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The map label for this gene is 82703743

Identifier: 82703743

GI number: 82703743

Start: 3013367

End: 3014029

Strand: Reverse

Name: 82703743

Synonym: Nmul_A2630

Alternate gene names: NA

Gene position: 3014029-3013367 (Counterclockwise)

Preceding gene: 82703747

Following gene: 82703739

Centisome position: 94.65

GC content: 56.11

Gene sequence:

>663_bases
ATGCAAGGCATCAAGCTAATTTCGATGATTACCGCATCGGCTGTATTGGCCCTGTCCAGCCATGTTTTTGCGGAAACGCC
TCCCCAGCCTGTCAAAACGGCAGGAGATGCGGCTAAAGGCCAGCAAATCGCCTCCCAGGTTTGCGCCGCCTGTCATGGTG
CGGATGGCAACAGTATGATTCCTGCAAATCCCAATCTGGCGGGGCAGCATGCCGAGTATATCATCAAGCAGCTCAATAAT
TTCAAGTCGCAGGACGGCAAGCCGGCAGAGCGCGATAGCGCGGTGATGTCAGCGATGGTTGCGCCGCTTTCCGACGAGGA
TGCAAGGAATCTCGCAGCTTACTACGCTCAGCAGAAGCCCAAGCCCGGGGTGGCCAACAACAAGGAACTCGCCGAGCTGG
GGGAAAAAATATATCGCGGCGGAAATCTTGAAACCAATGTTCCCGCCTGCTCCAGTTGCCATTCCCCTAACGGCGCCGGC
ATTCCTCCCGTTTATCCCCAGCTCGCCGGGCAGCATGCAGAGTATTCTGCTACGCAGCTGCGTGCATTCCGGACCGAGCA
GCGGGCAAACGATGCGAACAAGGTTATGCACGTGATCGCAACGCGGATGAGCGAAAAAGAAATGGAGGCGGTATCCGAGT
TTATTTCGGGTCTGCGCAAGTAA

Upstream 100 bases:

>100_bases
TACGGATAAGGTTATTGTTGTTATATTGTTGTTATACGGCCTTTGCCTTAAAATGCGCAGTCAAATCAAAATACCAATTA
CTTTCTTCGGAGTCTCAGGA

Downstream 100 bases:

>100_bases
TAAAAAAAGTCGGGGATTCCGAAGTTATCGCGGAATTATCGCAGAGGGCGCTGCCGGTAAAATCGGGATGACCGGGATGG
CTATAGGGCCCGGATACGGT

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MQGIKLISMITASAVLALSSHVFAETPPQPVKTAGDAAKGQQIASQVCAACHGADGNSMIPANPNLAGQHAEYIIKQLNN
FKSQDGKPAERDSAVMSAMVAPLSDEDARNLAAYYAQQKPKPGVANNKELAELGEKIYRGGNLETNVPACSSCHSPNGAG
IPPVYPQLAGQHAEYSATQLRAFRTEQRANDANKVMHVIATRMSEKEMEAVSEFISGLRK

Sequences:

>Translated_220_residues
MQGIKLISMITASAVLALSSHVFAETPPQPVKTAGDAAKGQQIASQVCAACHGADGNSMIPANPNLAGQHAEYIIKQLNN
FKSQDGKPAERDSAVMSAMVAPLSDEDARNLAAYYAQQKPKPGVANNKELAELGEKIYRGGNLETNVPACSSCHSPNGAG
IPPVYPQLAGQHAEYSATQLRAFRTEQRANDANKVMHVIATRMSEKEMEAVSEFISGLRK
>Mature_220_residues
MQGIKLISMITASAVLALSSHVFAETPPQPVKTAGDAAKGQQIASQVCAACHGADGNSMIPANPNLAGQHAEYIIKQLNN
FKSQDGKPAERDSAVMSAMVAPLSDEDARNLAAYYAQQKPKPGVANNKELAELGEKIYRGGNLETNVPACSSCHSPNGAG
IPPVYPQLAGQHAEYSATQLRAFRTEQRANDANKVMHVIATRMSEKEMEAVSEFISGLRK

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor in an anaerobic electron transport chain [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 23403; Mature: 23403

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGIKLISMITASAVLALSSHVFAETPPQPVKTAGDAAKGQQIASQVCAACHGADGNSMI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
PANPNLAGQHAEYIIKQLNNFKSQDGKPAERDSAVMSAMVAPLSDEDARNLAAYYAQQKP
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
KPGVANNKELAELGEKIYRGGNLETNVPACSSCHSPNGAGIPPVYPQLAGQHAEYSATQL
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHH
RAFRTEQRANDANKVMHVIATRMSEKEMEAVSEFISGLRK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGIKLISMITASAVLALSSHVFAETPPQPVKTAGDAAKGQQIASQVCAACHGADGNSMI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCC
PANPNLAGQHAEYIIKQLNNFKSQDGKPAERDSAVMSAMVAPLSDEDARNLAAYYAQQKP
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
KPGVANNKELAELGEKIYRGGNLETNVPACSSCHSPNGAGIPPVYPQLAGQHAEYSATQL
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHH
RAFRTEQRANDANKVMHVIATRMSEKEMEAVSEFISGLRK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA