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The map label for this gene is oppC [H]

Identifier: 82750605

GI number: 82750605

Start: 931549

End: 932568

Strand: Direct

Name: oppC [H]

Synonym: SAB0858

Alternate gene names: 82750605

Gene position: 931549-932568 (Clockwise)

Preceding gene: 82750604

Following gene: 82750606

Centisome position: 33.97

GC content: 30.29

Gene sequence:

>1020_bases
ATGGTGATTGATGAAAATAAAAAGCAATTGACTTCAACGGATTTTGAATTTAAAAAAGATAAAATAAATCAAGAATTTTT
AAACGTTAAAAATAAGAATTTTTGGCAAGATGGCTGGTCACAATTAAGAAAAAATAAATTAGCTGTTATAGGTATGATTG
GATTAATAATGATTATTTTATTTGCTTTATTTGCACCCGCAGTTTCTCAGCATAATAGTACTGAGCAGAATGTCACAGAT
AGAAATTTACCTTCGAAAATACCTCTGTTAGAAAAAGTTGATTATTTGCCTTTTAATGGGAAAGATGTTAACGGCAAAGA
TACTTATAAAGAGGTAGGTTCAAAAGATTATTACTTATTTGGAACCGATCAGTTGGGTCGAGATTTATGGTCGAGAACAT
GGGAAGGTGCACGAATATCATTATTTATTGGTGTGGTTGCTGCTATTTTAGATATATTTATTGGAGTTTTATTTGGTGCT
ATATCTGGTTTTTATGGTGGCAAATTAGATACTATCATGCAAAGAATTATAGAAATTATAGCTTCGATTCCTAATTTAAT
AATAGTAATTTTATTCGTATTAATCTTTGAGCCATCAATATGGACAATTATTTTAGCTATGTCAGTGACTGGATGGATTT
CAATGAGTAGAGTAGTAAGAGGAGAATTTCTTAAAATTAAAAATTTAGAATTTGTGCAAGCGTCAAAGACATTAGGGGCT
TCAAATTTGAGATTAATATTCAAACATATATTACCTAATACACTAGGTGCAATAATAGTTACTTCGATGTTCACAGTTCC
AAGCGCAATTTTTTTTGAAGCCTTTTTAAGTTTTATTGGAATTGGTGTACCTGCACCTCAAACATCATTAGGTTCGTTAG
TGAACGATGGTAAATCAATGCTATTAATTTATCCGCATGAGTTATTCATACCTGCAACAATTTTAAGTCTTTTAATTTTA
TTTTTCTATTTATTTAGTGATGGGCTGCGCGATGCGTTTGATCCTAAAATGCGTAAATAA

Upstream 100 bases:

>100_bases
ACTATTTTATTTAGTAGTTTTTTTATAGTGTCAATATTTTTAGTAGATATGTTATACATAATTATTGATCCAAGAATACG
CATCCAAGGAGGAAGAAATA

Downstream 100 bases:

>100_bases
GGGTGTGTTTTAATGATGAAAAAAGTATTGGAAGTAAAAAAATCTAGAAGTTTCTTTCGAAGTTGAAGATGGCATAGTTA
ATGCAGTGAGAGGAATTGAT

Product: peptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MVIDENKKQLTSTDFEFKKDKINQEFLNVKNKNFWQDGWSQLRKNKLAVIGMIGLIMIILFALFAPAVSQHNSTEQNVTD
RNLPSKIPLLEKVDYLPFNGKDVNGKDTYKEVGSKDYYLFGTDQLGRDLWSRTWEGARISLFIGVVAAILDIFIGVLFGA
ISGFYGGKLDTIMQRIIEIIASIPNLIIVILFVLIFEPSIWTIILAMSVTGWISMSRVVRGEFLKIKNLEFVQASKTLGA
SNLRLIFKHILPNTLGAIIVTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGKSMLLIYPHELFIPATILSLLIL
FFYLFSDGLRDAFDPKMRK

Sequences:

>Translated_339_residues
MVIDENKKQLTSTDFEFKKDKINQEFLNVKNKNFWQDGWSQLRKNKLAVIGMIGLIMIILFALFAPAVSQHNSTEQNVTD
RNLPSKIPLLEKVDYLPFNGKDVNGKDTYKEVGSKDYYLFGTDQLGRDLWSRTWEGARISLFIGVVAAILDIFIGVLFGA
ISGFYGGKLDTIMQRIIEIIASIPNLIIVILFVLIFEPSIWTIILAMSVTGWISMSRVVRGEFLKIKNLEFVQASKTLGA
SNLRLIFKHILPNTLGAIIVTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGKSMLLIYPHELFIPATILSLLIL
FFYLFSDGLRDAFDPKMRK
>Mature_339_residues
MVIDENKKQLTSTDFEFKKDKINQEFLNVKNKNFWQDGWSQLRKNKLAVIGMIGLIMIILFALFAPAVSQHNSTEQNVTD
RNLPSKIPLLEKVDYLPFNGKDVNGKDTYKEVGSKDYYLFGTDQLGRDLWSRTWEGARISLFIGVVAAILDIFIGVLFGA
ISGFYGGKLDTIMQRIIEIIASIPNLIIVILFVLIFEPSIWTIILAMSVTGWISMSRVVRGEFLKIKNLEFVQASKTLGA
SNLRLIFKHILPNTLGAIIVTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGKSMLLIYPHELFIPATILSLLIL
FFYLFSDGLRDAFDPKMRK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=315, Percent_Identity=37.7777777777778, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1787054, Length=304, Percent_Identity=29.9342105263158, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1787760, Length=295, Percent_Identity=31.5254237288136, Blast_Score=155, Evalue=5e-39,
Organism=Escherichia coli, GI1788505, Length=219, Percent_Identity=36.0730593607306, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1789964, Length=304, Percent_Identity=31.25, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=27.4590163934426, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787549, Length=301, Percent_Identity=21.5946843853821, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38118; Mature: 38118

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIDENKKQLTSTDFEFKKDKINQEFLNVKNKNFWQDGWSQLRKNKLAVIGMIGLIMIIL
CCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
FALFAPAVSQHNSTEQNVTDRNLPSKIPLLEKVDYLPFNGKDVNGKDTYKEVGSKDYYLF
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEE
GTDQLGRDLWSRTWEGARISLFIGVVAAILDIFIGVLFGAISGFYGGKLDTIMQRIIEII
ECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ASIPNLIIVILFVLIFEPSIWTIILAMSVTGWISMSRVVRGEFLKIKNLEFVQASKTLGA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCH
SNLRLIFKHILPNTLGAIIVTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGKSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCE
LLIYPHELFIPATILSLLILFFYLFSDGLRDAFDPKMRK
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVIDENKKQLTSTDFEFKKDKINQEFLNVKNKNFWQDGWSQLRKNKLAVIGMIGLIMIIL
CCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
FALFAPAVSQHNSTEQNVTDRNLPSKIPLLEKVDYLPFNGKDVNGKDTYKEVGSKDYYLF
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCEEEE
GTDQLGRDLWSRTWEGARISLFIGVVAAILDIFIGVLFGAISGFYGGKLDTIMQRIIEII
ECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ASIPNLIIVILFVLIFEPSIWTIILAMSVTGWISMSRVVRGEFLKIKNLEFVQASKTLGA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCH
SNLRLIFKHILPNTLGAIIVTSMFTVPSAIFFEAFLSFIGIGVPAPQTSLGSLVNDGKSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCE
LLIYPHELFIPATILSLLILFFYLFSDGLRDAFDPKMRK
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]