| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ylxH [H]
Identifier: 83309595
GI number: 83309595
Start: 529641
End: 530438
Strand: Reverse
Name: ylxH [H]
Synonym: amb0496
Alternate gene names: 83309595
Gene position: 530438-529641 (Counterclockwise)
Preceding gene: 83309596
Following gene: 83309594
Centisome position: 10.68
GC content: 67.17
Gene sequence:
>798_bases ATGACCACGATGGAAGTTCCCACCCTGGCGCCCCGCCCCACCCTTCGGGCCAAGGGACGCAACATCGTCGCGGTGGCGTC CGGCAAGGGCGGGGTCGGCAAGACCTGGTTCTCGATCACCCTGTCCCACGCTTTGGCGCGGGCCAACCAGCGGGTTCTGC TGTTCGACGGCGACCTGGGGCTGGCCAATGTGGACATCCAGCTGGGCCTGATGCCCAAGACCGATCTGGGCAGCGTGGTG GCCGGGCGCATGACGCTCAACCAGGCCCTGACCCGCTTCCCCGAGGGCGGTTTCGACATCATCGCCGGCCGCTCGGGGTC CGGCACGCTGGCCAACATCCCGCTGTCGCGCCTGCAGATGCTGGGCGACGATCTGGTGCTGCTGGCCGGCAATTACGACC GCGTGGTGGTCGACCTGGGGGCCGGCGTGGAGAAGACCACCCGTAACTTCTCGCAGCAGGCGGGCACCATCATGGTGGTG ACCACCGACGAGCCCACCTCGCTGACCGATGCCTATGCCTTCATCAAGGTCACCCATATGGAGCGCCCCGGCACCGACAT GCGCATCGTGGTCAACATGGCCAATTCCACCCGCGAGGGCGAGCGCATCTACAACACCCTGCTCAAGGCCTGCGAAGGCT TCCTGAAGATTTCGCCGCCCCTGGCCGGCGTCATCCGCCGCGATCTCAAGGTCCGGGAAGCCATCCGCAACCAGACGCCC ATCATGATGCGCTCGCCCAACGCCGAGGCCGCCGCCGATGTCGAGGCCATCGTCGAGCGCCTGATCCGCTCGCGCTAG
Upstream 100 bases:
>100_bases TCTCGCCCATTTCGGCCGTGGCGCTGGCGCGGCTGATCATGCCGCAATCGGCCGAGGCCGAACCCAAAGATGAAACCTTC TGGACCGAGGCATCCGCATC
Downstream 100 bases:
>100_bases CACCGCCATGTGCTCGGCCATCCCGCCGGCTCCGCCTCCGGTCGCCCTGCCTCCCCAGGTCAGCGCGCCGGTAGTGCTGA GCGTGGTGGCCGACAAGGGT
Product: chromosome partitioning ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTTMEVPTLAPRPTLRAKGRNIVAVASGKGGVGKTWFSITLSHALARANQRVLLFDGDLGLANVDIQLGLMPKTDLGSVV AGRMTLNQALTRFPEGGFDIIAGRSGSGTLANIPLSRLQMLGDDLVLLAGNYDRVVVDLGAGVEKTTRNFSQQAGTIMVV TTDEPTSLTDAYAFIKVTHMERPGTDMRIVVNMANSTREGERIYNTLLKACEGFLKISPPLAGVIRRDLKVREAIRNQTP IMMRSPNAEAAADVEAIVERLIRSR
Sequences:
>Translated_265_residues MTTMEVPTLAPRPTLRAKGRNIVAVASGKGGVGKTWFSITLSHALARANQRVLLFDGDLGLANVDIQLGLMPKTDLGSVV AGRMTLNQALTRFPEGGFDIIAGRSGSGTLANIPLSRLQMLGDDLVLLAGNYDRVVVDLGAGVEKTTRNFSQQAGTIMVV TTDEPTSLTDAYAFIKVTHMERPGTDMRIVVNMANSTREGERIYNTLLKACEGFLKISPPLAGVIRRDLKVREAIRNQTP IMMRSPNAEAAADVEAIVERLIRSR >Mature_264_residues TTMEVPTLAPRPTLRAKGRNIVAVASGKGGVGKTWFSITLSHALARANQRVLLFDGDLGLANVDIQLGLMPKTDLGSVVA GRMTLNQALTRFPEGGFDIIAGRSGSGTLANIPLSRLQMLGDDLVLLAGNYDRVVVDLGAGVEKTTRNFSQQAGTIMVVT TDEPTSLTDAYAFIKVTHMERPGTDMRIVVNMANSTREGERIYNTLLKACEGFLKISPPLAGVIRRDLKVREAIRNQTPI MMRSPNAEAAADVEAIVERLIRSR
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28617; Mature: 28485
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMEVPTLAPRPTLRAKGRNIVAVASGKGGVGKTWFSITLSHALARANQRVLLFDGDLG CCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC LANVDIQLGLMPKTDLGSVVAGRMTLNQALTRFPEGGFDIIAGRSGSGTLANIPLSRLQM EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCHHHHHH LGDDLVLLAGNYDRVVVDLGAGVEKTTRNFSQQAGTIMVVTTDEPTSLTDAYAFIKVTHM CCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHEEEEEEEEC ERPGTDMRIVVNMANSTREGERIYNTLLKACEGFLKISPPLAGVIRRDLKVREAIRNQTP CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCC IMMRSPNAEAAADVEAIVERLIRSR EEEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TTMEVPTLAPRPTLRAKGRNIVAVASGKGGVGKTWFSITLSHALARANQRVLLFDGDLG CCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC LANVDIQLGLMPKTDLGSVVAGRMTLNQALTRFPEGGFDIIAGRSGSGTLANIPLSRLQM EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCHHHHHH LGDDLVLLAGNYDRVVVDLGAGVEKTTRNFSQQAGTIMVVTTDEPTSLTDAYAFIKVTHM CCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHEEEEEEEEC ERPGTDMRIVVNMANSTREGERIYNTLLKACEGFLKISPPLAGVIRRDLKVREAIRNQTP CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCCC IMMRSPNAEAAADVEAIVERLIRSR EEEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]