| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is yxeH [H]
Identifier: 82750926
GI number: 82750926
Start: 1294772
End: 1295575
Strand: Direct
Name: yxeH [H]
Synonym: SAB1189
Alternate gene names: 82750926
Gene position: 1294772-1295575 (Clockwise)
Preceding gene: 82750925
Following gene: 82750929
Centisome position: 47.21
GC content: 32.59
Gene sequence:
>804_bases ATGACAAATTATAAAGTTGTCGTTTTAGATATGGATGACACATTGCTAAATTCAGATAATGTGATATCAGAAGAAACTGC AAATTATTTAACAGCAATTCAAGATGAAGGTTATTATGTTGTTTTAGCATCTGGTAGACCTACTGAAGGTATGATTCCAA CTGCTAGAGATTTAAAATTACCTGAACATCATAGCTATATTATTAGTTATAACGGCAGTAAAACGATTAACATGACTAAT GAAGAAGTAGAAGTAAGTAAATCGATTGGTAAGCAGGATTTCGATGAAATTGTAGATTATTGTCGAGATAGAGGATTTTT CGTTCTTACATATCATGATGGTCAAATTATTTACGACAGCGAACATGAATATATGAATATTGAAGCGGAATTAACTGGTT TACCGATGAAACGTGTTGATGACATTAAAGCGTATATTCAAGATGATGTTCATAAGGTCATGGGTGTAGATTATGTAGCG AATATTACAGAAGCTAGAATTGATTTGAATGGTGTGTTCAATGATAATGTAGATGCTACGACAAGTAAGCCATTCTTCTT AGAATTTATGGCCAAAGATGTTTCAAAAGGTAATGCAATTAAAGCGTTATGTCACAAATTGGGATATTCGGTGGATCAAG TCATTGCTTTTGGTGATAGTATGAATGATAAATCAATGTTTGAAGTCGCAGGTCTAGCTATTGCTATGGGGAATGCATCA GATGAACTTAAGCAATATGCAGATGAAATTACGTTGGATCATAATGAAAATGGTATTCCACATGCACTTAAAAAATTGTT ATAA
Upstream 100 bases:
>100_bases TATTAATGTTAGTGGTGTTAAAGAACGAATTGTATACCAATAGACGCTTTATATTGTAAAATAGTATTGAATGTGAAATA GAGAGGAGATTTAATGCGAT
Downstream 100 bases:
>100_bases GTTTTAAAATAAGCCTAATTACAGGATATTTGAATAAGATTGAAATGCTCCCTTCAAAGTAGACATTGAAAAAATGAAAG CTTTGAAGGGAGCTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKLPEHHSYIISYNGSKTINMTN EEVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDSEHEYMNIEAELTGLPMKRVDDIKAYIQDDVHKVMGVDYVA NITEARIDLNGVFNDNVDATTSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNAS DELKQYADEITLDHNENGIPHALKKLL
Sequences:
>Translated_267_residues MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKLPEHHSYIISYNGSKTINMTN EEVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDSEHEYMNIEAELTGLPMKRVDDIKAYIQDDVHKVMGVDYVA NITEARIDLNGVFNDNVDATTSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNAS DELKQYADEITLDHNENGIPHALKKLL >Mature_266_residues TNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKLPEHHSYIISYNGSKTINMTNE EVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDSEHEYMNIEAELTGLPMKRVDDIKAYIQDDVHKVMGVDYVAN ITEARIDLNGVFNDNVDATTSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNASD ELKQYADEITLDHNENGIPHALKKLL
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI2367265, Length=266, Percent_Identity=28.5714285714286, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI48994981, Length=275, Percent_Identity=28, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI87081741, Length=242, Percent_Identity=24.7933884297521, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 - InterPro: IPR006380 [H]
Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]
EC number: NA
Molecular weight: Translated: 29935; Mature: 29804
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKL CCCEEEEEEECCCCCCCCCCCCHHHHHHHHEEEECCCEEEEEECCCCCCCCCCCHHHCCC PEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDS CCCCCEEEEECCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCEEEECC EHEYMNIEAELTGLPMKRVDDIKAYIQDDVHKVMGVDYVANITEARIDLNGVFNDNVDAT CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCCC TSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNAS CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHEEECCCCCCCHHHHHHHEEEEECCCH DELKQYADEITLDHNENGIPHALKKLL HHHHHHHHHEEECCCCCCHHHHHHHHC >Mature Secondary Structure TNYKVVVLDMDDTLLNSDNVISEETANYLTAIQDEGYYVVLASGRPTEGMIPTARDLKL CCEEEEEEECCCCCCCCCCCCHHHHHHHHEEEECCCEEEEEECCCCCCCCCCCHHHCCC PEHHSYIISYNGSKTINMTNEEVEVSKSIGKQDFDEIVDYCRDRGFFVLTYHDGQIIYDS CCCCCEEEEECCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCEEEECC EHEYMNIEAELTGLPMKRVDDIKAYIQDDVHKVMGVDYVANITEARIDLNGVFNDNVDAT CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEECCCCCCC TSKPFFLEFMAKDVSKGNAIKALCHKLGYSVDQVIAFGDSMNDKSMFEVAGLAIAMGNAS CCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHEEECCCCCCCHHHHHHHEEEEECCCH DELKQYADEITLDHNENGIPHALKKLL HHHHHHHHHEEECCCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]