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The map label for this gene is capC [H]

Identifier: 82752240

GI number: 82752240

Start: 2693645

End: 2694412

Strand: Reverse

Name: capC [H]

Synonym: SAB2537c

Alternate gene names: 82752240

Gene position: 2694412-2693645 (Counterclockwise)

Preceding gene: 82752241

Following gene: 82752239

Centisome position: 98.25

GC content: 32.55

Gene sequence:

>768_bases
ATGATTGATATTCATAACCATATATTAGTTGATATAGATGATGGTCCTAAAACAATTGAAAAGAGTATTGCACTATTAAA
GCAAGCTAAGGATGAAGGTGTAACAAGTATTGTAGCGACAGCTCATCATTTGCATCCGAGATATGATAATACATTTCAAC
AAGTGCTTGTGAAATTGGCGGAGTTAAGAACGCATCCAGAAGTTCAAGCATTGGATATTAAATTATTTCCCGGGCAAGAA
ATTAGAATTACAGATTCGATTCTGCAAGGCTTAGATAATGGTAGTATTCAAGGTATTAATCGTTCGAAATATTTACTAAT
TGAATTTCCAACGGGCGAAGTACCACATTATACAAAACAATTGTTTTTTGAAATACAATCGAGAGGCTACATACCAATCA
TTGCACATCCTGAAAGAAATAGAAGTATCGCCAAAAATCCAGAAATATTATATGAACTTGTTGCAAATGGGGCATTGAGT
CAATTAACATCGAGTTCTTTAGTTGGTGGATTTGGAAAAAACATTCAAAAGTTATCATTACAATTTATAGAATGTAATTT
GGCTCATTTTGTAGCTTCAGATGCACATTCATGTGACCAAAGACCATTTTTGATGCAAGAATTATTTCACAATCATAAAT
TGAAGAAATATTCGAATGACATTGAAGCATTACTTCGAAATGCCAGTTCAGTAATCAATGATAATTTTGTTTATTTAGAC
AGACCGACTAAGCCAGGAAAAGTGAAGTCGTTTTTGAAATGGTTTTAA

Upstream 100 bases:

>100_bases
TTATTGAAGCAACAGGTGCTAAATTATTAGGTGTAGTCTTAAATAGAATGCCTAAAGATAAAAGTGCTAGTTACTATGCA
TATTATGGGACTGATGAATC

Downstream 100 bases:

>100_bases
CTAAATATATTTTTTCTAATTAGACTGGTATACATGTACCAGTCTTTTTGAGTATGCTTAAAATGAATTATAATCATGAT
TATTTGCAAATTCGTATAAT

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATAHHLHPRYDNTFQQVLVKLAELRTHPEVQALDIKLFPGQE
IRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALS
QLTSSSLVGGFGKNIQKLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD
RPTKPGKVKSFLKWF

Sequences:

>Translated_255_residues
MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATAHHLHPRYDNTFQQVLVKLAELRTHPEVQALDIKLFPGQE
IRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALS
QLTSSSLVGGFGKNIQKLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD
RPTKPGKVKSFLKWF
>Mature_255_residues
MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATAHHLHPRYDNTFQQVLVKLAELRTHPEVQALDIKLFPGQE
IRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALS
QLTSSSLVGGFGKNIQKLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD
RPTKPGKVKSFLKWF

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG4464

COG function: function code GM; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsB/CapC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016667
- InterPro:   IPR004013
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 28892; Mature: 28892

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATAHHLHPRYDNTFQQVLVKLA
CEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ
HHHCCCCEEEEEEEECCCCCEEEHHHHHHCCCCCCEECCCCCCEEEEECCCCCCCHHHHH
LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL
HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCHHCCCHHHHHH
QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
RPTKPGKVKSFLKWF
CCCCCHHHHHHHHCC
>Mature Secondary Structure
MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATAHHLHPRYDNTFQQVLVKLA
CEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
ELRTHPEVQALDIKLFPGQEIRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQ
HHHCCCCEEEEEEEECCCCCEEEHHHHHHCCCCCCEECCCCCCEEEEECCCCCCCHHHHH
LFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSL
HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCHHCCCHHHHHH
QFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
RPTKPGKVKSFLKWF
CCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]