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The map label for this gene is capA

Identifier: 82749862

GI number: 82749862

Start: 112353

End: 113021

Strand: Direct

Name: capA

Synonym: SAB0090

Alternate gene names: 82749862

Gene position: 112353-113021 (Clockwise)

Preceding gene: 82749861

Following gene: 82749863

Centisome position: 4.1

GC content: 29.45

Gene sequence:

>669_bases
ATGGAAAGTACATTAGAATTAACAAAAATTAAAGAAGTATTACAAAAAAACTTGAAGATTTTAATTATTTTACCGCTATT
ATTTTTAATTATTAGCGCTATTGTTACATTTTTCGTCTTATCACCTAAATATCAAGCTAATACTCAAATTTTAGTGAATC
AAACTAAGGGTGACAATCCTCAGTTTATGGCGCAAGAGGTTCAAAGTAATATTCAACTTGTAAATACGTATAAAGAAATT
TTTAAAAGTCCTAGAATTTTAGATGAGGTGTCAAAGGACTTAGATGATAAGTATTCACCATCTAAATTATCGAGTATGTT
GACAATTACAAACCAAGAAAATACACAACTTATCAACATCCAAGTTAAAAGTGGTCATAAACAAGATTCGGAAAAAATTG
CGAATAGCTTCGCTAAAGTTACAAGTAAACAAATTCCGAAGATTATGAGTGTGGATAACGTATCAATTTTATCTAAAGCA
GACGGTACAGCAGTTAAAGTCGCACCAAAAACTGTAGTGAATCTAATCGGTGCATTCTTTTTAGGATTAGTTGTTGCGCT
TATATATATCTTCTTCAAAGTAATTTTCGATAAGCGAATTAAAGATGAAGAAGATGTAGAGAAAGAATTAGGATTGCCTG
TATTGGGTTCAATTCAAAAATTTAATTAA

Upstream 100 bases:

>100_bases
AATGCGGTTTAAAAGTAATTAATTGTTTAAACGATATGTAATATGTAAATACTATATATATAATACCAATTTTAATGAAA
ATTTTTAAGGGAGGTAAATA

Downstream 100 bases:

>100_bases
GGATGGTTGCTACTTATGTCAAAAAAGGAAAATACGACAACAACACTATTTGTGTATGAAAAACCAAAATCAACAATTAG
TGAAAAATTTCGAGGTATAC

Product: capsular polysaccharide synthesis enzyme CapA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEI
FKSPRILDEVSKDLDDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKA
DGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN

Sequences:

>Translated_222_residues
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEI
FKSPRILDEVSKDLDDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKA
DGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN
>Mature_222_residues
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEI
FKSPRILDEVSKDLDDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKA
DGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN

Specific function: Required for the biosynthesis of type 5 capsular polysaccharide (Cap5/CP5). Might act as the chain-length regulator [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856
- InterPro:   IPR005701 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 24904; Mature: 24904

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNP
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
QFMAQEVQSNIQLVNTYKEIFKSPRILDEVSKDLDDKYSPSKLSSMLTITNQENTQLINI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCEEEEE
QVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFF
EECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCCCCCCEEEECHHHHHHHHHHHH
LGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCCCCCC
>Mature Secondary Structure
MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNP
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCH
QFMAQEVQSNIQLVNTYKEIFKSPRILDEVSKDLDDKYSPSKLSSMLTITNQENTQLINI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCEEEEE
QVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFF
EECCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHCCCCCCEEEECHHHHHHHHHHHH
LGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9245821 [H]