAGACGGAGATCCCTCGCTCCGCTCGG
GATAACAGGGAGAGCGGTCG

Downstream 100 bases:

>100_bases
CCACGATGGAAGTTCCCACCCTGGCGCCCCGCCCCACCCTTCGGGCCAAGGGACGCAACATCGTCGCGGTGGCGTCCGGC
AAGGGCGGGGTCGGCAAGAC

Product: flagellar GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MRLKSFTAPTMAEAMELVRQELGDDAIIVSTQRAAGSKGVRITAALESVDADLAVASMLEEATGGSEVSEAVRKALVDHG
VPSKLVERLVNAAHTSGLSQPPLACAAALEAGFTFAHLPEHGAPRPFMLVGPNGSGKSIAAAKLAARSVLKQRQVGVITC
DNIRAGAVEQLAAFTSILEIDLVRARGPESLARVVESVNGAFDLVVIDSPGLNPFKQSDMDYLQALIEAADVEPVLVMAA
GGDPEEAAEIGEAFAAIGATRLFASRLDTTRRLGSILAAAEGGQMAFCDVSASPHVASGISPISAVALARLIMPQSAEAE
PKDETFWTEASAS

Sequences:

>Translated_333_residues
MRLKSFTAPTMAEAMELVRQELGDDAIIVSTQRAAGSKGVRITAALESVDADLAVASMLEEATGGSEVSEAVRKALVDHG
VPSKLVERLVNAAHTSGLSQPPLACAAALEAGFTFAHLPEHGAPRPFMLVGPNGSGKSIAAAKLAARSVLKQRQVGVITC
DNIRAGAVEQLAAFTSILEIDLVRARGPESLARVVESVNGAFDLVVIDSPGLNPFKQSDMDYLQALIEAADVEPVLVMAA
GGDPEEAAEIGEAFAAIGATRLFASRLDTTRRLGSILAAAEGGQMAFCDVSASPHVASGISPISAVALARLIMPQSAEAE
PKDETFWTEASAS
>Mature_333_residues
MRLKSFTAPTMAEAMELVRQELGDDAIIVSTQRAAGSKGVRITAALESVDADLAVASMLEEATGGSEVSEAVRKALVDHG
VPSKLVERLVNAAHTSGLSQPPLACAAALEAGFTFAHLPEHGAPRPFMLVGPNGSGKSIAAAKLAARSVLKQRQVGVITC
DNIRAGAVEQLAAFTSILEIDLVRARGPESLARVVESVNGAFDLVVIDSPGLNPFKQSDMDYLQALIEAADVEPVLVMAA
GGDPEEAAEIGEAFAAIGATRLFASRLDTTRRLGSILAAAEGGQMAFCDVSASPHVASGISPISAVALARLIMPQSAEAE
PKDETFWTEASAS

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 34468; Mature: 34468

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKSFTAPTMAEAMELVRQELGDDAIIVSTQRAAGSKGVRITAALESVDADLAVASMLE
CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHH
EATGGSEVSEAVRKALVDHGVPSKLVERLVNAAHTSGLSQPPLACAAALEAGFTFAHLPE
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCC
HGAPRPFMLVGPNGSGKSIAAAKLAARSVLKQRQVGVITCDNIRAGAVEQLAAFTSILEI
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH
DLVRARGPESLARVVESVNGAFDLVVIDSPGLNPFKQSDMDYLQALIEAADVEPVLVMAA
HHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEC
GGDPEEAAEIGEAFAAIGATRLFASRLDTTRRLGSILAAAEGGQMAFCDVSASPHVASGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCC
SPISAVALARLIMPQSAEAEPKDETFWTEASAS
CHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCC
>Mature Secondary Structure
MRLKSFTAPTMAEAMELVRQELGDDAIIVSTQRAAGSKGVRITAALESVDADLAVASMLE
CCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHH
EATGGSEVSEAVRKALVDHGVPSKLVERLVNAAHTSGLSQPPLACAAALEAGFTFAHLPE
HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCC
HGAPRPFMLVGPNGSGKSIAAAKLAARSVLKQRQVGVITCDNIRAGAVEQLAAFTSILEI
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH
DLVRARGPESLARVVESVNGAFDLVVIDSPGLNPFKQSDMDYLQALIEAADVEPVLVMAA
HHHHCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCHHHHHHHHHHCCCCEEEEEEC
GGDPEEAAEIGEAFAAIGATRLFASRLDTTRRLGSILAAAEGGQMAFCDVSASPHVASGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCC
SPISAVALARLIMPQSAEAEPKDETFWTEASAS
CHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]