| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82751446
Identifier: 82751446
GI number: 82751446
Start: 1867976
End: 1869517
Strand: Reverse
Name: 82751446
Synonym: SAB1725c
Alternate gene names: NA
Gene position: 1869517-1867976 (Counterclockwise)
Preceding gene: 82751447
Following gene: 82751445
Centisome position: 68.17
GC content: 33.46
Gene sequence:
>1542_bases ATGTTAAAGGTAAATGAATTTGAAACAGATACAGATCTACGTGAAAACAGGAATTACTTATTTAATGATGAAGCTAATGT TGTTTACACATATGACGGGACGGAGTCCGATTTATTACAAAACGTTAATGAAGTGAGTAAATACATTGAACATCACATGG ATTACCAACGACCTAGATTAAAAGTGTTAAGTGATTATTACGAAGGTAAAACTAAGAACTTAGTTGAGTTAACACGACGC AAAGAAGAGTATATGTCAGACAACCGTGTTGCCCATGATTACGCATCTTATATCAGTGATTTCATTAATGGTTATTTCTT AGGTAATCCAATTCAATACCAAGATGATGACAAAGATGTATTAGAAGCTATTGAGGCGTTCAATGATTTGAATGATGTTG AGTCACACAATAGATCTCTAGGATTAGACTTATCAATTTATGGCAAAGCTTATGAGTTGATGATTAGAAACCAAGATGAT GAAACGCGTTTATACAAGAGTGATGCAATGAGTACTTTTGTCATATATGACAACACAGTTGAACGTAATAGTATTGCGGG CGTTAGATATTTAAGAACTAAACCAATAGACAAGACTGACGAAGATGAAGTGTTTACTGTTGATTTATTCACTTCACACG GTGTTTATAGATATCTTACCAGTAGAACAAGTGGATTGAAGCTCACACCACGTGAAAACGGTTTTGAATCACACTCATTT GAACGCATGCCTATTACAGAATTTAGCAACAACGAAAGAAGAAAAGGAGATTATGAAAAAGTAATCACTTTAATTGATTT GTATGATAATGCTGAATCAGATACAGCTAACTATATGAGTGATTTAAATGACGCTATGCTACTTATTAAAGGTAATTTAA ATTTAGATCCCGTAGAAGTTAGAAAGCAAAAGGAAGCTAATGTTTTGTTTTTAGAACCGACTGTTTATGCTGATAGCGAA GGTAGAGAAACAGAAGGCTCTGTTGATGGCGGTTATATTTATAAACAATACGATGTACAAGGTACAGAAGCTTATAAAGA CCGTTTAAACAGTGATATACACATGTTTACCAACACGCCTAACATGAAAGATGATAACTTTAGCGGCACGACTTCAGGTG AGGCAATGAAATACAAATTATTTGGATTAGAACAACGCACTAAAACTAAAGAAGGATTGTTTACTAAAGGGTTAAGACGT CGTGCTAAGTTGTTAGAGACAATACTTAAAAACACACGGTCAATTGACGCTAACAAAGATTTTAATACTGTTAGGTACGT ATACAATAGAAACTTACCTAAATCATTAATCGAAGAATTAAAAGCTTATATTGATTCTGGCGGGAAGATTAGTCAAACAA CTTTAATGTCTCTATTCTCGTTCTTCCAAGACCCTGAATTGGAAGTCAAGAAAATAGAAGAAGATGAGAAAGAATCTATT AAAAAAGCTCAAAAAGGTATTTATAAAGACCCTAGAGACATCAATGATGACGAACAAGATGATGATACAAAAGATACTGT TGATAAAAAGGAAGGATTGTAA
Upstream 100 bases:
>100_bases TATAGTCTTGAAAAATACCATATTAAATTAAAAAAACGCAAGAAGAATGCAGAAAGCAAAACAAAAGTAATCAAATCTCT AGGATTATAGGAGGGAACAA
Downstream 100 bases:
>100_bases TTGCCTAACAAAAACACTCAAGAATATTGGGAAGAACGCGGACGCAAAGCAATCGAGAATGAGTTGAAGCGTGATAAAAC TAAAGCTGAAGAAATAGAAC
Product: phage-like protein
Products: NA
Alternate protein names: Portal Protein; Phage Portal Protein SPP1 Gp6-Like; SPP1 Family Phage Portal Protein; Phage Portal Protein SPP1 Family; Phage Protein; Phage Related Protein; Phage-Like Protein; Bacteriophage Portal Protein; Prophage Lp1 Protein; Phage-Related Portal Protein
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MLKVNEFETDTDLRENRNYLFNDEANVVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRR KEEYMSDNRVAHDYASYISDFINGYFLGNPIQYQDDDKDVLEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDD ETRLYKSDAMSTFVIYDNTVERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTSGLKLTPRENGFESHSF ERMPITEFSNNERRKGDYEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSE GRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTTSGEAMKYKLFGLEQRTKTKEGLFTKGLRR RAKLLETILKNTRSIDANKDFNTVRYVYNRNLPKSLIEELKAYIDSGGKISQTTLMSLFSFFQDPELEVKKIEEDEKESI KKAQKGIYKDPRDINDDEQDDDTKDTVDKKEGL
Sequences:
>Translated_513_residues MLKVNEFETDTDLRENRNYLFNDEANVVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRR KEEYMSDNRVAHDYASYISDFINGYFLGNPIQYQDDDKDVLEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDD ETRLYKSDAMSTFVIYDNTVERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTSGLKLTPRENGFESHSF ERMPITEFSNNERRKGDYEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSE GRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTTSGEAMKYKLFGLEQRTKTKEGLFTKGLRR RAKLLETILKNTRSIDANKDFNTVRYVYNRNLPKSLIEELKAYIDSGGKISQTTLMSLFSFFQDPELEVKKIEEDEKESI KKAQKGIYKDPRDINDDEQDDDTKDTVDKKEGL >Mature_513_residues MLKVNEFETDTDLRENRNYLFNDEANVVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRLKVLSDYYEGKTKNLVELTRR KEEYMSDNRVAHDYASYISDFINGYFLGNPIQYQDDDKDVLEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDD ETRLYKSDAMSTFVIYDNTVERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTSGLKLTPRENGFESHSF ERMPITEFSNNERRKGDYEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEVRKQKEANVLFLEPTVYADSE GRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIHMFTNTPNMKDDNFSGTTSGEAMKYKLFGLEQRTKTKEGLFTKGLRR RAKLLETILKNTRSIDANKDFNTVRYVYNRNLPKSLIEELKAYIDSGGKISQTTLMSLFSFFQDPELEVKKIEEDEKESI KKAQKGIYKDPRDINDDEQDDDTKDTVDKKEGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59640; Mature: 59640
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVNEFETDTDLRENRNYLFNDEANVVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRL CCCCCCCCCCCCHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHH KVLSDYYEGKTKNLVELTRRKEEYMSDNRVAHDYASYISDFINGYFLGNPIQYQDDDKDV HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCHHH LEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDETRLYKSDAMSTFVIYDNTV HHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHCCCEEEEEECCCC ERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTSGLKLTPRENGFESHSF CCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCEECCCCCCCCCCCC ERMPITEFSNNERRKGDYEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEV CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHH RKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIHMFTNTP HHCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEEEEECCC NMKDDNFSGTTSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKD CCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FNTVRYVYNRNLPKSLIEELKAYIDSGGKISQTTLMSLFSFFQDPELEVKKIEEDEKESI CCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHH KKAQKGIYKDPRDINDDEQDDDTKDTVDKKEGL HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MLKVNEFETDTDLRENRNYLFNDEANVVYTYDGTESDLLQNVNEVSKYIEHHMDYQRPRL CCCCCCCCCCCCHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHH KVLSDYYEGKTKNLVELTRRKEEYMSDNRVAHDYASYISDFINGYFLGNPIQYQDDDKDV HHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEECCCCCCCCCCCHHH LEAIEAFNDLNDVESHNRSLGLDLSIYGKAYELMIRNQDDETRLYKSDAMSTFVIYDNTV HHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHCCCEEEEEECCCC ERNSIAGVRYLRTKPIDKTDEDEVFTVDLFTSHGVYRYLTSRTSGLKLTPRENGFESHSF CCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCCCEECCCCCCCCCCCC ERMPITEFSNNERRKGDYEKVITLIDLYDNAESDTANYMSDLNDAMLLIKGNLNLDPVEV CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHH RKQKEANVLFLEPTVYADSEGRETEGSVDGGYIYKQYDVQGTEAYKDRLNSDIHMFTNTP HHCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCEEEEECCC NMKDDNFSGTTSGEAMKYKLFGLEQRTKTKEGLFTKGLRRRAKLLETILKNTRSIDANKD CCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC FNTVRYVYNRNLPKSLIEELKAYIDSGGKISQTTLMSLFSFFQDPELEVKKIEEDEKESI CCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHH KKAQKGIYKDPRDINDDEQDDDTKDTVDKKEGL HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA