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The map label for this gene is ynbB [H]

Identifier: 82750907

GI number: 82750907

Start: 1272081

End: 1273319

Strand: Direct

Name: ynbB [H]

Synonym: SAB1170

Alternate gene names: 82750907

Gene position: 1272081-1273319 (Clockwise)

Preceding gene: 82750906

Following gene: 82750908

Centisome position: 46.38

GC content: 35.35

Gene sequence:

>1239_bases
ATGAAAGATATAAGTAAGATAGTAGCTGACGTCGAATCAACGTTAGCACCATATTTTAAAGAAATTGAAGAAACTGCATA
TATTAATCAAGAAAAAGTATTAAATGCATTTCATCATGTCAAGGCAACCGAAAGTGATCTACAAGGATCAACAGGATACG
GGTATGATGATTTTGGACGTGATCATTTAGAAGAAATATATGCGCAGGCATTTAAAGCAGAAGATGCAATTGTTCGTCCG
CAAATTATTTCAGGTACGCATGCGATTACTATTGCATTACAAAGTTTATTAAAACATGGTGATGAATTAATTTATATAAC
GGGAAGTCCATATGACACTTTACTTGAAGTCATTGGTGTAAACGGAAATGGTATTGAAAGTTTAATGGAGCACGGCGTAT
CGTATAAAGATATAGCACTTAAAGAAGGTAAGATCGATATTGAAAGTGTGTTAGATGGGGTTTCTGAGCGCGCCAAAGTA
ATAGCGATTCAACGTTCGAAAGGCTATGATCAAAGACCTTCAATTCCTCTAGATGAAATTGAAGAGGTGATTACTAGGTT
GAAAGAAGTGCATCCTAATATTTTAATATTTGTGGATAACTGTTATGGGGAATTTGTTGAAAGACGTGAACCTATAGAAT
GTGGTGCCGATTTAATAGCAGGATCATTAATTAAAAACCCTGGCGGTGGTTTAGCTAAGATTGGTGGATACATTGCTGGT
AGAAAAGATTTAATTGAACGATGTGGTTATAGATTGACAGCACCTGGTATTGGTAAAGAAGCGGGTGCTTCATTAAATGC
ATTGCTTGAAATGTATCAAGGTTTCTTTTTAGCACCACACGTTGTCAGTCAGAGTCTTAAAGGAGCATTGTTTACTAGTT
TATTTTTAGAAAAAATGAATATGAACACAACGCCGAAGTACTACGAAAAACGAACTGATTTAATTCAAACAGTTAAATTT
AAAACGAAAGAACAAATGATTTCATTTTGTCAAAGTATTCAACACGCATCCCCAATTAATGCACATTTTAGTCCAGAACC
GAGTTATATGCCTGGTTACGAAGGTGATGTTATTATGGCAGCTGGTACGTTTATTCAAGGTTCATCGATTGAATTATCTG
CAGATGGACCTATTCGTCCTCCTTATGAAGCATATGTTCAAGGAGGATTAACATATGAACACGTTAAAATTGCTGTGACA
AGAGCTGTTAAGCAGTTGAAAGAACAAGGACTTATATAA

Upstream 100 bases:

>100_bases
TTCTAAAACAACATACATTAGTGACTGAACTTAAATATGATGAAATTGAAAATGTTTATCGTATAAAAGGATTTAAAAAT
AATAAAAGGACGAAATTCAA

Downstream 100 bases:

>100_bases
TAGATTAAATTTCACCCTAAATGATAAAGTGTTTTGGGTGAAATTTTTTTGCGAAGATTTATCAGATTATTTTTAAAAAT
TGAAAAAATATTTTAGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGRDHLEEIYAQAFKAEDAIVRP
QIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGVNGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERAKV
IAIQRSKGYDQRPSIPLDEIEEVITRLKEVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMNMNTTPKYYEKRTDLIQTVKF
KTKEQMISFCQSIQHASPINAHFSPEPSYMPGYEGDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVT
RAVKQLKEQGLI

Sequences:

>Translated_412_residues
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGRDHLEEIYAQAFKAEDAIVRP
QIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGVNGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERAKV
IAIQRSKGYDQRPSIPLDEIEEVITRLKEVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMNMNTTPKYYEKRTDLIQTVKF
KTKEQMISFCQSIQHASPINAHFSPEPSYMPGYEGDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVT
RAVKQLKEQGLI
>Mature_412_residues
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGRDHLEEIYAQAFKAEDAIVRP
QIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGVNGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERAKV
IAIQRSKGYDQRPSIPLDEIEEVITRLKEVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMNMNTTPKYYEKRTDLIQTVKF
KTKEQMISFCQSIQHASPINAHFSPEPSYMPGYEGDVIMAAGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVT
RAVKQLKEQGLI

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 45429; Mature: 45429

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCH
DHLEEIYAQAFKAEDAIVRPQIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGV
HHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCC
NGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERAKVIAIQRSKGYDQRPSIPLDEI
CCCCHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHH
EEVITRLKEVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
HHHHHHHHHHCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMN
HHHHHHHCCCEECCCCCCCHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
MNTTPKYYEKRTDLIQTVKFKTKEQMISFCQSIQHASPINAHFSPEPSYMPGYEGDVIMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
AGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVTRAVKQLKEQGLI
ECCEEECCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKDISKIVADVESTLAPYFKEIEETAYINQEKVLNAFHHVKATESDLQGSTGYGYDDFGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCH
DHLEEIYAQAFKAEDAIVRPQIISGTHAITIALQSLLKHGDELIYITGSPYDTLLEVIGV
HHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCC
NGNGIESLMEHGVSYKDIALKEGKIDIESVLDGVSERAKVIAIQRSKGYDQRPSIPLDEI
CCCCHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHH
EEVITRLKEVHPNILIFVDNCYGEFVERREPIECGADLIAGSLIKNPGGGLAKIGGYIAG
HHHHHHHHHHCCCEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
RKDLIERCGYRLTAPGIGKEAGASLNALLEMYQGFFLAPHVVSQSLKGALFTSLFLEKMN
HHHHHHHCCCEECCCCCCCHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC
MNTTPKYYEKRTDLIQTVKFKTKEQMISFCQSIQHASPINAHFSPEPSYMPGYEGDVIMA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
AGTFIQGSSIELSADGPIRPPYEAYVQGGLTYEHVKIAVTRAVKQLKEQGLI
ECCEEECCCEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]