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The map label for this gene is yfmC [H]

Identifier: 82751775

GI number: 82751775

Start: 2203846

End: 2204859

Strand: Reverse

Name: yfmC [H]

Synonym: SAB2058c

Alternate gene names: 82751775

Gene position: 2204859-2203846 (Counterclockwise)

Preceding gene: 82751776

Following gene: 82751774

Centisome position: 80.4

GC content: 30.97

Gene sequence:

>1014_bases
ATGAAGTTATACATATTAAGGAGTGGAACGATGAGAGGTCTAAAAACTTTTAGTATATTGGGATTAATAGTTGCCTTATT
TTTAGTTGCAGCTTGTGGTAATACGGATAATTCAAGTAAAAAAGAATCATCAACTAAAGATACTATTTCGGTAAAAGATG
AAAATGGCACAGTAAAAGTACCTAAAGATGCAAAACGTATCGTTGTATTAGAGTACTCATTTGCAGATGCATTAGCAGCA
TTAGACGTTAAACCAGTTGGTATTGCTGATGATGGTAAGAAAAAACGTATCATTAAACCAGTTAGAGAAAAAATTGGGGA
TTATACTTCTGTAGGTACACGTAAACAGCCAAACTTAGAGGAAATTAGTAAATTAAAACCGGATTTAATTATCGCTGATA
GCAGTAGACATAAAGGTATTAATAAAGAATTAAACAAAATTGCACCAACATTATCATTAAAGAGTTTTGATGGAGACTAC
AAACAAAACATTAATTCGTTCAAAACAATTGCTAAAGCTTTAAATAAAGAAAAAGAAGGCGAAAAGCGTCTTGCTGAACA
TGATAAATTAATCAAAAAGTATAAAGATGAAATTAAGTTTGATAGAAATCAAAAAGTGCTTCCAGCAGTTGTTGCTAAAG
CTGGTTTATTAGCACATCCAAACTATTCATATGTTGGACAATTTTTAAACGAACTTGGATTTAAAAATGCATTAAGTGAT
GATGTAACAAAAGGTTTAAGTAAATACTTGAAAGGACCTTACTTACAATTAGATACTGAACATTTAGCTGACTTAAATCC
TGAACGCATGATTATTATGACAGATAATGCTAAAAAAGATTCTGCTGAATTCAAGAAGTTACAAGAAGATCCAACTTGGA
AAAAGTTGAATGCAGTTAAAAATAATCGCGTGGATATTGTTGACCGTGATGTTTGGGCAAGATCTCGTGGCTTAATTTCT
TCTGAAGAAATGGCTAAAGAACTTGTTGAATTATCAAAAAAAGAACAAAAGTAA

Upstream 100 bases:

>100_bases
GTCATAATTATTAGAGGGAATATATATAGTCATACATTTCAGTAATATAAAAAGATTGAATACTACTTGACAATGATAAT
TGTTATCAATAAAATAATAA

Downstream 100 bases:

>100_bases
GGTGGAAGTAAATGGCTATAAAAGAAATAAGTAGCCAATCTGCCATAGATCATAAAAGAAAAAGACGCACAACACTCACG
TATATAGTGAGTTTGTGCTT

Product: ferrichrome ABC transporter lipoprotein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: Ferric-citrate-binding protein [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKLYILRSGTMRGLKTFSILGLIVALFLVAACGNTDNSSKKESSTKDTISVKDENGTVKVPKDAKRIVVLEYSFADALAA
LDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDY
KQNINSFKTIAKALNKEKEGEKRLAEHDKLIKKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSD
DVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDNAKKDSAEFKKLQEDPTWKKLNAVKNNRVDIVDRDVWARSRGLIS
SEEMAKELVELSKKEQK

Sequences:

>Translated_337_residues
MKLYILRSGTMRGLKTFSILGLIVALFLVAACGNTDNSSKKESSTKDTISVKDENGTVKVPKDAKRIVVLEYSFADALAA
LDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDY
KQNINSFKTIAKALNKEKEGEKRLAEHDKLIKKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSD
DVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDNAKKDSAEFKKLQEDPTWKKLNAVKNNRVDIVDRDVWARSRGLIS
SEEMAKELVELSKKEQK
>Mature_337_residues
MKLYILRSGTMRGLKTFSILGLIVALFLVAACGNTDNSSKKESSTKDTISVKDENGTVKVPKDAKRIVVLEYSFADALAA
LDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDY
KQNINSFKTIAKALNKEKEGEKRLAEHDKLIKKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSD
DVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDNAKKDSAEFKKLQEDPTWKKLNAVKNNRVDIVDRDVWARSRGLIS
SEEMAKELVELSKKEQK

Specific function: Part of the ABC transporter complex yfmCDEF involved in citrate-dependent Fe(3+) import. Binds citrate-dependent Fe(3+) and delivers it to the surface of yfmDE (Probable) [H]

COG id: COG4594

COG function: function code P; ABC-type Fe3+-citrate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=283, Percent_Identity=36.3957597173145, Blast_Score=189, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 37806; Mature: 37806

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLYILRSGTMRGLKTFSILGLIVALFLVAACGNTDNSSKKESSTKDTISVKDENGTVKV
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEC
PKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLE
CCCCCEEEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCHH
EISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEG
HHHHCCCCEEEECCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHH
EKRLAEHDKLIKKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHH
DVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDNAKKDSAEFKKLQEDPTWKKLNAVK
HHHHHHHHHHCCCCEEECHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHC
NNRVDIVDRDVWARSRGLISSEEMAKELVELSKKEQK
CCCCEEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLYILRSGTMRGLKTFSILGLIVALFLVAACGNTDNSSKKESSTKDTISVKDENGTVKV
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEC
PKDAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLE
CCCCCEEEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCCHH
EISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKALNKEKEG
HHHHCCCCEEEECCCCCCCCHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHCCCHHH
EKRLAEHDKLIKKYKDEIKFDRNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHH
DVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDNAKKDSAEFKKLQEDPTWKKLNAVK
HHHHHHHHHHCCCCEEECHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHC
NNRVDIVDRDVWARSRGLISSEEMAKELVELSKKEQK
CCCCEEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]