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The map label for this gene is yrbD [C]

Identifier: 82703860

GI number: 82703860

Start: 3150470

End: 3150955

Strand: Reverse

Name: yrbD [C]

Synonym: Nmul_A2747

Alternate gene names: 82703860

Gene position: 3150955-3150470 (Counterclockwise)

Preceding gene: 82703861

Following gene: 82703859

Centisome position: 98.95

GC content: 51.85

Gene sequence:

>486_bases
ATGCAGCGCGCAACAATGGATTTGTGGGTAGGACTGTTCGTCATGGCAGGTATCGGCGCATTGCTCGTGCTGGCGTTGAA
AGTCGGCAATCTTGGTACTTATAGCGCGAGTGACAGCTATCAGGTGACAGGCAACTTCGAAAACATCGGAGGGTTGAAAG
TGCGGGCGCCGGTAAAGAGTGCCGGTGTCGTCGTCGGCCGGGTGACGGACATCCGGTTCAGCACGGAGACATATGACGCT
CTGGTGATCATGAATATTGACAGCCGTTATAAATTTCCCAAGGATACTTTTGCCAGCATCCTTACCTCCGGTTTGATCGG
GGAGCAATATATCGGCCTGGCTGCCGGGGGGGATGAAGCGACGCTCAAGGATGGCGACACCATCATGAAAACCAATTCTG
CCCTTGTTCTGGAAGAAATGATCGGGAAATTTTTGTTCAATAAGGCCTCAGAAGGAGGCAGCAGTGAAAATTCCGACAAG
AACTAG

Upstream 100 bases:

>100_bases
GCGTATCCGGTGCCACAACCCGCACCGTGGTGACTTCTTCACTCGCAATTCTTGGACTCGATTTTATCTTGACCTCGTTC
ATGTTCAGGGGAATGGGCTG

Downstream 100 bases:

>100_bases
AAAGGGCAGTAACAAGTCCAACGCCTGCGGTGGCTCCGTGTCCCGTATTTCACGGATAAGGGCCTGCGGGCAGGAAGCAG
GAGCAGTTGATGCGGGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQRATMDLWVGLFVMAGIGALLVLALKVGNLGTYSASDSYQVTGNFENIGGLKVRAPVKSAGVVVGRVTDIRFSTETYDA
LVIMNIDSRYKFPKDTFASILTSGLIGEQYIGLAAGGDEATLKDGDTIMKTNSALVLEEMIGKFLFNKASEGGSSENSDK
N

Sequences:

>Translated_161_residues
MQRATMDLWVGLFVMAGIGALLVLALKVGNLGTYSASDSYQVTGNFENIGGLKVRAPVKSAGVVVGRVTDIRFSTETYDA
LVIMNIDSRYKFPKDTFASILTSGLIGEQYIGLAAGGDEATLKDGDTIMKTNSALVLEEMIGKFLFNKASEGGSSENSDK
N
>Mature_161_residues
MQRATMDLWVGLFVMAGIGALLVLALKVGNLGTYSASDSYQVTGNFENIGGLKVRAPVKSAGVVVGRVTDIRFSTETYDA
LVIMNIDSRYKFPKDTFASILTSGLIGEQYIGLAAGGDEATLKDGDTIMKTNSALVLEEMIGKFLFNKASEGGSSENSDK
N

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=164, Percent_Identity=45.1219512195122, Blast_Score=126, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 17130; Mature: 17130

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRATMDLWVGLFVMAGIGALLVLALKVGNLGTYSASDSYQVTGNFENIGGLKVRAPVKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEECCCCC
AGVVVGRVTDIRFSTETYDALVIMNIDSRYKFPKDTFASILTSGLIGEQYIGLAAGGDEA
CCEEEEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHEEEEECCCCC
TLKDGDTIMKTNSALVLEEMIGKFLFNKASEGGSSENSDKN
EECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRATMDLWVGLFVMAGIGALLVLALKVGNLGTYSASDSYQVTGNFENIGGLKVRAPVKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEECCCCC
AGVVVGRVTDIRFSTETYDALVIMNIDSRYKFPKDTFASILTSGLIGEQYIGLAAGGDEA
CCEEEEEEEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCHHEEEEECCCCC
TLKDGDTIMKTNSALVLEEMIGKFLFNKASEGGSSENSDKN
EECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]