| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is thrB
Identifier: 82750925
GI number: 82750925
Start: 1293800
End: 1294714
Strand: Direct
Name: thrB
Synonym: SAB1188
Alternate gene names: 82750925
Gene position: 1293800-1294714 (Clockwise)
Preceding gene: 82750924
Following gene: 82750926
Centisome position: 47.18
GC content: 35.96
Gene sequence:
>915_bases ATGTCGAATGTTTTGGAGTTAAAAATTCCTGCATCAACAGCCAACCTTGGAGTTGGCTTTGATTCTATAGGTATGGCTTT AGATAAATTTTTGCATCTGTCTGTAAAGGAAACATCAGGGACAAAATGGGAATATATTTTCCATGATGATGCATCGAAGC AATTGCCTACTGACGAAACAAACTTTATTTATCATGTGGCACAACAAGTTGCTGCTAAATATAGTGTTGACTTGCCTAAT TTATGTATCGAAATGAGAAGTGATATTCCATTGGCAAGAGGGTTAGGTTCGTCAGCTTCTGCTTTAGTAGGAGCTATATA TATCGCAAATTATTTTGGTGATATCCAACTATCTAAACACGAGGTATTACAATTAGCGACTGAAATCGAAGGACATCCTG ATAATGTTGCGCCGACCATTTATGGTGGTTTAATCTCTGGGTATTATAATGATGTCTCGAAAGAAACGTCAGTTGCACAT ATCGACATACCAGACGTGGATGTGATTGTAACGATACCAACTTATGAACTAAAAACAGAAGCATCAAGACGTGCTTTACC ACAAAAATTAACACATAGTGAAGCGGTTAAAAGTAGTGCAATTAGTAATACAATGATTTGTGCATTAGCACAGCACAATT ATGAATTAGCAGGTAAGCTCATGCAACAAGATGGCTTTCATGAACCGTATCGTCAGCATTTAATTGCTGAATTTGATGAA GTGAAAACAATTGCTAGTCAACATAATGCCTATGCAACAGTGATTAGTGGTGCTGGACCAACTATTTTAATATTTAGTCG TAAAGAAAATAGTGGCGAATTGGTTCGCGCTTTAAATAGAAATGTAGTTACATGTCATTCTGAATTAGTAGATATTAATG TTAGTGGTGTTAAAGAACGAATTGTATACCAATAG
Upstream 100 bases:
>100_bases AAAGATCCTGATACTGCTATTTCACTACTAGATAATCCGATAAAGCCATTGCCAAATGATAAAGATAGCATTATCGATTA TATTAAAGGAGCTTTATAAC
Downstream 100 bases:
>100_bases ACGCTTTATATTGTAAAATAGTATTGAATGTGAAATAGAGAGGAGATTTAATGCGATATGACAAATTATAAAGTTGTCGT TTTAGATATGGATGACACAT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSNVLELKIPASTANLGVGFDSIGMALDKFLHLSVKETSGTKWEYIFHDDASKQLPTDETNFIYHVAQQVAAKYSVDLPN LCIEMRSDIPLARGLGSSASALVGAIYIANYFGDIQLSKHEVLQLATEIEGHPDNVAPTIYGGLISGYYNDVSKETSVAH IDIPDVDVIVTIPTYELKTEASRRALPQKLTHSEAVKSSAISNTMICALAQHNYELAGKLMQQDGFHEPYRQHLIAEFDE VKTIASQHNAYATVISGAGPTILIFSRKENSGELVRALNRNVVTCHSELVDINVSGVKERIVYQ
Sequences:
>Translated_304_residues MSNVLELKIPASTANLGVGFDSIGMALDKFLHLSVKETSGTKWEYIFHDDASKQLPTDETNFIYHVAQQVAAKYSVDLPN LCIEMRSDIPLARGLGSSASALVGAIYIANYFGDIQLSKHEVLQLATEIEGHPDNVAPTIYGGLISGYYNDVSKETSVAH IDIPDVDVIVTIPTYELKTEASRRALPQKLTHSEAVKSSAISNTMICALAQHNYELAGKLMQQDGFHEPYRQHLIAEFDE VKTIASQHNAYATVISGAGPTILIFSRKENSGELVRALNRNVVTCHSELVDINVSGVKERIVYQ >Mature_303_residues SNVLELKIPASTANLGVGFDSIGMALDKFLHLSVKETSGTKWEYIFHDDASKQLPTDETNFIYHVAQQVAAKYSVDLPNL CIEMRSDIPLARGLGSSASALVGAIYIANYFGDIQLSKHEVLQLATEIEGHPDNVAPTIYGGLISGYYNDVSKETSVAHI DIPDVDVIVTIPTYELKTEASRRALPQKLTHSEAVKSSAISNTMICALAQHNYELAGKLMQQDGFHEPYRQHLIAEFDEV KTIASQHNAYATVISGAGPTILIFSRKENSGELVRALNRNVVTCHSELVDINVSGVKERIVYQ
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=284, Percent_Identity=27.4647887323944, Blast_Score=99, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6321814, Length=347, Percent_Identity=27.3775216138329, Blast_Score=112, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 33333; Mature: 33202
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVLELKIPASTANLGVGFDSIGMALDKFLHLSVKETSGTKWEYIFHDDASKQLPTDET CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCH NFIYHVAQQVAAKYSVDLPNLCIEMRSDIPLARGLGSSASALVGAIYIANYFGDIQLSKH HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCEEECHH EVLQLATEIEGHPDNVAPTIYGGLISGYYNDVSKETSVAHIDIPDVDVIVTIPTYELKTE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCHHHCC ASRRALPQKLTHSEAVKSSAISNTMICALAQHNYELAGKLMQQDGFHEPYRQHLIAEFDE HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHH VKTIASQHNAYATVISGAGPTILIFSRKENSGELVRALNRNVVTCHSELVDINVSGVKER HHHHHHCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCCEEEEEEEEEEEEHHHHHHH IVYQ HCCC >Mature Secondary Structure SNVLELKIPASTANLGVGFDSIGMALDKFLHLSVKETSGTKWEYIFHDDASKQLPTDET CCEEEEEECCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCH NFIYHVAQQVAAKYSVDLPNLCIEMRSDIPLARGLGSSASALVGAIYIANYFGDIQLSKH HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCEEECHH EVLQLATEIEGHPDNVAPTIYGGLISGYYNDVSKETSVAHIDIPDVDVIVTIPTYELKTE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCHHHCC ASRRALPQKLTHSEAVKSSAISNTMICALAQHNYELAGKLMQQDGFHEPYRQHLIAEFDE HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHH VKTIASQHNAYATVISGAGPTILIFSRKENSGELVRALNRNVVTCHSELVDINVSGVKER HHHHHHCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHCCCEEEEEEEEEEEEHHHHHHH IVYQ HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA