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The map label for this gene is yhbJ [H]

Identifier: 82751948

GI number: 82751948

Start: 2361336

End: 2361983

Strand: Reverse

Name: yhbJ [H]

Synonym: SAB2232c

Alternate gene names: 82751948

Gene position: 2361983-2361336 (Counterclockwise)

Preceding gene: 82751950

Following gene: 82751947

Centisome position: 86.12

GC content: 31.94

Gene sequence:

>648_bases
ATGAAAAAGATGATATTAATTAATGTCATTACGGTTGTTGTACTGTTAGCAATTGGGATTGCTGGTTTTTATTTCTGGAA
TAAAACAACAAGTTATATAACAACTGATAATGCTAAAGTAAATGGCGATCAAATTAAAATAGCAAGTCCAGCGTCTGGGC
AAATCAAATCACTAAATGTTAAGCAAGGTGATAAACTTGATAAAGGTGATAAAGTAGCAACAGTTACTGTTCAAGGTCAA
GATGGCGAAACTAAAGATATGGAACTTAAAATGCCACAAAAAGGTACAATTGCTAAATTAGATGGCATGGAAGGTTCTAT
GGTACAAGCAGGCAATCCAATTGCTTATGCTTACAATTTAGATGATTTATATGTAACTGCAAATATTGACGAAAAAGATA
TTAAAGATGTTGAAGTTGGTAAAGATGTTGATGTGACTATTGACGGTCAAAAAGCTTCTGTTAAAGGTAAAGTTGATAGT
ATTGGAAAAGCTACTGCTGCTAGTTTTTCATTAATGCCATCATCAAATAGTGATGGTAACTATACTAAAGTATCTCAAGT
TATACCTGTTAAAATTACGTTAGATTCAGAACCGTCTAAACAAGTTGTTCCTGGAATGAACGCTGAAGTAAAAATTCATA
AAAATTAA

Upstream 100 bases:

>100_bases
TTTAACCAACACTCTTATAAAAATTGTTGGTGTTTTTTTAGTTATCATGTCTCTATAATAAATAAAGTGAATTTTAAAAG
CAAATAGGAGGAAATGTTTC

Downstream 100 bases:

>100_bases
GGGGGTCATTAAATGACTACGACCTTCATTATTAGCTACATTGTTTTAGCGCTCATTATTGTTGGGGTTATCAATTTATT
ATTAATAAGATCAAGAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYITTDNAKVNGDQIKIASPASGQIKSLNVKQGDKLDKGDKVATVTVQGQ
DGETKDMELKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNLDDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASVKGKVDS
IGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLDSEPSKQVVPGMNAEVKIHKN

Sequences:

>Translated_215_residues
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYITTDNAKVNGDQIKIASPASGQIKSLNVKQGDKLDKGDKVATVTVQGQ
DGETKDMELKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNLDDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASVKGKVDS
IGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLDSEPSKQVVPGMNAEVKIHKN
>Mature_215_residues
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYITTDNAKVNGDQIKIASPASGQIKSLNVKQGDKLDKGDKVATVTVQGQ
DGETKDMELKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNLDDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASVKGKVDS
IGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLDSEPSKQVVPGMNAEVKIHKN

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788711, Length=113, Percent_Identity=31.858407079646, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789041, Length=112, Percent_Identity=30.3571428571429, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000089
- InterPro:   IPR006143
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 23013; Mature: 23013

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYITTDNAKVNGDQIKIASPASGQIKSLNV
CCEEEEHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCEECCCEEEEECCCCCCEEEEEC
KQGDKLDKGDKVATVTVQGQDGETKDMELKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
CCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCEEEEEEC
DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASVKGKVDSIGKATAASFSLMPSSNSDGN
CEEEEEECCCHHCCCEEECCCCEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCCCCCC
YTKVSQVIPVKITLDSEPSKQVVPGMNAEVKIHKN
EEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYITTDNAKVNGDQIKIASPASGQIKSLNV
CCEEEEHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCEECCCEEEEECCCCCCEEEEEC
KQGDKLDKGDKVATVTVQGQDGETKDMELKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
CCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCEEEEEEC
DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASVKGKVDSIGKATAASFSLMPSSNSDGN
CEEEEEECCCHHCCCEEECCCCEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCCCCCC
YTKVSQVIPVKITLDSEPSKQVVPGMNAEVKIHKN
EEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]