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The map label for this gene is ynbA [H]

Identifier: 82750906

GI number: 82750906

Start: 1270825

End: 1272084

Strand: Direct

Name: ynbA [H]

Synonym: SAB1169

Alternate gene names: 82750906

Gene position: 1270825-1272084 (Clockwise)

Preceding gene: 82750902

Following gene: 82750907

Centisome position: 46.34

GC content: 31.11

Gene sequence:

>1260_bases
ATGGCTCAGCAACAAATTCATGATACTAAAAATAAACTAGAAAAAGCTGTCTTAGTCGGTGTACATGCTCAAGATGATAA
GCAATTTAATTTTGAGTCTACAATGGAGGAATTATCATCTTTATCAGAGACTTGCCAACTTGAAGTGTTGGGTCAAATTA
CTCAAAACAGAGATCGTGTAGATCGCAAATATTATGTTGGTAAAGGTAAAATTGAAGAAATTCAAGCATTTATTGAGTTC
AAAGATATTGATGTAGTCATCACAAATGATGAATTAACGACTGCACAATCCAAATCACTAAATGAAGCTTTAGGTGTAAA
AATTATTGATAGAACTCAGTTGATTCTTGAAATATTTGCATTAAGAGCAAGAAGTAAAGAAGGTAAATTGCAAGTAGAGC
TAGCACAACTTGATTATTTATTATCTAGATTGCAAGGCCATGGTAAAAGCCTTTCTCGTTTAGGTGGCGGTATTGGAACT
AGAGGCCCTGGTGAAACGAAGTTAGAGATGGATCGCAGACATATTCGAACTCGTATGAATGAAATTAAACATCAATTGCG
AACGGTAGAAGAACATCGCGAAAGATATCGAAATAAAAGAAATCAAAATCAGGTGTTTCATGTAGCTTTAGTTGGTTATA
CAAATGCTGGTAAATCATCATGGTTTAATGTTTTAGCAAATGAAGAGACATATGAAAAAAATCAATTATTTGCAACGTTA
GATCCTAAAACACGACAAATTCAAATAAATGATGGATTTAATTTAATTATTTCAGATACTGTTGGTTTTATACAGAAACT
ACCTACGACGTTAATTGTAGCTTTTAAATCAACTTTAGAAGAGGCTAAAGGTGCAGATTTATTAGTACATGTCGTAGATA
GTAGCCATCCTGAATACCGTACGCAGTATGACACAGTTAATGATTTAATCAAACAATTAGATATGAACCATATTTCTCAA
ATAGTTATTTTTAATAAAAAGGACTTATGTGATCATGCATCAAATCGTCCAGCAAGTGATTTGCCTAATGTTTTTGTTTC
TTCTAAAAATGATGGTGATAAATTACTTGTTAAGACGTTATTTATTGATGAAATCAAAAGACAATTAACTTATTATGATG
AGGCAATTGCGACGAATAATGCAGATCGATTATATTTTCTAAAACAACATACATTAGTGACTGAACTTAAATATGATGAA
ATTGAAAATGTTTATCGTATAAAAGGATTTAAAAATAATAAAAGGACGAAATTCAAATGA

Upstream 100 bases:

>100_bases
TTCGATTTACTTAAAATGTACCATAAAATCGTGTAATAGTCTTTACTAAAACTCTATGATAGAATACTTTGAGTAGGATT
TTATTAAGGAGATGTATAAC

Downstream 100 bases:

>100_bases
AAGATATAAGTAAGATAGTAGCTGACGTCGAATCAACGTTAGCACCATATTTTAAAGAAATTGAAGAAACTGCATATATT
AATCAAGAAAAAGTATTAAA

Product: GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MAQQQIHDTKNKLEKAVLVGVHAQDDKQFNFESTMEELSSLSETCQLEVLGQITQNRDRVDRKYYVGKGKIEEIQAFIEF
KDIDVVITNDELTTAQSKSLNEALGVKIIDRTQLILEIFALRARSKEGKLQVELAQLDYLLSRLQGHGKSLSRLGGGIGT
RGPGETKLEMDRRHIRTRMNEIKHQLRTVEEHRERYRNKRNQNQVFHVALVGYTNAGKSSWFNVLANEETYEKNQLFATL
DPKTRQIQINDGFNLIISDTVGFIQKLPTTLIVAFKSTLEEAKGADLLVHVVDSSHPEYRTQYDTVNDLIKQLDMNHISQ
IVIFNKKDLCDHASNRPASDLPNVFVSSKNDGDKLLVKTLFIDEIKRQLTYYDEAIATNNADRLYFLKQHTLVTELKYDE
IENVYRIKGFKNNKRTKFK

Sequences:

>Translated_419_residues
MAQQQIHDTKNKLEKAVLVGVHAQDDKQFNFESTMEELSSLSETCQLEVLGQITQNRDRVDRKYYVGKGKIEEIQAFIEF
KDIDVVITNDELTTAQSKSLNEALGVKIIDRTQLILEIFALRARSKEGKLQVELAQLDYLLSRLQGHGKSLSRLGGGIGT
RGPGETKLEMDRRHIRTRMNEIKHQLRTVEEHRERYRNKRNQNQVFHVALVGYTNAGKSSWFNVLANEETYEKNQLFATL
DPKTRQIQINDGFNLIISDTVGFIQKLPTTLIVAFKSTLEEAKGADLLVHVVDSSHPEYRTQYDTVNDLIKQLDMNHISQ
IVIFNKKDLCDHASNRPASDLPNVFVSSKNDGDKLLVKTLFIDEIKRQLTYYDEAIATNNADRLYFLKQHTLVTELKYDE
IENVYRIKGFKNNKRTKFK
>Mature_418_residues
AQQQIHDTKNKLEKAVLVGVHAQDDKQFNFESTMEELSSLSETCQLEVLGQITQNRDRVDRKYYVGKGKIEEIQAFIEFK
DIDVVITNDELTTAQSKSLNEALGVKIIDRTQLILEIFALRARSKEGKLQVELAQLDYLLSRLQGHGKSLSRLGGGIGTR
GPGETKLEMDRRHIRTRMNEIKHQLRTVEEHRERYRNKRNQNQVFHVALVGYTNAGKSSWFNVLANEETYEKNQLFATLD
PKTRQIQINDGFNLIISDTVGFIQKLPTTLIVAFKSTLEEAKGADLLVHVVDSSHPEYRTQYDTVNDLIKQLDMNHISQI
VIFNKKDLCDHASNRPASDLPNVFVSSKNDGDKLLVKTLFIDEIKRQLTYYDEAIATNNADRLYFLKQHTLVTELKYDEI
ENVYRIKGFKNNKRTKFK

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133116, Length=206, Percent_Identity=31.0679611650485, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI310124269, Length=198, Percent_Identity=31.3131313131313, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI310124267, Length=198, Percent_Identity=31.3131313131313, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI310124171, Length=198, Percent_Identity=31.3131313131313, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI310124169, Length=198, Percent_Identity=31.3131313131313, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI310133118, Length=206, Percent_Identity=30.5825242718447, Blast_Score=96, Evalue=7e-20,
Organism=Escherichia coli, GI1790615, Length=341, Percent_Identity=41.9354838709677, Blast_Score=252, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI17561038, Length=300, Percent_Identity=29, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24650079, Length=328, Percent_Identity=30.1829268292683, Blast_Score=125, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 48248; Mature: 48117

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQQQIHDTKNKLEKAVLVGVHAQDDKQFNFESTMEELSSLSETCQLEVLGQITQNRDRV
CCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DRKYYVGKGKIEEIQAFIEFKDIDVVITNDELTTAQSKSLNEALGVKIIDRTQLILEIFA
CCEEEECCCCHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHCEEEEHHHHHHHHHHH
LRARSKEGKLQVELAQLDYLLSRLQGHGKSLSRLGGGIGTRGPGETKLEMDRRHIRTRMN
HHHCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
EIKHQLRTVEEHRERYRNKRNQNQVFHVALVGYTNAGKSSWFNVLANEETYEKNQLFATL
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEE
DPKTRQIQINDGFNLIISDTVGFIQKLPTTLIVAFKSTLEEAKGADLLVHVVDSSHPEYR
CCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHH
TQYDTVNDLIKQLDMNHISQIVIFNKKDLCDHASNRPASDLPNVFVSSKNDGDKLLVKTL
HHHHHHHHHHHHHCHHHHCEEEEECCHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHH
FIDEIKRQLTYYDEAIATNNADRLYFLKQHTLVTELKYDEIENVYRIKGFKNNKRTKFK
HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHHHHHCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AQQQIHDTKNKLEKAVLVGVHAQDDKQFNFESTMEELSSLSETCQLEVLGQITQNRDRV
CCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
DRKYYVGKGKIEEIQAFIEFKDIDVVITNDELTTAQSKSLNEALGVKIIDRTQLILEIFA
CCEEEECCCCHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHHCEEEEHHHHHHHHHHH
LRARSKEGKLQVELAQLDYLLSRLQGHGKSLSRLGGGIGTRGPGETKLEMDRRHIRTRMN
HHHCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
EIKHQLRTVEEHRERYRNKRNQNQVFHVALVGYTNAGKSSWFNVLANEETYEKNQLFATL
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCEEEEE
DPKTRQIQINDGFNLIISDTVGFIQKLPTTLIVAFKSTLEEAKGADLLVHVVDSSHPEYR
CCCCEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHH
TQYDTVNDLIKQLDMNHISQIVIFNKKDLCDHASNRPASDLPNVFVSSKNDGDKLLVKTL
HHHHHHHHHHHHHCHHHHCEEEEECCHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHH
FIDEIKRQLTYYDEAIATNNADRLYFLKQHTLVTELKYDEIENVYRIKGFKNNKRTKFK
HHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCHHHHHCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]