| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is isdH [H]
Identifier: 82751320
GI number: 82751320
Start: 1725040
End: 1725816
Strand: Reverse
Name: isdH [H]
Synonym: SAB1591c
Alternate gene names: 82751320
Gene position: 1725816-1725040 (Counterclockwise)
Preceding gene: 82751321
Following gene: 82751319
Centisome position: 62.93
GC content: 33.59
Gene sequence:
>777_bases ATGAACAAACATCACCCAAAATTAAGGTCTTTCTATTCTATTAGAAAATCAACTCTAGGCGTTGCATCGGTCATTGTCAG TACACTATTTTTAATTACTTCTCAACATCAAGCGCAAGCAGCAGAAAATACAAATACTTCAGATAAAATCTCGGAAAATC AAAATAGTAATGCAACTACAACTCAGCCACCAAAGGATACAAATCAAACACAACCTGCTACGCAACCAGCAAATACTGCG AAAACCTATCCTGCAGCGGATGAATCACTTAAAGATGCAATTAAAAATCCTGCAGTAGAAAATAAAGAACATGACATAGG TCCAAGAGAACAAGTTAATTTTCTATTATTAGATAAAAACAATGAAACGCAGTACTATCACTTTTTCAGTATCAAAGATC CAGCAGATGTATATTACACTAAAAAGAAAGCAGAGGTTGAATTAGATATAAACACTGCTTCAACATGGAAAAAGTTTGAA GTATATGAAAACAATCAAAAATTGCCAGTGAGACTTGTATCGTATAGTCCTGTTCCAGAAGACCATGCCTATATTCGATT CCCTGTTTCAGATGGTACGCAAGAGCTGAAAATTGTTTCTTCGACTCAAATTGATGATGGAGCTGAAACAAATTATGATT ATACTAAATTAGTATTTGCTAAACCTATATATAATGATCCTTCACTCGTGAAATCAGATACAAATGATGCAGTAGCAACG AATGATCAATCAAGTTCAGATGCAAGTAATCAAACAAATACGAATACATCTAATTAA
Upstream 100 bases:
>100_bases AGGTTGCAATATTTAATTGGGATGCGCTACAATTAACACTAATAATTGATATTGATAATTATTATCAATTAAATACTATC TTATAGGAGTTGTTAACAAC
Downstream 100 bases:
>100_bases AATACATCAACGACGAACAATACTAGTGATCAACCGCAGGCAACGACCAATATGAGTCAACCTGCACAACCAAAATTGTC AGCGAATGCAGATCAAGCGT
Product: surface-anchored iron-regulated surface protein
Products: NA
Alternate protein names: Haptoglobin receptor A; Staphylococcus aureus surface protein I [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNSNATTTQPPKDTNQTQPATQPANTA KTYPAADESLKDAIKNPAVENKEHDIGPREQVNFLLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFE VYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGAETNYDYTKLVFAKPIYNDPSLVKSDTNDAVAT NDQSSSDASNQTNTNTSN
Sequences:
>Translated_258_residues MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNSNATTTQPPKDTNQTQPATQPANTA KTYPAADESLKDAIKNPAVENKEHDIGPREQVNFLLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFE VYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGAETNYDYTKLVFAKPIYNDPSLVKSDTNDAVAT NDQSSSDASNQTNTNTSN >Mature_258_residues MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNSNATTTQPPKDTNQTQPATQPANTA KTYPAADESLKDAIKNPAVENKEHDIGPREQVNFLLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFE VYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGAETNYDYTKLVFAKPIYNDPSLVKSDTNDAVAT NDQSSSDASNQTNTNTSN
Specific function: Binds human plasma haptoglobin-hemoglobin complexes, haptoglobin and hemoglobin. Binds haptoglobin-hemoglobin complexes with significantly higher affinity than haptoglobin alone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 NEAT domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005877 - InterPro: IPR019930 - InterPro: IPR019931 - InterPro: IPR006635 [H]
Pfam domain/function: PF05031 NEAT; PF04650 YSIRK_signal [H]
EC number: NA
Molecular weight: Translated: 28846; Mature: 28846
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS50978 NEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNSNATT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCCCCCCCC TQPPKDTNQTQPATQPANTAKTYPAADESLKDAIKNPAVENKEHDIGPREQVNFLLLDKN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECC NETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPE CCCEEEEEEEECCCCCEEEECCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCC DHAYIRFPVSDGTQELKIVSSTQIDDGAETNYDYTKLVFAKPIYNDPSLVKSDTNDAVAT CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCEEC NDQSSSDASNQTNTNTSN CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNSNATT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHCCCCCCCCCC TQPPKDTNQTQPATQPANTAKTYPAADESLKDAIKNPAVENKEHDIGPREQVNFLLLDKN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECC NETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPE CCCEEEEEEEECCCCCEEEECCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCC DHAYIRFPVSDGTQELKIVSSTQIDDGAETNYDYTKLVFAKPIYNDPSLVKSDTNDAVAT CCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEECCCCCCEEC NDQSSSDASNQTNTNTSN CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA