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The map label for this gene is alr

Identifier: 82750990

GI number: 82750990

Start: 1370180

End: 1371265

Strand: Direct

Name: alr

Synonym: SAB1254

Alternate gene names: 82750990

Gene position: 1370180-1371265 (Clockwise)

Preceding gene: 82750989

Following gene: 82750991

Centisome position: 49.96

GC content: 33.98

Gene sequence:

>1086_bases
TTGACAGCAACATGGTCTGTAAATAAGAAAATATTTTTACAAAATGCAATCACAGTCAAAAACAATCAGCCATTAATGGC
AGTTGTTAAAAATAATGCATATCACTATGACCTAGAATTTGCTGTAACTCAGTTTATCCATGCAGGTATAGATACATTTA
GCACAACATCACTACGAGAAGCAATTCAAATTAGACAACTTGCTCCAGATGCAACAATCTTTTTAATGAATGCAGTTTAC
GAGTTTGATTTAGTCCGTGAACATCAAATACACATGACTTTGCCGTCGTTGACATATTACTATAACCATAAAAATGATTT
AGCTGGTATTCATGTTCACTTAGAATTTGAAAATTTATTACATCGGTCTGGATTTAAAGATTTAAACGAAATTAAAGAAG
TATTGAAAGATCACCATCAAAATCAAAATGCAAAAATGATTATTAGTGGTTTATGGACCCATTTTGGATATGCTGATGAA
TTCGATGTGTCAGATTATAATGTTGAACGTTCACAATGGATGGAAATTGTTGAAGCACTTTTATCTGAAGGTTATCAGTT
CGACCTAATCCATGCTCAAAATAGTGCGAGTTTTTATCGGGAAGGACAAATATTACTACCCCACCATACACATGCGCGTG
TAGGTATTGCGTTATACGGTTCAAGACCATATAGTTCACTGAATCAACATGATATAGTTCAGTCATTAACTGTAAAAGCA
CATGTTATTCAAGTGCGCGAAGTACAAGCGGGTGATTATTGCGGTTATAGCTTTGCCTTTGAAGTGACTAAAGACAATAC
AAAATTAGCTGTAGTAGATATCGGTTATGGCGATGGTATTTTAAGAACTCGTGCTAAACATGAAGCACTTATCAATGGTA
AACGCTACCCGATACGTGCATTAATGATGAGCCATATGTTTGTTGAAGTAGATGGCAATGTACATGCACAAGATGAAGTT
ATTCTTTATAATAATGATATCCGCATCGATGAATATACCTTTAAAGGTGTTGGTGCAAATTCTGAACAATTAAGTGCTAT
GAATCATGATTCTTTAAAAAAGGAGTACATTTCAAATGACTGTTAA

Upstream 100 bases:

>100_bases
GGTTTGCACACATCACATTTAAATTTTGATGAAAAAGTGTTAATAAACGTGGTTAATTTTTACGAAAATTTATTAAATAA
TTACAAAGAGGTGTAATACA

Downstream 100 bases:

>100_bases
ATATAATCAAAATGGCGAATTAGCAATGGATGGTATTAGTTTAAAAACGATTGCGCAAAGCTTTGGTACACCTACCATTG
TTTATGATGAACTGCAAATT

Product: alanine racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVY
EFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADE
FDVSDYNVERSQWMEIVEALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKA
HVIQVREVQAGDYCGYSFAFEVTKDNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRALMMSHMFVEVDGNVHAQDEV
ILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISNDC

Sequences:

>Translated_361_residues
MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVY
EFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADE
FDVSDYNVERSQWMEIVEALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKA
HVIQVREVQAGDYCGYSFAFEVTKDNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRALMMSHMFVEVDGNVHAQDEV
ILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISNDC
>Mature_360_residues
TATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLREAIQIRQLAPDATIFLMNAVYE
FDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLLHRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADEF
DVSDYNVERSQWMEIVEALLSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKAH
VIQVREVQAGDYCGYSFAFEVTKDNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRALMMSHMFVEVDGNVHAQDEVI
LYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISNDC

Specific function: Provides the D-alanine required for cell wall biosynthesis [H]

COG id: COG0787

COG function: function code M; Alanine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alanine racemase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000821
- InterPro:   IPR009006
- InterPro:   IPR011079
- InterPro:   IPR001608 [H]

Pfam domain/function: PF00842 Ala_racemase_C; PF01168 Ala_racemase_N [H]

EC number: =5.1.1.1 [H]

Molecular weight: Translated: 41388; Mature: 41257

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLRE
CCCEEECCCEEEEEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCHHHHHH
AIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLL
HHHHHHCCCCCEEEEEHHHHHHHHEEEEEEEEEECCEEEEECCCCCEEEEEEEEEHHHHH
HRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEAL
HHCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKA
HHCCCEEEEEEECCCCCHHHCCCEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHEE
HVIQVREVQAGDYCGYSFAFEVTKDNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRA
EEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHH
LMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISND
HHHHEEEEEECCCEECCCEEEEEECCEEEEEEEEECCCCCHHHHHHCCHHHHHHHHHCCC
C
C
>Mature Secondary Structure 
TATWSVNKKIFLQNAITVKNNQPLMAVVKNNAYHYDLEFAVTQFIHAGIDTFSTTSLRE
CCEEECCCEEEEEEEEEEECCCCEEEEEECCCEEEEHHHHHHHHHHHCCCCCCHHHHHH
AIQIRQLAPDATIFLMNAVYEFDLVREHQIHMTLPSLTYYYNHKNDLAGIHVHLEFENLL
HHHHHHCCCCCEEEEEHHHHHHHHEEEEEEEEEECCEEEEECCCCCEEEEEEEEEHHHHH
HRSGFKDLNEIKEVLKDHHQNQNAKMIISGLWTHFGYADEFDVSDYNVERSQWMEIVEAL
HHCCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
LSEGYQFDLIHAQNSASFYREGQILLPHHTHARVGIALYGSRPYSSLNQHDIVQSLTVKA
HHCCCEEEEEEECCCCCHHHCCCEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHEE
HVIQVREVQAGDYCGYSFAFEVTKDNTKLAVVDIGYGDGILRTRAKHEALINGKRYPIRA
EEEEEEEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHH
LMMSHMFVEVDGNVHAQDEVILYNNDIRIDEYTFKGVGANSEQLSAMNHDSLKKEYISND
HHHHEEEEEECCCEECCCEEEEEECCEEEEEEEEECCCCCHHHHHHCCHHHHHHHHHCCC
C
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11447207 [H]