| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is ydeN [H]
Identifier: 82751483
GI number: 82751483
Start: 1888575
End: 1889129
Strand: Reverse
Name: ydeN [H]
Synonym: SAB1762c
Alternate gene names: 82751483
Gene position: 1889129-1888575 (Counterclockwise)
Preceding gene: 82751484
Following gene: 82751477
Centisome position: 68.88
GC content: 33.87
Gene sequence:
>555_bases ATGACAGATGTAATCATTGTACATTCTATGCATGGAAATAGTAGAAATCATTGGTATCAGTGGTTGGAGCATAACTTAAC TTTAGAAGGATATGACGTAACATTATTTAATTTTGAATCCCCTGAAGCGAATACAGTGGATCAGTGGATTGAAGCTATGA CGAAACAAATTAATGTACGCAAAAAGGATACATATTTTGTAACACATGGTTTAGGTTCAATCACAGCTTTAAAATATATT GAAATGATTGATCAGCCGATTGAAGGCTTTTTCAGTATAGCGGGCTTTAAAGAAGATGCAGAAAATATAGATTTAGATAT TGATTTAAGTAATGTAACCATTGATTACGATAATATTAAAAAGAAAGTTGACAATTTTTACGGATTGAGTTCTAAAAATG ACAAATACGTTTCATATAAAGAAACCCAGCGTTTAATGAATGCATTAGAGGGGAACTTGCGAATCGTGGAAGATGGAGGG CACTTCTTAGAAGAGGATGGCTTCGAAACATTTACAGCGTTGCAAGATCGGATGCAAGATTACATGACACGATAG
Upstream 100 bases:
>100_bases ATATAACATTTCTAATTAAGGTGTTTTTATTTTACAATTATAGGTAATCATTCATTTTTTTAAATAGAAAAGAAGTAGTA AGTTGAAAGGAGAGAATGAG
Downstream 100 bases:
>100_bases GTAATGTATTGTTGTGTTATGTTGTGTCAGTAGGTAGCTGCTGATTTTGAAAAAATTGTGGTAATTATGTTTTTAACAAA ATGAAGAGACTGTCGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEANTVDQWIEAMTKQINVRKKDTYFVTHGLGSITALKYI EMIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTIDYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGG HFLEEDGFETFTALQDRMQDYMTR
Sequences:
>Translated_184_residues MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEANTVDQWIEAMTKQINVRKKDTYFVTHGLGSITALKYI EMIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTIDYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGG HFLEEDGFETFTALQDRMQDYMTR >Mature_183_residues TDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEANTVDQWIEAMTKQINVRKKDTYFVTHGLGSITALKYIE MIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTIDYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGGH FLEEDGFETFTALQDRMQDYMTR
Specific function: Unknown
COG id: COG3545
COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the RBBP9 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010662 [H]
Pfam domain/function: PF06821 DUF1234 [H]
EC number: NA
Molecular weight: Translated: 21456; Mature: 21325
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEANTVDQWIEAMTKQINVR CCCEEEEEECCCCCCHHHHHHHHHCCEEECCEEEEEECCCCCCCCHHHHHHHHHHHCCCC KKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTIDYDNIK CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECEEEEEHHHHH KKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGGHFLEEDGFETFTALQDRMQD HHHHHHCCCCCCCCCEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH YMTR HHCC >Mature Secondary Structure TDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEANTVDQWIEAMTKQINVR CCEEEEEECCCCCCHHHHHHHHHCCEEECCEEEEEECCCCCCCCHHHHHHHHHHHCCCC KKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAENIDLDIDLSNVTIDYDNIK CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECEEEEEHHHHH KKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGGHFLEEDGFETFTALQDRMQD HHHHHHCCCCCCCCCEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH YMTR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]