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The map label for this gene is ybbM [H]

Identifier: 82752048

GI number: 82752048

Start: 2471951

End: 2472727

Strand: Reverse

Name: ybbM [H]

Synonym: SAB2335c

Alternate gene names: 82752048

Gene position: 2472727-2471951 (Counterclockwise)

Preceding gene: 82752049

Following gene: 82752047

Centisome position: 90.16

GC content: 36.16

Gene sequence:

>777_bases
ATGAGTAATACAGCATTAGGACTGACGGCATTGCTATTAGTTATTCCAATTATTATTTCTTATAAAGAAGGCCTACATAT
TATTAAAGATTTGATTGTGGCGACACTACGTGCGGTCGTACAATTAATCATTTTAGGATTCTTACTGCACTATATTTTTA
AAATTAGTGACAAATGGCTATTAGTATTATGTGTATTTGTCATTATTGTCAACGCATCTTGGAATACGATTAGTCGATCA
TCACCTGTCATGCACCATGTCTTTTTGATTTCCTTTGTGGCTATCTTTGTTGGAACGGCATTACCGCTTGCAGGTACTAT
TGCGACAGGGGCCATCCAATTTACAGCCAATGAAGTTATACCTATCGGCGGCATGCTTGCAAATAATGGCTTGATTGCAA
TTAATTTAGCTTACCAAAATTTAGATCGTGCATTCGTACAAGATGGTACTAATATTGAATCTAAATTATCACTTGCAGCT
ACACCTAAATTGGCTTCTAAAGGTGCAATACGTGAAAGTATTCGTTTAGCTATAGTGCCAACAATTGATTCAGTTAAAAC
ATATGGGCTTGTGTCGATTCCTGGTATGATGACAGGCTTAATTATTGGTGGCGTACCACCTTTACAAGCGATTAAATTTC
AATTGTTAGTCGTGTTTATTCATACAACTGCGACCATTATGTCTGCTTTGATTGCGACATATTTAAGCTATGGTCAATTT
TTCAATGCAAGACATCAATTAGTAGCACGAAATACGGATGTTAAGAGTGAGTCATGA

Upstream 100 bases:

>100_bases
ATGTGGATTACCCACAGCGATGACCAAAGTATGCGACACTTTCAAAAGCGTATAACAATTGTTGATGGTCAAATTTCTAA
TACAGAGGAGTTGAACCAAC

Downstream 100 bases:

>100_bases
TAGATTTTACCACATCAGATTTAGGCATTAGTTTTAATTGGAAATGAAGTGATGCACACATATAGTAATGCTATTATTTA
GCGCAGCGAAAATATTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSNTALGLTALLLVIPIIISYKEGLHIIKDLIVATLRAVVQLIILGFLLHYIFKISDKWLLVLCVFVIIVNASWNTISRS
SPVMHHVFLISFVAIFVGTALPLAGTIATGAIQFTANEVIPIGGMLANNGLIAINLAYQNLDRAFVQDGTNIESKLSLAA
TPKLASKGAIRESIRLAIVPTIDSVKTYGLVSIPGMMTGLIIGGVPPLQAIKFQLLVVFIHTTATIMSALIATYLSYGQF
FNARHQLVARNTDVKSES

Sequences:

>Translated_258_residues
MSNTALGLTALLLVIPIIISYKEGLHIIKDLIVATLRAVVQLIILGFLLHYIFKISDKWLLVLCVFVIIVNASWNTISRS
SPVMHHVFLISFVAIFVGTALPLAGTIATGAIQFTANEVIPIGGMLANNGLIAINLAYQNLDRAFVQDGTNIESKLSLAA
TPKLASKGAIRESIRLAIVPTIDSVKTYGLVSIPGMMTGLIIGGVPPLQAIKFQLLVVFIHTTATIMSALIATYLSYGQF
FNARHQLVARNTDVKSES
>Mature_257_residues
SNTALGLTALLLVIPIIISYKEGLHIIKDLIVATLRAVVQLIILGFLLHYIFKISDKWLLVLCVFVIIVNASWNTISRSS
PVMHHVFLISFVAIFVGTALPLAGTIATGAIQFTANEVIPIGGMLANNGLIAINLAYQNLDRAFVQDGTNIESKLSLAAT
PKLASKGAIRESIRLAIVPTIDSVKTYGLVSIPGMMTGLIIGGVPPLQAIKFQLLVVFIHTTATIMSALIATYLSYGQFF
NARHQLVARNTDVKSES

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=255, Percent_Identity=45.8823529411765, Blast_Score=233, Evalue=9e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 27796; Mature: 27664

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTALGLTALLLVIPIIISYKEGLHIIKDLIVATLRAVVQLIILGFLLHYIFKISDKWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LVLCVFVIIVNASWNTISRSSPVMHHVFLISFVAIFVGTALPLAGTIATGAIQFTANEVI
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEE
PIGGMLANNGLIAINLAYQNLDRAFVQDGTNIESKLSLAATPKLASKGAIRESIRLAIVP
ECCCEEECCCEEEEEEHHHHHHHHHHCCCCCHHHHEEHHCCCCHHHCCHHHHCEEEEEEE
TIDSVKTYGLVSIPGMMTGLIIGGVPPLQAIKFQLLVVFIHTTATIMSALIATYLSYGQF
CHHHHHHCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNARHQLVARNTDVKSES
HHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNTALGLTALLLVIPIIISYKEGLHIIKDLIVATLRAVVQLIILGFLLHYIFKISDKWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
LVLCVFVIIVNASWNTISRSSPVMHHVFLISFVAIFVGTALPLAGTIATGAIQFTANEVI
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEE
PIGGMLANNGLIAINLAYQNLDRAFVQDGTNIESKLSLAATPKLASKGAIRESIRLAIVP
ECCCEEECCCEEEEEEHHHHHHHHHHCCCCCHHHHEEHHCCCCHHHCCHHHHCEEEEEEE
TIDSVKTYGLVSIPGMMTGLIIGGVPPLQAIKFQLLVVFIHTTATIMSALIATYLSYGQF
CHHHHHHCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNARHQLVARNTDVKSES
HHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]