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The map label for this gene is capB

Identifier: 82749863

GI number: 82749863

Start: 113037

End: 113723

Strand: Direct

Name: capB

Synonym: SAB0091

Alternate gene names: 82749863

Gene position: 113037-113723 (Clockwise)

Preceding gene: 82749862

Following gene: 82749864

Centisome position: 4.12

GC content: 32.9

Gene sequence:

>687_bases
ATGTCAAAAAAGGAAAATACGACAACAACACTATTTGTGTATGAAAAACCAAAATCAACAATTAGTGAAAAATTTCGAGG
TATACGTTCAAACATCATGTTTTCAAAAGCAAATGGTGAAGTAAAGCGTTTGTTGGTTACTTCTGAAAAGCCTGGTGCAG
GTAAAAGTACAGTTGTATCGAATGTAGCGATTACTTATGCACAAGCAGGCTATAAGACGTTAGTTATTGACGGCGATATG
CGTAAACCAACACAAAATTATATTTTTAATGAGCAAAATAATAATGGACTATCAAGCTTGATCATTGGTAGAACGACTAT
GTCAGAAGCAATTACGTCGACAGAAATTGATAATTTAGATTTACTAACAGCTGGTCCTGTACCTCCAAATCCATCTGAGT
TAATTGGGTCTGAAAGGTTCAAAGAATTAGTTGATATGTTTAATAAACGTTACGACATTATTATTGTCGATACACCGCCA
GTTAATACCGTGACTGATGCACAACTATATGCGCGTGCTATTAAAGATAGTCTGTTAGTAATTGATAGTGAAAAAAATGA
TAAAAATGAAGTTAAAAAAGCTAAAACACTTATGGAAAAAGCAGGCAGTAACATTCTAGGCGTCATTTTAAATAAGGCAA
AAGTAGATAAATCTTCTAGTTATTATCACTATTATGGAGATGAATAA

Upstream 100 bases:

>100_bases
TTTCGATAAGCGAATTAAAGATGAAGAAGATGTAGAGAAAGAATTAGGATTGCCTGTATTGGGTTCAATTCAAAAATTTA
ATTAAGGATGGTTGCTACTT

Downstream 100 bases:

>100_bases
GTATGATTGATATTCATAACCATATATTGCCTAATATCGATGACGGTCCGACAAATGAAACAGAGATGCTGGATCTTTTA
AAACAAGCGACAACACAAGG

Product: capsular polysaccharide synthesis enzyme CapB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDM
RKPTQNYIFNEQNNNGLSSLIIGRTTMSEAITSTEIDNLDLLTAGPVPPNPSELIGSERFKELVDMFNKRYDIIIVDTPP
VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKTLMEKAGSNILGVILNKAKVDKSSSYYHYYGDE

Sequences:

>Translated_228_residues
MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDM
RKPTQNYIFNEQNNNGLSSLIIGRTTMSEAITSTEIDNLDLLTAGPVPPNPSELIGSERFKELVDMFNKRYDIIIVDTPP
VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKTLMEKAGSNILGVILNKAKVDKSSSYYHYYGDE
>Mature_227_residues
SKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMR
KPTQNYIFNEQNNNGLSSLIIGRTTMSEAITSTEIDNLDLLTAGPVPPNPSELIGSERFKELVDMFNKRYDIIIVDTPPV
NTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKTLMEKAGSNILGVILNKAKVDKSSSYYHYYGDE

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG0489

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Inner membrane (Probable) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsD/CapB family [H]

Homologues:

Organism=Escherichia coli, GI87082032, Length=218, Percent_Identity=35.7798165137615, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1787216, Length=201, Percent_Identity=35.3233830845771, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR005702 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: =2.7.10.2 [H]

Molecular weight: Translated: 25289; Mature: 25158

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVS
CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCHHHHH
NVAITYAQAGYKTLVIDGDMRKPTQNYIFNEQNNNGLSSLIIGRTTMSEAITSTEIDNLD
HHEEEEECCCCEEEEEECCCCCCHHHCEEECCCCCCCHHEEEEHHHHHHHHHHCCCCCEE
LLTAGPVPPNPSELIGSERFKELVDMFNKRYDIIIVDTPPVNTVTDAQLYARAIKDSLLV
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEE
IDSEKNDKNEVKKAKTLMEKAGSNILGVILNKAKVDKSSSYYHYYGDE
EECCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCEEEEECCC
>Mature Secondary Structure 
SKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVS
CCCCCCEEEEEEEECCHHHHHHHHHHHHHHEEEECCCCCEEEEEEECCCCCCCCHHHHH
NVAITYAQAGYKTLVIDGDMRKPTQNYIFNEQNNNGLSSLIIGRTTMSEAITSTEIDNLD
HHEEEEECCCCEEEEEECCCCCCHHHCEEECCCCCCCHHEEEEHHHHHHHHHHCCCCCEE
LLTAGPVPPNPSELIGSERFKELVDMFNKRYDIIIVDTPPVNTVTDAQLYARAIKDSLLV
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEE
IDSEKNDKNEVKKAKTLMEKAGSNILGVILNKAKVDKSSSYYHYYGDE
EECCCCCHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]