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The map label for this gene is visC [H]

Identifier: 82703559

GI number: 82703559

Start: 2792058

End: 2793227

Strand: Direct

Name: visC [H]

Synonym: Nmul_A2444

Alternate gene names: 82703559

Gene position: 2792058-2793227 (Clockwise)

Preceding gene: 82703557

Following gene: 82703560

Centisome position: 87.68

GC content: 58.97

Gene sequence:

>1170_bases
ATGAAATTCGATGTCGTTATCGTGGGGGGCGGATTGGTTGGGGCAAGCCTGGCGCTTGCCCTCAAGGATAGCGGCCTGGA
AATAGCGCTGGTTGAATTCCGCCCCGTACCGCCACTTCCCGCCGATGAGAGCTGGGACAGCAGAGTCTACGCCATCAGTC
CGGGCAGCGCTGCATTCCTGCAAAACCTGGGAGTGTGGGACGCTCTCGATCAGGAGCGTGTGACTCCTGTTTACAATATG
TCAGTCTTCGGTGACGACAACGCCGCGCGGCTGGATTTCAGCGCCTACAATATCGGTGTCCCCGAACTGGCTTTCATAGT
GGAGAACCGCCAGCTCCAGCATGCCGCCTGGAGAGAGCTCAAATGCCCGGGAAATTCGATCAAGGTTTTTTGTCCCGCGC
AATGTTCCATGATGCTCCGGGCCGAGTCTAACGCCGAGCTGCATCTCGATGATGGAACTGTCGTGCAGGCGGGGTTGATC
GTTGGGGCGGACGGAGGGAATTCCTGGGTACGCGAACAGGCAGGTATTGAAGTATCGCGGCATTCCTACCAGCAAATGGG
CTTGGTGGCAAACTTCGAGGCAACGCGCCCTCATAATAACGTCGCCCACCAGTGGTTTCGGCGCGATGGCGTGCTGGCGC
TGCTGCCGATGCCCGGGAGGCTGGTGTCCATGGTATGGTCTGCAAGGGAAGAACTCGCGCAAACGATGCTCGCGCTACCT
GAAAAGGAACTATGCGAGCGCGTCGTCCGGGCCTCGCAACATTCCCTGGGCGAGATGCGGCTCGTTACGCGCCCTGCCGC
TTTTCCCCTGAATTTTGTACATGTGAAAAAGCTGGCGCAGCCGCATCTTGCGCTCATCGGCGACGCAGCGCATGGCATCC
ATCCTCTTGCGGGACAGGGCGTGAATCTCGGTTTACGCGACGCGCAGGAACTCGCCTCTGTCATCCGCTCGCGCGGCCTG
CAATCGGATTGCGGGGATTACCTGTTGCTGCGCCGCTATGAGCGCGCCCGCAAGGAAGACATCCTGGCCATGGAGCTGGT
TACCGACGGCTTGCAGAAGCTGTTCAACCACACTCACCCGACGCTCATTCGCCTGCGCAATCTGGGTCTGGAAATCACCA
ACCGGTTGCCTCTGATAAAAGACCGCTTGATGCAGCAGGCATTAAGTTGA

Upstream 100 bases:

>100_bases
GAAGCGTAGCTGTTGTTCATAAATCCAACGAGGCGGAAAACGGACGTTCCGCCTTATCCATGCACCCCCGCGCAAGGGAA
AGCGGCTGTATAATGGTTCC

Downstream 100 bases:

>100_bases
GCCCGGCTGATTCTTTTTCCTTTCCATCCCATCAGAACACCACCTACACAACTACGGGGCCGTCCGGCTGCATCCCATCC
CAAAACGGAGTAAAGACCAT

Product: ubiquinone biosynthesis hydroxylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKFDVVIVGGGLVGASLALALKDSGLEIALVEFRPVPPLPADESWDSRVYAISPGSAAFLQNLGVWDALDQERVTPVYNM
SVFGDDNAARLDFSAYNIGVPELAFIVENRQLQHAAWRELKCPGNSIKVFCPAQCSMMLRAESNAELHLDDGTVVQAGLI
VGADGGNSWVREQAGIEVSRHSYQQMGLVANFEATRPHNNVAHQWFRRDGVLALLPMPGRLVSMVWSAREELAQTMLALP
EKELCERVVRASQHSLGEMRLVTRPAAFPLNFVHVKKLAQPHLALIGDAAHGIHPLAGQGVNLGLRDAQELASVIRSRGL
QSDCGDYLLLRRYERARKEDILAMELVTDGLQKLFNHTHPTLIRLRNLGLEITNRLPLIKDRLMQQALS

Sequences:

>Translated_389_residues
MKFDVVIVGGGLVGASLALALKDSGLEIALVEFRPVPPLPADESWDSRVYAISPGSAAFLQNLGVWDALDQERVTPVYNM
SVFGDDNAARLDFSAYNIGVPELAFIVENRQLQHAAWRELKCPGNSIKVFCPAQCSMMLRAESNAELHLDDGTVVQAGLI
VGADGGNSWVREQAGIEVSRHSYQQMGLVANFEATRPHNNVAHQWFRRDGVLALLPMPGRLVSMVWSAREELAQTMLALP
EKELCERVVRASQHSLGEMRLVTRPAAFPLNFVHVKKLAQPHLALIGDAAHGIHPLAGQGVNLGLRDAQELASVIRSRGL
QSDCGDYLLLRRYERARKEDILAMELVTDGLQKLFNHTHPTLIRLRNLGLEITNRLPLIKDRLMQQALS
>Mature_389_residues
MKFDVVIVGGGLVGASLALALKDSGLEIALVEFRPVPPLPADESWDSRVYAISPGSAAFLQNLGVWDALDQERVTPVYNM
SVFGDDNAARLDFSAYNIGVPELAFIVENRQLQHAAWRELKCPGNSIKVFCPAQCSMMLRAESNAELHLDDGTVVQAGLI
VGADGGNSWVREQAGIEVSRHSYQQMGLVANFEATRPHNNVAHQWFRRDGVLALLPMPGRLVSMVWSAREELAQTMLALP
EKELCERVVRASQHSLGEMRLVTRPAAFPLNFVHVKKLAQPHLALIGDAAHGIHPLAGQGVNLGLRDAQELASVIRSRGL
QSDCGDYLLLRRYERARKEDILAMELVTDGLQKLFNHTHPTLIRLRNLGLEITNRLPLIKDRLMQQALS

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=408, Percent_Identity=31.1274509803922, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI32967307, Length=380, Percent_Identity=30.7894736842105, Blast_Score=144, Evalue=1e-34,
Organism=Escherichia coli, GI1789273, Length=387, Percent_Identity=38.5012919896641, Blast_Score=253, Evalue=1e-68,
Organism=Escherichia coli, GI1786883, Length=387, Percent_Identity=34.625322997416, Blast_Score=206, Evalue=3e-54,
Organism=Escherichia coli, GI1789274, Length=393, Percent_Identity=30.7888040712468, Blast_Score=176, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI25146631, Length=436, Percent_Identity=30.9633027522936, Blast_Score=180, Evalue=9e-46,
Organism=Saccharomyces cerevisiae, GI6321694, Length=457, Percent_Identity=25.601750547046, Blast_Score=106, Evalue=6e-24,
Organism=Drosophila melanogaster, GI19920760, Length=434, Percent_Identity=33.6405529953917, Blast_Score=170, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42935; Mature: 42935

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDVVIVGGGLVGASLALALKDSGLEIALVEFRPVPPLPADESWDSRVYAISPGSAAFL
CEEEEEEECCCHHHHHEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHH
QNLGVWDALDQERVTPVYNMSVFGDDNAARLDFSAYNIGVPELAFIVENRQLQHAAWREL
HHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHH
KCPGNSIKVFCPAQCSMMLRAESNAELHLDDGTVVQAGLIVGADGGNSWVREQAGIEVSR
CCCCCCEEEEECCCCEEEEEECCCCEEEECCCCEEEEEEEEECCCCCHHHHHHCCCCHHH
HSYQQMGLVANFEATRPHNNVAHQWFRRDGVLALLPMPGRLVSMVWSAREELAQTMLALP
HHHHHCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCC
EKELCERVVRASQHSLGEMRLVTRPAAFPLNFVHVKKLAQPHLALIGDAAHGIHPLAGQG
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCC
VNLGLRDAQELASVIRSRGLQSDCGDYLLLRRYERARKEDILAMELVTDGLQKLFNHTHP
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TLIRLRNLGLEITNRLPLIKDRLMQQALS
HEEHHHHCCCHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKFDVVIVGGGLVGASLALALKDSGLEIALVEFRPVPPLPADESWDSRVYAISPGSAAFL
CEEEEEEECCCHHHHHEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCHHHH
QNLGVWDALDQERVTPVYNMSVFGDDNAARLDFSAYNIGVPELAFIVENRQLQHAAWREL
HHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHHHHH
KCPGNSIKVFCPAQCSMMLRAESNAELHLDDGTVVQAGLIVGADGGNSWVREQAGIEVSR
CCCCCCEEEEECCCCEEEEEECCCCEEEECCCCEEEEEEEEECCCCCHHHHHHCCCCHHH
HSYQQMGLVANFEATRPHNNVAHQWFRRDGVLALLPMPGRLVSMVWSAREELAQTMLALP
HHHHHCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCC
EKELCERVVRASQHSLGEMRLVTRPAAFPLNFVHVKKLAQPHLALIGDAAHGIHPLAGQG
HHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCC
VNLGLRDAQELASVIRSRGLQSDCGDYLLLRRYERARKEDILAMELVTDGLQKLFNHTHP
CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TLIRLRNLGLEITNRLPLIKDRLMQQALS
HEEHHHHCCCHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]