| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
Click here to switch to the map view.
The map label for this gene is 82751776
Identifier: 82751776
GI number: 82751776
Start: 2205222
End: 2206292
Strand: Reverse
Name: 82751776
Synonym: SAB2059c
Alternate gene names: NA
Gene position: 2206292-2205222 (Counterclockwise)
Preceding gene: 82751777
Following gene: 82751775
Centisome position: 80.45
GC content: 30.35
Gene sequence:
>1071_bases ATGGCACACGTTAACATAAATATATCTAAGATTAAATATAACGCCAAAGTACTTCAAACAGTTTTTCAAAGTAAAAATAT GCAATTCACACCAGTAATTAAGTGCATAGCTGGTGACCGTACAATTGTAGAAAGCTTAAAAGCTTTAGGTATCAATCATG TTGCAGAATCCAGATTGGATAACATAATTAGTATTGCAGATCAGGATTTAACATATACGTTATTGCGTACGCCTGCCAAA AAAGAGATTTCAGATATGATAGAAAAAGTTGATATGAGTATCCAAACAGAATTATCTACCATACATCAAATAAATGAAGT AGCAGAAGTTTTAGGAAAAAAACATAAGATTTTATTAATGGTAGATTGGAAAGATGGCCGTGAAGGTGTTCTGACTTATG ATGTTTTAGATTATATTAAAAAGATTATTCACTTGAAAAATATCCATTTTGTAGGTTTAGCATTCAATTTTATGTGTTTT AAATCTGATGCGCCAAGTGATGATGATATCTTTATGATTAATCGATTCGTCTCAGCTGTTGAAAGAGAAATAGGATATCG ATTGAAAATTATTTCAGGTGGTAATTCTAGCATGTTACCACAACTTTTATATAATGATTTGGGTAAAATAAATGAATTGC GAATAGGTGAAACGTTGTTTAGAGGTGTTGATACAACTACAAATCAAGCGATAGCTATGTTATATCAAGATGCGATTACA TTGGAGGCTGAGATTTTAGAAATTAAACCTCGAGTTAATACACAAACGCATGAATCATTCATACAAGCTATTGTAGATAT TGGTTATTTAGATACAAAAGTCGATAATATTTCACCTATGGATCAGCATATCAATATTTTAGGCGCTTCGAGTGATCATT TAATGCTTGATTTAAATGGTCAAGGACACTATCAAGTTGGAGATCATATATCTTTTTCATTAAATTATGAAGCACTTTCT CATTCGATGTATATGAAAAATTTACATAAGGTATATATTGATGATTCAAAGATTGATACGCTACTTCAAAATTTTGATGT GAAATCTCCTGATATGGTAAACCAATATTAA
Upstream 100 bases:
>100_bases TACTGTCAAAGCGTTATTAAATATGAGAATGGAAAATAAAGTAAAGCAATATTTAAATATTGAGTTAGATAATCCGATAA AAAAAGAGGTGTAGTACTAC
Downstream 100 bases:
>100_bases TATATTAATCAATAAGTCTAAGTTGACTAGTTATACTACATATCGTTTACACGGTTGTATCATAATTGTTCAACTTAGAT TTTTTGTATTTGTTGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Alanine Racemase Domain Protein; Alanine Racemase Domain-Containing Protein; Alanine Racemase N-Terminal Domain Family; Alanine Racemase N-Terminal Domain Protein; Alanine Racemase-Like Protein; Ornithine Racemase; Alanine Racemase N-Terminal
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVESLKALGINHVAESRLDNIISIADQDLTYTLLRTPAK KEISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLMVDWKDGREGVLTYDVLDYIKKIIHLKNIHFVGLAFNFMCF KSDAPSDDDIFMINRFVSAVEREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAIT LEAEILEIKPRVNTQTHESFIQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNGQGHYQVGDHISFSLNYEALS HSMYMKNLHKVYIDDSKIDTLLQNFDVKSPDMVNQY
Sequences:
>Translated_356_residues MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVESLKALGINHVAESRLDNIISIADQDLTYTLLRTPAK KEISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLMVDWKDGREGVLTYDVLDYIKKIIHLKNIHFVGLAFNFMCF KSDAPSDDDIFMINRFVSAVEREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAIT LEAEILEIKPRVNTQTHESFIQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNGQGHYQVGDHISFSLNYEALS HSMYMKNLHKVYIDDSKIDTLLQNFDVKSPDMVNQY >Mature_355_residues AHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVESLKALGINHVAESRLDNIISIADQDLTYTLLRTPAKK EISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLMVDWKDGREGVLTYDVLDYIKKIIHLKNIHFVGLAFNFMCFK SDAPSDDDIFMINRFVSAVEREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAITL EAEILEIKPRVNTQTHESFIQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNGQGHYQVGDHISFSLNYEALSH SMYMKNLHKVYIDDSKIDTLLQNFDVKSPDMVNQY
Specific function: Unknown
COG id: COG3457
COG function: function code E; Predicted amino acid racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40383; Mature: 40252
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVESLKALGINHVAESRLD CEEEEEEEEEEEEHHHHHHHHHHCCCCEEHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHH NIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLM HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE VDWKDGREGVLTYDVLDYIKKIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINRFVSAV EECCCCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHH EREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAIT HHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHE LEAEILEIKPRVNTQTHESFIQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNG EEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC QGHYQVGDHISFSLNYEALSHSMYMKNLHKVYIDDSKIDTLLQNFDVKSPDMVNQY CCCEEECCEEEEEEEHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AHVNINISKIKYNAKVLQTVFQSKNMQFTPVIKCIAGDRTIVESLKALGINHVAESRLD EEEEEEEEEEEEHHHHHHHHHHCCCCEEHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHH NIISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVAEVLGKKHKILLM HHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE VDWKDGREGVLTYDVLDYIKKIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINRFVSAV EECCCCCCCEEEHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHH EREIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAMLYQDAIT HHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHE LEAEILEIKPRVNTQTHESFIQAIVDIGYLDTKVDNISPMDQHINILGASSDHLMLDLNG EEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECC QGHYQVGDHISFSLNYEALSHSMYMKNLHKVYIDDSKIDTLLQNFDVKSPDMVNQY CCCEEECCEEEEEEEHHHHHHHHHHHHHHEEEECCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA