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The map label for this gene is 82751982

Identifier: 82751982

GI number: 82751982

Start: 2396391

End: 2396819

Strand: Direct

Name: 82751982

Synonym: SAB2266

Alternate gene names: NA

Gene position: 2396391-2396819 (Clockwise)

Preceding gene: 82751981

Following gene: 82751984

Centisome position: 87.38

GC content: 29.84

Gene sequence:

>429_bases
ATGATATTGAACTTCAATCAATTCGAGAATCAAAACTTTTTTAACGGTAATCCAAGTGACACATTTAAAGATTTAGGTAA
ACAAGTATTTAATTACTTTTCAACACCTTCATTTGTAACGAATATATATGAAACAGACGAATTATATTACTTAGAAGCTG
AACTAGCAGGTGTAAATAAAGAAGATATTAGTATCGATTTCAATAATAATACGCTCACTATTCAAGCTACTAGAAGCGCA
AAACACAAATCTGAACAACTCATTTTAGATGAGCGTAACTTCGAATCATTAAAGCGTCAATTTGATTTTGAAGCTGTTGA
TAAGCAACATATTACTGCTAGTTTTGAAAATGGGTTATTAACTATTACCTTGCCTAAAATCAAACCAAGCAATGAAACTA
CTTCATCAACATCTATTCCAATTTCATAG

Upstream 100 bases:

>100_bases
ATTCTACCCATTTATAACTTTTTTACCTCCCCTTTTACTTTATCTTTTTTAATACTACTCATATAATGGCTTTGTAATAC
AAATTTATATAATGGAAGTG

Downstream 100 bases:

>100_bases
TTAAATTTAAAATGAATACACTACTAAAGCCTTAATGTCATGCTACGAATATCTCGCATGATATTAAGGCTTTGTATTTA
ACTAAATGAATGTCATGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQATRSA
KHKSEQLILDERNFESLKRQFDFEAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS

Sequences:

>Translated_142_residues
MILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQATRSA
KHKSEQLILDERNFESLKRQFDFEAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS
>Mature_142_residues
MILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNNNTLTIQATRSA
KHKSEQLILDERNFESLKRQFDFEAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16276; Mature: 16276

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNK
CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEECCEEEEEEEEECCCCC
EDISIDFNNNTLTIQATRSAKHKSEQLILDERNFESLKRQFDFEAVDKQHITASFENGLL
CCEEEEECCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHCCCHHCCCHHEEEECCCCEE
TITLPKIKPSNETTSSTSIPIS
EEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MILNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNK
CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHEEECCEEEEEEEEECCCCC
EDISIDFNNNTLTIQATRSAKHKSEQLILDERNFESLKRQFDFEAVDKQHITASFENGLL
CCEEEEECCCEEEEEECCCCCCCCCEEEECCCCHHHHHHHCCCHHCCCHHEEEECCCCEE
TITLPKIKPSNETTSSTSIPIS
EEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9657935 [H]