Definition Staphylococcus aureus RF122, complete genome.
Accession NC_007622
Length 2,742,531

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The map label for this gene is isdH [H]

Identifier: 82751319

GI number: 82751319

Start: 1723135

End: 1724988

Strand: Reverse

Name: isdH [H]

Synonym: SAB1590c

Alternate gene names: 82751319

Gene position: 1724988-1723135 (Counterclockwise)

Preceding gene: 82751320

Following gene: 82751318

Centisome position: 62.9

GC content: 33.5

Gene sequence:

>1854_bases
ATGAGTCAACCTGCACAACCAAAATTGTCAGCGAATGCAGATCAAGCGTCAAGCCAACCAGCTCATGAAACAAATTCTAA
TGGTAATACTAACGATAAAACGAATGAGTCAAGTAATCAGTCGGATGTTAATCAACAGTATCCACCAGCAGATGAATCAC
TACAAGATGCAATTAAAAACCCGGCTATCATCGATAAAGAACATACAGCTGATAATTGGCGACCAATTGATTTTCAAATG
AAAAATGATAAAGGTGAAAGACAGTTCTATCATTATGCTAGTACTGTTGAACCAGCAACTGTCATTTTTACAAAAACAGG
ACCAATAATTGAATTAGGTTTAAAGACAGCTTTAACATGGAAGAAATTAGAAGTCTATGAAGGTGACAAAAAGTTACCAG
TCGAATTAGTATCATATGATTCTGATAAAGATTATGCCTATATTCGTTTCCCAGTATCTAATGGTACGAGAGAAGTTAAA
ATTGTGTCATCTATTGAATATGGTGAGAACATCCATGAAGACTATGATTATACGCTAATGGTCTTTGCACAGCCTATTAC
TAATAACCCAGACGACTATGTGGATGAGGAAACATACAATTTACAAAAATTATTAGCTCCGTATCACAAAGCTAAAACGT
TAGAAAGACAAGTTTATGAATTAGAAAAATTACAAGAGAAATTGCCAGAAAAATATAAGGCGGAATATAAAAAGAAATTA
GATCAAACTAGAGTAGAGTTAGCTGATCAAGTTAAATCAGCAGTAACGGAATTTGAAAATGTTACACCTACAAATGATCA
ATTAACAGATGTACAAGAGGCTCATTTTGTTGTTTTTGAAAGTGAAGAAAATAACGAGTCAGTTATGGACGGATTTGTTG
AACATCCATTCTATACAGCAACTTTAAATGGTCAAAAATATGTAGTGATGAAAACAAAGGATGACAGTTACTGGAAAGAT
TTAATTGTAGAAGGTAAACGTGTCACAACTGTTTCTAAAGATACTAAAAATAATTCTAGAACGCTGATTTTCCCATATAT
ACCTGACAAAGCAGTTTACAATGCGATTGTTAAAGTAGTTGTGGCAAACATTGGTTATGAAGGTCAATATCATGTCAGAA
TTATAAATCAGGATATCAAGACAAAAGATGATGACACATCACAAAATAACACGAGTGAACATTTAAATGGGCAAACAGTG
CAAGAAGATAATGTTACTGCAACGGATACAGCTACAAATAACAGTATTGAAACAACTCCAAGGGAGGCAACTGATAAAGT
AGATTTGATAGAACCAGAGTCTGACATGGTTAAAGATGCTGATAGTAGTGTTGACAAAGATGCGCATCATGATGTTGATC
ATTTATCCGATATGTCGGGTAACACTCACTTCGATAAGTATGATCTTAAAGAAATGGATACTCAAATTGCTAAAGACACT
GATAAGGGTGTTGATAATAGCGTTGGAATGTCATCTAATGTCGATACTGATAAAGACTCTAATAAAAATAAAGACAAAGT
CATACAGCTGGATCATATTGCCGATAAAAATAAAGTTAATAATACTGGAACTGAAACAAACATTGATACAATGAAATATC
ATCCTATCAGTACTATCAAAGTTACTGACAAAAAAACAACTGAACATCTGCCGAGTGATATTCATAAAACTGTAGACAAA
ACAGTGAAAACAAAAGAAAAGGCCAGCACACCATCGAAAGAAAACAAACTTAGTCAATCTAAAATGCTACCAAAAACTGG
AGAAACAACTTCAAGCCAATCATGGTGGAGCTTATATGCGTTACTAGGTATGTTAGCTTTATTCATTCCTAAATTCAGAA
AAGAATCTAAATAA

Upstream 100 bases:

>100_bases
ATCAAGTTCAGATGCAAGTAATCAAACAAATACGAATACATCTAATTAAAATACATCAACGACGAACAATACTAGTGATC
AACCGCAGGCAACGACCAAT

Downstream 100 bases:

>100_bases
TTAACTGGATATAGCATATGTATGATTAACTTTGTAGACAATGTGAAAGCAATTAAATTATAAACTATTGATTGGTTTAA
TGGCTTTCCTTTAGAGTATT

Product: iron-regulated surface protein

Products: NA

Alternate protein names: Haptoglobin receptor A; Staphylococcus aureus surface protein I [H]

Number of amino acids: Translated: 617; Mature: 616

Protein sequence:

>617_residues
MSQPAQPKLSANADQASSQPAHETNSNGNTNDKTNESSNQSDVNQQYPPADESLQDAIKNPAIIDKEHTADNWRPIDFQM
KNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKTALTWKKLEVYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVK
IVSSIEYGENIHEDYDYTLMVFAQPITNNPDDYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKL
DQTRVELADQVKSAVTEFENVTPTNDQLTDVQEAHFVVFESEENNESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKD
LIVEGKRVTTVSKDTKNNSRTLIFPYIPDKAVYNAIVKVVVANIGYEGQYHVRIINQDIKTKDDDTSQNNTSEHLNGQTV
QEDNVTATDTATNNSIETTPREATDKVDLIEPESDMVKDADSSVDKDAHHDVDHLSDMSGNTHFDKYDLKEMDTQIAKDT
DKGVDNSVGMSSNVDTDKDSNKNKDKVIQLDHIADKNKVNNTGTETNIDTMKYHPISTIKVTDKKTTEHLPSDIHKTVDK
TVKTKEKASTPSKENKLSQSKMLPKTGETTSSQSWWSLYALLGMLALFIPKFRKESK

Sequences:

>Translated_617_residues
MSQPAQPKLSANADQASSQPAHETNSNGNTNDKTNESSNQSDVNQQYPPADESLQDAIKNPAIIDKEHTADNWRPIDFQM
KNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKTALTWKKLEVYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVK
IVSSIEYGENIHEDYDYTLMVFAQPITNNPDDYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKL
DQTRVELADQVKSAVTEFENVTPTNDQLTDVQEAHFVVFESEENNESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKD
LIVEGKRVTTVSKDTKNNSRTLIFPYIPDKAVYNAIVKVVVANIGYEGQYHVRIINQDIKTKDDDTSQNNTSEHLNGQTV
QEDNVTATDTATNNSIETTPREATDKVDLIEPESDMVKDADSSVDKDAHHDVDHLSDMSGNTHFDKYDLKEMDTQIAKDT
DKGVDNSVGMSSNVDTDKDSNKNKDKVIQLDHIADKNKVNNTGTETNIDTMKYHPISTIKVTDKKTTEHLPSDIHKTVDK
TVKTKEKASTPSKENKLSQSKMLPKTGETTSSQSWWSLYALLGMLALFIPKFRKESK
>Mature_616_residues
SQPAQPKLSANADQASSQPAHETNSNGNTNDKTNESSNQSDVNQQYPPADESLQDAIKNPAIIDKEHTADNWRPIDFQMK
NDKGERQFYHYASTVEPATVIFTKTGPIIELGLKTALTWKKLEVYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVKI
VSSIEYGENIHEDYDYTLMVFAQPITNNPDDYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKLD
QTRVELADQVKSAVTEFENVTPTNDQLTDVQEAHFVVFESEENNESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDL
IVEGKRVTTVSKDTKNNSRTLIFPYIPDKAVYNAIVKVVVANIGYEGQYHVRIINQDIKTKDDDTSQNNTSEHLNGQTVQ
EDNVTATDTATNNSIETTPREATDKVDLIEPESDMVKDADSSVDKDAHHDVDHLSDMSGNTHFDKYDLKEMDTQIAKDTD
KGVDNSVGMSSNVDTDKDSNKNKDKVIQLDHIADKNKVNNTGTETNIDTMKYHPISTIKVTDKKTTEHLPSDIHKTVDKT
VKTKEKASTPSKENKLSQSKMLPKTGETTSSQSWWSLYALLGMLALFIPKFRKESK

Specific function: Binds human plasma haptoglobin-hemoglobin complexes, haptoglobin and hemoglobin. Binds haptoglobin-hemoglobin complexes with significantly higher affinity than haptoglobin alone [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 NEAT domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005877
- InterPro:   IPR019930
- InterPro:   IPR019931
- InterPro:   IPR006635 [H]

Pfam domain/function: PF05031 NEAT; PF04650 YSIRK_signal [H]

EC number: NA

Molecular weight: Translated: 69968; Mature: 69837

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50978 NEAT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPAQPKLSANADQASSQPAHETNSNGNTNDKTNESSNQSDVNQQYPPADESLQDAIKN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
PAIIDKEHTADNWRPIDFQMKNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKTALTW
CCEECCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCEEEECHHHHHEE
KKLEVYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVKIVSSIEYGENIHEDYDYTLM
EEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECHHCCCCCCCCCEEEE
VFAQPITNNPDDYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKL
EEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
DQTRVELADQVKSAVTEFENVTPTNDQLTDVQEAHFVVFESEENNESVMDGFVEHPFYTA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHCCEEEE
TLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDTKNNSRTLIFPYIPDKAVYNAIVKVV
EECCCEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHH
VANIGYEGQYHVRIINQDIKTKDDDTSQNNTSEHLNGQTVQEDNVTATDTATNNSIETTP
HHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCEECCCCCEEECCCCCCCCCCCC
REATDKVDLIEPESDMVKDADSSVDKDAHHDVDHLSDMSGNTHFDKYDLKEMDTQIAKDT
CCCCCCCEEECCCHHHHHCCCCCCCCCHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
DKGVDNSVGMSSNVDTDKDSNKNKDKVIQLDHIADKNKVNNTGTETNIDTMKYHPISTIK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCCCCCCCCCCCCCCCEEEECCCEEEE
VTDKKTTEHLPSDIHKTVDKTVKTKEKASTPSKENKLSQSKMLPKTGETTSSQSWWSLYA
ECCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LLGMLALFIPKFRKESK
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQPAQPKLSANADQASSQPAHETNSNGNTNDKTNESSNQSDVNQQYPPADESLQDAIKN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
PAIIDKEHTADNWRPIDFQMKNDKGERQFYHYASTVEPATVIFTKTGPIIELGLKTALTW
CCEECCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCEEEECHHHHHEE
KKLEVYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTREVKIVSSIEYGENIHEDYDYTLM
EEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEEECHHCCCCCCCCCEEEE
VFAQPITNNPDDYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKL
EEEECCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
DQTRVELADQVKSAVTEFENVTPTNDQLTDVQEAHFVVFESEENNESVMDGFVEHPFYTA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEEECCCCCHHHHHHHHHCCEEEE
TLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDTKNNSRTLIFPYIPDKAVYNAIVKVV
EECCCEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHH
VANIGYEGQYHVRIINQDIKTKDDDTSQNNTSEHLNGQTVQEDNVTATDTATNNSIETTP
HHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCEECCCCCEEECCCCCCCCCCCC
REATDKVDLIEPESDMVKDADSSVDKDAHHDVDHLSDMSGNTHFDKYDLKEMDTQIAKDT
CCCCCCCEEECCCHHHHHCCCCCCCCCHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
DKGVDNSVGMSSNVDTDKDSNKNKDKVIQLDHIADKNKVNNTGTETNIDTMKYHPISTIK
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCCCCCCCCCCCCCCCEEEECCCEEEE
VTDKKTTEHLPSDIHKTVDKTVKTKEKASTPSKENKLSQSKMLPKTGETTSSQSWWSLYA
ECCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LLGMLALFIPKFRKESK
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA