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The map label for this gene is capB [H]

Identifier: 82752241

GI number: 82752241

Start: 2694409

End: 2695101

Strand: Reverse

Name: capB [H]

Synonym: SAB2538c

Alternate gene names: 82752241

Gene position: 2695101-2694409 (Counterclockwise)

Preceding gene: 82752242

Following gene: 82752240

Centisome position: 98.27

GC content: 35.06

Gene sequence:

>693_bases
ATGACGAATAAACGAAGAAGTACATCAAGTTTAATTGTCCATGAACAACCAAAGTCACCTATTAGCGAGAAATTTCGAGG
CATAAGATCAAATATTATGTTTGCAAATCCTGACAGTGCAGTTCAAAGCATTGTAATCACTTCAGAGGCAACAGGCGCAG
GTAAGTCTACAATTGCAGCAAATTTAGCAGTTGCATATGCACAAGCAGGTTATAAAACATTAATCGTAGACGGGGATATG
CGTAAGCCTACGCAACACTATATTTTTAATTTGCCAAACAATGAAGGACTTTCAAGTTTATTGCTAAATTGGTCAACTTA
TCAAGACAGTATTATCTCAACTGAAATTCAAGATTTAGACGTCTTGACGTCTGGGCCAATCCCACCGAATCCGTCAGAGT
TAATTACATCAAGGGCATTTGCAAATTTATATGACACGTTATTGATGAATTATAACTTTGTTATTATCGATACGCCACCA
GTGAACACAGTTACAGATGCGCAATTATTTTCAAAGTTTACCGGCAATGTTGTCTACGTAGTTAATTCGGAAAATAATAA
TAAAGATGAAGTTAAAAAAGGAAAAGAACTTATTGAAGCAACAGGTGCTAAATTATTAGGTGTAGTCTTAAATAGAATGC
CTAAAGATAAAAGTGCTAGTTACTATGCATATTATGGGACTGATGAATCATGA

Upstream 100 bases:

>100_bases
TTATTAGATAAGCGTATTAAGACGGAAGAAGATGTTGAATCGCAACTAGGATTACCTATTTTAGGTTCAATACAAAAATT
TTAATTTACGAGGAATTACC

Downstream 100 bases:

>100_bases
TTGATATTCATAACCATATATTAGTTGATATAGATGATGGTCCTAAAACAATTGAAAAGAGTATTGCACTATTAAAGCAA
GCTAAGGATGAAGGTGTAAC

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTNKRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEATGAGKSTIAANLAVAYAQAGYKTLIVDGDM
RKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPP
VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES

Sequences:

>Translated_230_residues
MTNKRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEATGAGKSTIAANLAVAYAQAGYKTLIVDGDM
RKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPP
VNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES
>Mature_229_residues
TNKRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEATGAGKSTIAANLAVAYAQAGYKTLIVDGDMR
KPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPV
NTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner membrane (Probable) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI87082032, Length=223, Percent_Identity=32.7354260089686, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1787216, Length=204, Percent_Identity=29.9019607843137, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 25255; Mature: 25124

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNKRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEATGAGKSTIAA
CCCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEECCCHHHHEEEEECCCCCCCCHHHHH
NLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLD
HHHHHHHHCCCEEEEEECCCCCCCHHEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
VLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYV
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCEEEE
VNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
TNKRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEATGAGKSTIAA
CCCCCCCCEEEEECCCCCCHHHHHHHHHHCEEEECCCHHHHEEEEECCCCCCCCHHHHH
NLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLD
HHHHHHHHCCCEEEEEECCCCCCCHHEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
VLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYV
EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCEEEE
VNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]