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The map label for this gene is xtmB [H]

Identifier: 82751447

GI number: 82751447

Start: 1869528

End: 1870817

Strand: Reverse

Name: xtmB [H]

Synonym: SAB1726c

Alternate gene names: 82751447

Gene position: 1870817-1869528 (Counterclockwise)

Preceding gene: 82751448

Following gene: 82751446

Centisome position: 68.21

GC content: 33.72

Gene sequence:

>1290_bases
ATGTATGAAATACTTGATCTAAAAAATAAAATCGGTGGTGGCTATAATAAGTTTTGGCACAATAAAAGTTTTTACCGTGT
CGTTAAAGGTTCGAGGGGTAGCAAGAAAAGTAAAACTACCGCTATTAATTTTATTTATCGAATAATGAAATATGATTGGG
CAAATATACTTGTGGTCAGAAGATTCAGTAATACTAACAAACAATCAACATATACAGATTTAAAGTGGGCAACTAACCAA
TTAGGTGTTGCTCACTTATTTAAATTTAACGAAAGTTTGCCGGAAATAACGTATAAACCTACTGGACAAAAAATACTGTT
TAGAGGTTTAGACGATCCATTGAAAATAACATCGATTACTGTTGATACCGGCATTTTGTGTTGGGCTTGGTTTGAAGAAG
CTTATCAAATAGAAACATTCGCTAAATTTAGTACTGTTGTTGAGTCGATACGTGGTAGCTACGATAGTCCAGATTTCTTC
AAACAAATCACAGTTACTTTTAACCCGTGGTCGGAAAGACATTGGTTGAAATCTACGTTTTTTGACGAAGAAACAAAACT
AAACAATACCTTCTCAGATACCACAACTTATAGAGTTAATGAATGGCTAGATAAAGTCGATATTGAACGATACGAAGATT
TGTATATAAAGAATCCCAGACGTGCAAGAATCGTCTGTGATGGAGATTGGGGCGTTGCTGAGGGTCTTGTGTTCGATAAC
TTTAAAGTCACTGATTTCGATTGGCGAGAGAAGTTTAAACGAACACAAGAAATTGCACATGGTATGGATTTTGGTTTTAC
ATTTGACCCTACCACTCTAATTAACACTGTAGTTGATTTAAAAAATAAAGAGTTATGGATATACGACGAACACTCAGAAA
AAGCCATGTTGACAGATGACATTATAAATATGATTAAACGTAAAGGTTATCAAGATGCACATATAGTTGCGGATAGCGCT
GAAAAAAGGTTGATAACTGAAATAAGTAGAAAAGGTGTACCTAATATCAAACCGTCAGTAAAAGGTGCGAATACCATAAT
GCAGGGTGTCCAATTTATTCAGGGTTTTAAAGTGTATGTACACCCTAGTTGCGTACATACTATCGAAGAATTAAACACAT
ATACTTTTGACCAAGACAGTGAAGGTAATTGGATTAACAAGCCTATAGATAAAAACAATCATTTAATGGATGCACTTAGA
TATAGTCTTGAAAAATACCATATTAAATTAAAAAAACGCAAGAAGAATGCAGAAAGCAAAACAAAAGTAATCAAATCTCT
AGGATTATAG

Upstream 100 bases:

>100_bases
TAGAGATGTTAGGTAGACATCATAAATTATTTACAGACAAACAAGAGGTCGACTACAAAATACCAATGTTTGTCGATAAT
ATTCCGGAAGATGATTAGTC

Downstream 100 bases:

>100_bases
GAGGGAACAAATGTTAAAGGTAAATGAATTTGAAACAGATACAGATCTACGTGAAAACAGGAATTACTTATTTAATGATG
AAGCTAATGTTGTTTACACA

Product: phage-associated terminase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MYEILDLKNKIGGGYNKFWHNKSFYRVVKGSRGSKKSKTTAINFIYRIMKYDWANILVVRRFSNTNKQSTYTDLKWATNQ
LGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSITVDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPDFF
KQITVTFNPWSERHWLKSTFFDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
FKVTDFDWREKFKRTQEIAHGMDFGFTFDPTTLINTVVDLKNKELWIYDEHSEKAMLTDDIINMIKRKGYQDAHIVADSA
EKRLITEISRKGVPNIKPSVKGANTIMQGVQFIQGFKVYVHPSCVHTIEELNTYTFDQDSEGNWINKPIDKNNHLMDALR
YSLEKYHIKLKKRKKNAESKTKVIKSLGL

Sequences:

>Translated_429_residues
MYEILDLKNKIGGGYNKFWHNKSFYRVVKGSRGSKKSKTTAINFIYRIMKYDWANILVVRRFSNTNKQSTYTDLKWATNQ
LGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSITVDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPDFF
KQITVTFNPWSERHWLKSTFFDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
FKVTDFDWREKFKRTQEIAHGMDFGFTFDPTTLINTVVDLKNKELWIYDEHSEKAMLTDDIINMIKRKGYQDAHIVADSA
EKRLITEISRKGVPNIKPSVKGANTIMQGVQFIQGFKVYVHPSCVHTIEELNTYTFDQDSEGNWINKPIDKNNHLMDALR
YSLEKYHIKLKKRKKNAESKTKVIKSLGL
>Mature_429_residues
MYEILDLKNKIGGGYNKFWHNKSFYRVVKGSRGSKKSKTTAINFIYRIMKYDWANILVVRRFSNTNKQSTYTDLKWATNQ
LGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSITVDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPDFF
KQITVTFNPWSERHWLKSTFFDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
FKVTDFDWREKFKRTQEIAHGMDFGFTFDPTTLINTVVDLKNKELWIYDEHSEKAMLTDDIINMIKRKGYQDAHIVADSA
EKRLITEISRKGVPNIKPSVKGANTIMQGVQFIQGFKVYVHPSCVHTIEELNTYTFDQDSEGNWINKPIDKNNHLMDALR
YSLEKYHIKLKKRKKNAESKTKVIKSLGL

Specific function: Functions as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaT and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 50247; Mature: 50247

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEILDLKNKIGGGYNKFWHNKSFYRVVKGSRGSKKSKTTAINFIYRIMKYDWANILVVR
CCCHHHHHHHHCCCHHHHHCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
RFSNTNKQSTYTDLKWATNQLGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSIT
ECCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCCEEEEECCCCCEEEEEEE
VDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPDFFKQITVTFNPWSERHWLKSTF
ECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCHHHHHHHH
FDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
CCCHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCEEECC
FKVTDFDWREKFKRTQEIAHGMDFGFTFDPTTLINTVVDLKNKELWIYDEHSEKAMLTDD
EEECCCHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
IINMIKRKGYQDAHIVADSAEKRLITEISRKGVPNIKPSVKGANTIMQGVQFIQGFKVYV
HHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
HPSCVHTIEELNTYTFDQDSEGNWINKPIDKNNHLMDALRYSLEKYHIKLKKRKKNAESK
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TKVIKSLGL
HHHHHHHCC
>Mature Secondary Structure
MYEILDLKNKIGGGYNKFWHNKSFYRVVKGSRGSKKSKTTAINFIYRIMKYDWANILVVR
CCCHHHHHHHHCCCHHHHHCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
RFSNTNKQSTYTDLKWATNQLGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSIT
ECCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCCEEEEECCCCCEEEEEEE
VDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPDFFKQITVTFNPWSERHWLKSTF
ECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCHHHHHHHH
FDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
CCCHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCCCEEECC
FKVTDFDWREKFKRTQEIAHGMDFGFTFDPTTLINTVVDLKNKELWIYDEHSEKAMLTDD
EEECCCHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
IINMIKRKGYQDAHIVADSAEKRLITEISRKGVPNIKPSVKGANTIMQGVQFIQGFKVYV
HHHHHHHCCCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEE
HPSCVHTIEELNTYTFDQDSEGNWINKPIDKNNHLMDALRYSLEKYHIKLKKRKKNAESK
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TKVIKSLGL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 8083174 [H]