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The map label for this gene is oppB [H]

Identifier: 82750604

GI number: 82750604

Start: 930624

End: 931559

Strand: Direct

Name: oppB [H]

Synonym: SAB0857

Alternate gene names: 82750604

Gene position: 930624-931559 (Clockwise)

Preceding gene: 82750603

Following gene: 82750605

Centisome position: 33.93

GC content: 31.2

Gene sequence:

>936_bases
ATGATTAAATATTTTTTGAAGAGAATTTTTTATATGGCAATTTCATTAGTAATTATTACAACAATTACTTTTTTTCTAAT
GAAATTAATGCCTGGTTCACCTTTTAATGATGCTAAATTAAGTCCGGATCAAAAATATATTTTAAATGAGAAATATGGTT
TAAATGACCCTATATCAATACAATATTTAAATTACATGAAAAATGTATTTACAGGGGATTTTGGTTATTCTTTTCAGTAT
CATAATCAACCAGTGTGGGACATTATCAAACCAAGGTTAATCCCTTCTTTGGAAATGGGCATTACAGCAATGATAATAGG
AGTGTTGATTGGATTAATTTTAGGAGTTGCTTCTGCTGCAAAACAAAATACTTGGATAGATTATTGTGCAACACTTATAT
CAGTATTAGCAGTGTCTGTTCCTTCTTTAGTACTTGCAGTTTTATTACAATTTGTATTTGCAGTTAAATTGCGATGGTTT
CCTGTAGCTGGTTGGGAAGGCATTTCAACAGTTATACTGCCTTCTTTTGCGCTATCTGCTATTGTTATTGCGACAGTCAC
TAGATATATTCGTGCCGAACTTTTAGAGGTGTTAAAAAGTGATTATATACTGTTGGCTAGGGCAAAAGGTGTTCCTAATA
AAAGGGTTTTATATACACACGCTTTAAGAAATGCTCTTATCCCACTTGTAACAGTGTTAGTACCAATGATGGCTAGTATA
TTAACTGGTACATTAACTATTGAAAATATTTTTGGAGTCCCAGGGTTAGGAGATCAATTTGTACGTTCTATTGCCACAAA
TGATTTCCCAGTAATAATGGCTACAACTATTTTATTTAGTAGTTTTTTTATAGTGTCAATATTTTTAGTAGATATGTTAT
ACATAATTATTGATCCAAGAATACGCATCCAAGGAGGAAGAAATAATGGTGATTGA

Upstream 100 bases:

>100_bases
AAAAATGGGGAACAATAAAAAAATGTTGAAAATAAATAAAATAGCTATATAATAGTGTTAATATTCTGAAAATTTAGTTA
GATGGAGTGTATAGATTGCG

Downstream 100 bases:

>100_bases
TGAAAATAAAAAGCAATTGACTTCAACGGATTTTGAATTTAAAAAAGATAAAATAAATCAAGAATTTTTAAACGTTAAAA
ATAAGAATTTTTGGCAAGAT

Product: peptide ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MIKYFLKRIFYMAISLVIITTITFFLMKLMPGSPFNDAKLSPDQKYILNEKYGLNDPISIQYLNYMKNVFTGDFGYSFQY
HNQPVWDIIKPRLIPSLEMGITAMIIGVLIGLILGVASAAKQNTWIDYCATLISVLAVSVPSLVLAVLLQFVFAVKLRWF
PVAGWEGISTVILPSFALSAIVIATVTRYIRAELLEVLKSDYILLARAKGVPNKRVLYTHALRNALIPLVTVLVPMMASI
LTGTLTIENIFGVPGLGDQFVRSIATNDFPVIMATTILFSSFFIVSIFLVDMLYIIIDPRIRIQGGRNNGD

Sequences:

>Translated_311_residues
MIKYFLKRIFYMAISLVIITTITFFLMKLMPGSPFNDAKLSPDQKYILNEKYGLNDPISIQYLNYMKNVFTGDFGYSFQY
HNQPVWDIIKPRLIPSLEMGITAMIIGVLIGLILGVASAAKQNTWIDYCATLISVLAVSVPSLVLAVLLQFVFAVKLRWF
PVAGWEGISTVILPSFALSAIVIATVTRYIRAELLEVLKSDYILLARAKGVPNKRVLYTHALRNALIPLVTVLVPMMASI
LTGTLTIENIFGVPGLGDQFVRSIATNDFPVIMATTILFSSFFIVSIFLVDMLYIIIDPRIRIQGGRNNGD
>Mature_311_residues
MIKYFLKRIFYMAISLVIITTITFFLMKLMPGSPFNDAKLSPDQKYILNEKYGLNDPISIQYLNYMKNVFTGDFGYSFQY
HNQPVWDIIKPRLIPSLEMGITAMIIGVLIGLILGVASAAKQNTWIDYCATLISVLAVSVPSLVLAVLLQFVFAVKLRWF
PVAGWEGISTVILPSFALSAIVIATVTRYIRAELLEVLKSDYILLARAKGVPNKRVLYTHALRNALIPLVTVLVPMMASI
LTGTLTIENIFGVPGLGDQFVRSIATNDFPVIMATTILFSSFFIVSIFLVDMLYIIIDPRIRIQGGRNNGD

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=305, Percent_Identity=40.327868852459, Blast_Score=236, Evalue=1e-63,
Organism=Escherichia coli, GI1787053, Length=305, Percent_Identity=37.3770491803279, Blast_Score=204, Evalue=9e-54,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=31.4540059347181, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1789888, Length=315, Percent_Identity=32.3809523809524, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1787761, Length=337, Percent_Identity=29.673590504451, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788504, Length=365, Percent_Identity=24.3835616438356, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1787550, Length=269, Percent_Identity=24.907063197026, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34715; Mature: 34715

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKYFLKRIFYMAISLVIITTITFFLMKLMPGSPFNDAKLSPDQKYILNEKYGLNDPISI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHH
QYLNYMKNVFTGDFGYSFQYHNQPVWDIIKPRLIPSLEMGITAMIIGVLIGLILGVASAA
HHHHHHHHHHCCCCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KQNTWIDYCATLISVLAVSVPSLVLAVLLQFVFAVKLRWFPVAGWEGISTVILPSFALSA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHH
IVIATVTRYIRAELLEVLKSDYILLARAKGVPNKRVLYTHALRNALIPLVTVLVPMMASI
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGTLTIENIFGVPGLGDQFVRSIATNDFPVIMATTILFSSFFIVSIFLVDMLYIIIDPR
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IRIQGGRNNGD
EEEECCCCCCC
>Mature Secondary Structure
MIKYFLKRIFYMAISLVIITTITFFLMKLMPGSPFNDAKLSPDQKYILNEKYGLNDPISI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHH
QYLNYMKNVFTGDFGYSFQYHNQPVWDIIKPRLIPSLEMGITAMIIGVLIGLILGVASAA
HHHHHHHHHHCCCCCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KQNTWIDYCATLISVLAVSVPSLVLAVLLQFVFAVKLRWFPVAGWEGISTVILPSFALSA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHH
IVIATVTRYIRAELLEVLKSDYILLARAKGVPNKRVLYTHALRNALIPLVTVLVPMMASI
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGTLTIENIFGVPGLGDQFVRSIATNDFPVIMATTILFSSFFIVSIFLVDMLYIIIDPR
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IRIQGGRNNGD
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]