| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is hysA2
Identifier: 82751799
GI number: 82751799
Start: 2230263
End: 2232692
Strand: Direct
Name: hysA2
Synonym: SAB2082
Alternate gene names: 82751799
Gene position: 2230263-2232692 (Clockwise)
Preceding gene: 82751795
Following gene: 82751801
Centisome position: 81.32
GC content: 33.37
Gene sequence:
>2430_bases ATGACATATAGAATGAAGAAATGGCAAAAATTATCCACCATTACGTTATTAATGGCCGGTGGGATTACTTTTAATGATAG TGAATTCAGAAGTGTTGATAAACATCAAATCGCTGTGGCTGATACGAATGTTCAAACGCCAAATTATGAGAAATTGAAGA ATACATGGCTGGACGTTAACTATGGTTATGATAAGTATGATGAGAGCAATCCAGACATGAAGAAAAAGTTTGAGGCTACG GAGAAAGAGGCAAGGAAATTACTTAGTGAGATGAAAACTGAAAGTGATAGGAAATACTTGTGGGAAAACTCAAAAGATTT AGATACGAAGTCTGCGGATATGACTCGTACCTATCGTAATATTGAGAAAATCGCAGAAGCGATGAAGCATCCTAAAACCA CTTTAAAAAATGACGAAAATAAGAAGAAAGTGAAAGATGCCCTTGAGTGGCTGCATAAAAATGCATATGGAAAAGAACCA GGTAAAAAAGTTGCTGATCTGAAAACTAATTTCTCAAAATCAGCACCTCAAAAGAATACCAATTTAAATTGGTGGGATTA TGAAATTGGAACACCTAGAGCACTAACAAATACCCTTATACTCTTAAAAGAAGATTTTACTGATGAAGAAAAGAAAAAAT ACACTGCCCCTATTAAAACTTTCGCCCCAAAAAGTGATGAAATATTATCTTCTGTAGGAAAAGCTGAACCTGCTAAAGGC GGAAATTTAGTAGACATTTCTAAAGTAAAACTTTTAGAAAGTATTATCGAAGAAGATAAAGATATGATGAAAAATTCAAT AGATTCATTTAATAAAGTCTTCACTTACGTTCAAGATTCTGCCACTGATAAAGAACGTAATGGATTTTATAAAGATGGTT CATATATCGACCATAAAGATGTCCCATACACTGGTGCTTATGGCGTTGTACTCTTAGAGGGGATTTCTCAAATGATGCCG ATGATAAAAGAAACACCTTTTAATGATAAAACCCAAAATAATACAACCTTAACATCATGGATTGACGACGGATTTATGCC ACTCATTTATAAAGGTGAAATGATGGATTTATCACGTGGTAGAGCCATTAGCCGAGAAAATGAAACGAGTCACTCAGCAT CTGCAACTGTAATGAAATCATTGTTGAGATTAAGTGATGCCATGGATGAGTCTACAAAAGCTAAATATAAACAAATTGTC AAAAACTCTGTTAAATCTGATTCAAGTTACGGCCAAAATGATACATTAAGCTCTTATTCAGACATAGATAAAATGAAGTC TTTAATGACAGATAGCACTATTTCTACTAACGGTTTAACACAACAACTTAAAATATATAATGCCATGGATCGTGTCACCT ATCACAATAAAGACTTAGACTTTGCATTTGGCTTAAGTATGACGTCGAAAAACGTCGCACGTTACGAAAATATCAACGGA GAGAACTTAAAAGGTTGGCATACTGGTGCTGGAATGTCTTATTTATACAATAGCGATGTGAGACACTACCGTGATAACTT CTGGGCAACAGCTGATATGAAACGATTAGCAGATACTACAACTTTAGAAAATGAAGAACCTAAAGGTACGGATGTTAAAA AGTCTAGTAAAACTTTTGTAGGCGGAACAAAATTTGATGACCAACATGCTAGTATTGGAATGGATTTTGAAAATCAGGAC AAAACTTTAACTGCCAAAAAATCATATTTCATATTAAACGATAAAATTGTCTTCTTAGGAACTGGCATTAAAACTACTGA TTCATCAAAGAATCCAGTTACAACGATTGAAAATCGCAAAGCGCATGGGTATACGTTATATACAGACGATAAACAAACAA CCAATTCCAATAATCAGGAAACCAATTCAGTCTTTTTAGAATCAACGAATAGCACTCAAAACAATATAGGCTATCATTTT TTAAACAAATCGAAAATAACTGTAAAAAAAGAAAGTCATACTGGTAAGTGGAGTGATATAAATAAAAGCCAAAAGGATAC ACAAAAAACTGATGAGTATTATGAAGTAACTCAAAAGCATTCTAATACAGATGATAAATATGCATATGTGTTGTATCCAG GAATAACAAAAGATAATTTTAAATCCAAAGCAAGCCAAGTAACTGTCGTTAAACAAGATGATGACTTCCACGTTGTGAAA GATAATGAATCGGTTTGGGCTGGTGTTAATTACAGTGATAGCACTCAAACTTTTGACATTAATGGTACTAAAGTCGAAGT TAAAGCCAAAGGAATGTTTATTCTTAAAAAGAAAGATGATAACACTTATGAATGTAGCTTCTATAATCCCGAATCTACAA ATTCCGCTTCAGATATTGAATCTAAAATTTCAATGACTGGATACTCTATTACAAACAAAAATACGTCGAATACTAATGAA TCCGGCGTGCGCTTTGAATTAACTAAATAA
Upstream 100 bases:
>100_bases TAGAAAGTCATTTGTATACGTTAACAAATTTTGAAAAATTGAATCATTATTTAATCATAATATTCATTGCGCACGCGCAA CACAAAAAGGAGACATGTCA
Downstream 100 bases:
>100_bases GCAAGAAAATCTCGGCACTATACCATTTTTATAGTGTCGAGATTTTATAAGTATCGCCATCATTCACCTTGTAAACCGCA GACCACATCACCCTTGATAA
Product: hyaluronate lyase
Products: NA
Alternate protein names: Hyaluronidase; HYase [H]
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MTYRMKKWQKLSTITLLMAGGITFNDSEFRSVDKHQIAVADTNVQTPNYEKLKNTWLDVNYGYDKYDESNPDMKKKFEAT EKEARKLLSEMKTESDRKYLWENSKDLDTKSADMTRTYRNIEKIAEAMKHPKTTLKNDENKKKVKDALEWLHKNAYGKEP GKKVADLKTNFSKSAPQKNTNLNWWDYEIGTPRALTNTLILLKEDFTDEEKKKYTAPIKTFAPKSDEILSSVGKAEPAKG GNLVDISKVKLLESIIEEDKDMMKNSIDSFNKVFTYVQDSATDKERNGFYKDGSYIDHKDVPYTGAYGVVLLEGISQMMP MIKETPFNDKTQNNTTLTSWIDDGFMPLIYKGEMMDLSRGRAISRENETSHSASATVMKSLLRLSDAMDESTKAKYKQIV KNSVKSDSSYGQNDTLSSYSDIDKMKSLMTDSTISTNGLTQQLKIYNAMDRVTYHNKDLDFAFGLSMTSKNVARYENING ENLKGWHTGAGMSYLYNSDVRHYRDNFWATADMKRLADTTTLENEEPKGTDVKKSSKTFVGGTKFDDQHASIGMDFENQD KTLTAKKSYFILNDKIVFLGTGIKTTDSSKNPVTTIENRKAHGYTLYTDDKQTTNSNNQETNSVFLESTNSTQNNIGYHF LNKSKITVKKESHTGKWSDINKSQKDTQKTDEYYEVTQKHSNTDDKYAYVLYPGITKDNFKSKASQVTVVKQDDDFHVVK DNESVWAGVNYSDSTQTFDINGTKVEVKAKGMFILKKKDDNTYECSFYNPESTNSASDIESKISMTGYSITNKNTSNTNE SGVRFELTK
Sequences:
>Translated_809_residues MTYRMKKWQKLSTITLLMAGGITFNDSEFRSVDKHQIAVADTNVQTPNYEKLKNTWLDVNYGYDKYDESNPDMKKKFEAT EKEARKLLSEMKTESDRKYLWENSKDLDTKSADMTRTYRNIEKIAEAMKHPKTTLKNDENKKKVKDALEWLHKNAYGKEP GKKVADLKTNFSKSAPQKNTNLNWWDYEIGTPRALTNTLILLKEDFTDEEKKKYTAPIKTFAPKSDEILSSVGKAEPAKG GNLVDISKVKLLESIIEEDKDMMKNSIDSFNKVFTYVQDSATDKERNGFYKDGSYIDHKDVPYTGAYGVVLLEGISQMMP MIKETPFNDKTQNNTTLTSWIDDGFMPLIYKGEMMDLSRGRAISRENETSHSASATVMKSLLRLSDAMDESTKAKYKQIV KNSVKSDSSYGQNDTLSSYSDIDKMKSLMTDSTISTNGLTQQLKIYNAMDRVTYHNKDLDFAFGLSMTSKNVARYENING ENLKGWHTGAGMSYLYNSDVRHYRDNFWATADMKRLADTTTLENEEPKGTDVKKSSKTFVGGTKFDDQHASIGMDFENQD KTLTAKKSYFILNDKIVFLGTGIKTTDSSKNPVTTIENRKAHGYTLYTDDKQTTNSNNQETNSVFLESTNSTQNNIGYHF LNKSKITVKKESHTGKWSDINKSQKDTQKTDEYYEVTQKHSNTDDKYAYVLYPGITKDNFKSKASQVTVVKQDDDFHVVK DNESVWAGVNYSDSTQTFDINGTKVEVKAKGMFILKKKDDNTYECSFYNPESTNSASDIESKISMTGYSITNKNTSNTNE SGVRFELTK >Mature_808_residues TYRMKKWQKLSTITLLMAGGITFNDSEFRSVDKHQIAVADTNVQTPNYEKLKNTWLDVNYGYDKYDESNPDMKKKFEATE KEARKLLSEMKTESDRKYLWENSKDLDTKSADMTRTYRNIEKIAEAMKHPKTTLKNDENKKKVKDALEWLHKNAYGKEPG KKVADLKTNFSKSAPQKNTNLNWWDYEIGTPRALTNTLILLKEDFTDEEKKKYTAPIKTFAPKSDEILSSVGKAEPAKGG NLVDISKVKLLESIIEEDKDMMKNSIDSFNKVFTYVQDSATDKERNGFYKDGSYIDHKDVPYTGAYGVVLLEGISQMMPM IKETPFNDKTQNNTTLTSWIDDGFMPLIYKGEMMDLSRGRAISRENETSHSASATVMKSLLRLSDAMDESTKAKYKQIVK NSVKSDSSYGQNDTLSSYSDIDKMKSLMTDSTISTNGLTQQLKIYNAMDRVTYHNKDLDFAFGLSMTSKNVARYENINGE NLKGWHTGAGMSYLYNSDVRHYRDNFWATADMKRLADTTTLENEEPKGTDVKKSSKTFVGGTKFDDQHASIGMDFENQDK TLTAKKSYFILNDKIVFLGTGIKTTDSSKNPVTTIENRKAHGYTLYTDDKQTTNSNNQETNSVFLESTNSTQNNIGYHFL NKSKITVKKESHTGKWSDINKSQKDTQKTDEYYEVTQKHSNTDDKYAYVLYPGITKDNFKSKASQVTVVKQDDDFHVVKD NESVWAGVNYSDSTQTFDINGTKVEVKAKGMFILKKKDDNTYECSFYNPESTNSASDIESKISMTGYSITNKNTSNTNES GVRFELTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide lyase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008929 - InterPro: IPR011013 - InterPro: IPR014718 - InterPro: IPR011071 - InterPro: IPR012970 - InterPro: IPR004103 - InterPro: IPR003159 - InterPro: IPR012329 [H]
Pfam domain/function: PF02278 Lyase_8; PF02884 Lyase_8_C; PF08124 Lyase_8_N [H]
EC number: =4.2.2.1 [H]
Molecular weight: Translated: 92126; Mature: 91994
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRMKKWQKLSTITLLMAGGITFNDSEFRSVDKHQIAVADTNVQTPNYEKLKNTWLDVN CCCCHHHHHHHHHEEEEEECCCEECCHHHHCCCCCEEEEEECCCCCCCHHHHHCCEEEEE YGYDKYDESNPDMKKKFEATEKEARKLLSEMKTESDRKYLWENSKDLDTKSADMTRTYRN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHH IEKIAEAMKHPKTTLKNDENKKKVKDALEWLHKNAYGKEPGKKVADLKTNFSKSAPQKNT HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCC NLNWWDYEIGTPRALTNTLILLKEDFTDEEKKKYTAPIKTFAPKSDEILSSVGKAEPAKG CCCEEEEECCCCHHHHHEEEEEECCCCCHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCCC GNLVDISKVKLLESIIEEDKDMMKNSIDSFNKVFTYVQDSATDKERNGFYKDGSYIDHKD CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC VPYTGAYGVVLLEGISQMMPMIKETPFNDKTQNNTTLTSWIDDGFMPLIYKGEMMDLSRG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCEEECCCC RAISRENETSHSASATVMKSLLRLSDAMDESTKAKYKQIVKNSVKSDSSYGQNDTLSSYS CCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH DIDKMKSLMTDSTISTNGLTQQLKIYNAMDRVTYHNKDLDFAFGLSMTSKNVARYENING HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHCCCCC ENLKGWHTGAGMSYLYNSDVRHYRDNFWATADMKRLADTTTLENEEPKGTDVKKSSKTFV CCCCCEECCCCCHHHCCCHHHHHHHCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE GGTKFDDQHASIGMDFENQDKTLTAKKSYFILNDKIVFLGTGIKTTDSSKNPVTTIENRK CCCCCCCCCCEECCCCCCCCCEEEECCEEEEEECEEEEEECCEECCCCCCCCCEEECCCC AHGYTLYTDDKQTTNSNNQETNSVFLESTNSTQNNIGYHFLNKSKITVKKESHTGKWSDI CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCCCC NKSQKDTQKTDEYYEVTQKHSNTDDKYAYVLYPGITKDNFKSKASQVTVVKQDDDFHVVK CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHCCCCEEEEEEECCCEEEEE DNESVWAGVNYSDSTQTFDINGTKVEVKAKGMFILKKKDDNTYECSFYNPESTNSASDIE CCCCEEEECCCCCCCEEEECCCCEEEEEECCEEEEEECCCCEEEEEEECCCCCCCHHHHH SKISMTGYSITNKNTSNTNESGVRFELTK HHHEECCEEEECCCCCCCCCCCEEEEECC >Mature Secondary Structure TYRMKKWQKLSTITLLMAGGITFNDSEFRSVDKHQIAVADTNVQTPNYEKLKNTWLDVN CCCHHHHHHHHHEEEEEECCCEECCHHHHCCCCCEEEEEECCCCCCCHHHHHCCEEEEE YGYDKYDESNPDMKKKFEATEKEARKLLSEMKTESDRKYLWENSKDLDTKSADMTRTYRN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHH IEKIAEAMKHPKTTLKNDENKKKVKDALEWLHKNAYGKEPGKKVADLKTNFSKSAPQKNT HHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCC NLNWWDYEIGTPRALTNTLILLKEDFTDEEKKKYTAPIKTFAPKSDEILSSVGKAEPAKG CCCEEEEECCCCHHHHHEEEEEECCCCCHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCCC GNLVDISKVKLLESIIEEDKDMMKNSIDSFNKVFTYVQDSATDKERNGFYKDGSYIDHKD CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC VPYTGAYGVVLLEGISQMMPMIKETPFNDKTQNNTTLTSWIDDGFMPLIYKGEMMDLSRG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECCEEECCCC RAISRENETSHSASATVMKSLLRLSDAMDESTKAKYKQIVKNSVKSDSSYGQNDTLSSYS CCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH DIDKMKSLMTDSTISTNGLTQQLKIYNAMDRVTYHNKDLDFAFGLSMTSKNVARYENING HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHCCCCC ENLKGWHTGAGMSYLYNSDVRHYRDNFWATADMKRLADTTTLENEEPKGTDVKKSSKTFV CCCCCEECCCCCHHHCCCHHHHHHHCCEECHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE GGTKFDDQHASIGMDFENQDKTLTAKKSYFILNDKIVFLGTGIKTTDSSKNPVTTIENRK CCCCCCCCCCEECCCCCCCCCEEEECCEEEEEECEEEEEECCEECCCCCCCCCEEECCCC AHGYTLYTDDKQTTNSNNQETNSVFLESTNSTQNNIGYHFLNKSKITVKKESHTGKWSDI CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCCCC NKSQKDTQKTDEYYEVTQKHSNTDDKYAYVLYPGITKDNFKSKASQVTVVKQDDDFHVVK CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHCCCCEEEEEEECCCEEEEE DNESVWAGVNYSDSTQTFDINGTKVEVKAKGMFILKKKDDNTYECSFYNPESTNSASDIE CCCCEEEECCCCCCCEEEECCCCEEEEEECCEEEEEECCCCEEEEEEECCCCCCCHHHHH SKISMTGYSITNKNTSNTNESGVRFELTK HHHEECCEEEECCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7557301 [H]