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The map label for this gene is yjfC [H]

Identifier: 82751984

GI number: 82751984

Start: 2398454

End: 2399368

Strand: Direct

Name: yjfC [H]

Synonym: SAB2268

Alternate gene names: 82751984

Gene position: 2398454-2399368 (Clockwise)

Preceding gene: 82751982

Following gene: 82751985

Centisome position: 87.45

GC content: 30.49

Gene sequence:

>915_bases
ATGTATAAAATCAATATTATTAGATCAGATTCCGTCTATAAGAATATACTCAAGGCACCATTAAACGATCGTGATTCAAT
TTTCACTAAAGAAATATTAGTACCTTTTAAAAAGAAATTTGAAGCACAACATATACCTATTTATAATGATGCCAAACAGA
CAATGAATGCAAATCATTTTTTAAATGCCTTTCAAATTCCACCCAAAGATTTACGTATGTCTGACCAAATATCAATACAA
TACCTGAATAATGATTTCTGGAGTAATTGCGAAAAATATTTAAAAGTTGCTATAGATCAATTTTCAAATTATAGTATCCC
ATCTCAAGTTTCTAATTATCATTTCACAGTATTACTTGGAGATAGCCAAAAACCACTTATGTATCTAAATAAAAATCGCG
GTGGTGATGGTGGCATACCAGGTTATATTATGATTTATTTAGTGCCGAGTACACGTACAATTAATTCTATGAAAAGCTTA
ATTACACATGAAGTAAATCATAATATGCGCTATCAATATATTGATTGGGATGGTGGAAGTTTGATTGAATTGATTATTGC
AGAAGGATTAGCTGAAAACTATGTAGAATCATTGTATGGTAAAGCGCATATTGGACCGTGGGTAACAAATACTAATTGGA
GTCGTGATAACGTAAAAATTAAAAATACTATTTATAATCATTTACATTTAAAGCATATATTTGAATCGATGCCTTATCTC
TATGGTGATGATATTAATAAACTTCAAGGTAGGCCTATCGTTGGCTTATCTCATACTGCCGGATATGCATGTGGTTATCA
CTTGGTGAAATACTTTTTACAAAAAACAAACATACCTATTGAAGTTGCCACAACACTTCCAGCACAAAAAATAATAAATG
AGGTGACTGAATTTTGGCATACACATACACTTTAA

Upstream 100 bases:

>100_bases
ATTATTTAGGAACACTCACATACTTTTCTTAAAATTTTTTCAATTAGTTACAATTACTGCTTGAAAATTACGTTACGTTA
CCCTTTATGCTGACAATATC

Downstream 100 bases:

>100_bases
AAGATATTATTGAAATTACAGGTGTAACTAAAAGAACTTTACATTATTACGATGAAATAGGATTATTAGTTCCAGATAAA
AATGATAAAAATTATCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MYKINIIRSDSVYKNILKAPLNDRDSIFTKEILVPFKKKFEAQHIPIYNDAKQTMNANHFLNAFQIPPKDLRMSDQISIQ
YLNNDFWSNCEKYLKVAIDQFSNYSIPSQVSNYHFTVLLGDSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTRTINSMKSL
ITHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
YGDDINKLQGRPIVGLSHTAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWHTHTL

Sequences:

>Translated_304_residues
MYKINIIRSDSVYKNILKAPLNDRDSIFTKEILVPFKKKFEAQHIPIYNDAKQTMNANHFLNAFQIPPKDLRMSDQISIQ
YLNNDFWSNCEKYLKVAIDQFSNYSIPSQVSNYHFTVLLGDSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTRTINSMKSL
ITHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
YGDDINKLQGRPIVGLSHTAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWHTHTL
>Mature_304_residues
MYKINIIRSDSVYKNILKAPLNDRDSIFTKEILVPFKKKFEAQHIPIYNDAKQTMNANHFLNAFQIPPKDLRMSDQISIQ
YLNNDFWSNCEKYLKVAIDQFSNYSIPSQVSNYHFTVLLGDSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTRTINSMKSL
ITHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
YGDDINKLQGRPIVGLSHTAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWHTHTL

Specific function: Unknown

COG id: COG5504

COG function: function code O; Predicted Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018728 [H]

Pfam domain/function: PF10026 DUF2268 [H]

EC number: NA

Molecular weight: Translated: 35140; Mature: 35140

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKINIIRSDSVYKNILKAPLNDRDSIFTKEILVPFKKKFEAQHIPIYNDAKQTMNANHF
CEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHH
LNAFQIPPKDLRMSDQISIQYLNNDFWSNCEKYLKVAIDQFSNYSIPSQVSNYHFTVLLG
HHEECCCHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
DSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTRTINSMKSLITHEVNHNMRYQYIDWDGGS
CCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH
LIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCE
YGDDINKLQGRPIVGLSHTAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWH
ECCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
THTL
HCCC
>Mature Secondary Structure
MYKINIIRSDSVYKNILKAPLNDRDSIFTKEILVPFKKKFEAQHIPIYNDAKQTMNANHF
CEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHH
LNAFQIPPKDLRMSDQISIQYLNNDFWSNCEKYLKVAIDQFSNYSIPSQVSNYHFTVLLG
HHEECCCHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
DSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTRTINSMKSLITHEVNHNMRYQYIDWDGGS
CCCCCEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCH
LIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCE
YGDDINKLQGRPIVGLSHTAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWH
ECCCHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
THTL
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]